data_4X6J # _model_server_result.job_id Hg8cEZrBrc8h0NMwUw_BQw _model_server_result.datetime_utc '2024-11-27 06:34:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 4X6J # _exptl.entry_id 4X6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-1,2-PROPANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.42 _cell.angle_gamma 90 _cell.entry_id 4X6J _cell.length_a 47.219 _cell.length_b 44.403 _cell.length_c 51.354 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? disulf ? disulf3 A SG CYS 155 A CYS 155 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A SG CYS 25 A CYS 25 1_555 H C1 3Y2 . A 3Y2 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.664 ? metalc ? metalc1 A O ALA 197 A ALA 197 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? metalc ? metalc2 A O ALA 203 A ALA 203 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? metalc ? metalc3 D K K . A K 303 1_555 I O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id PGO _chem_comp.mon_nstd_flag . _chem_comp.name S-1,2-PROPANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGO sing 295 n n C1 O1 PGO sing 296 n n C1 H11 PGO sing 297 n n C1 H12 PGO sing 298 n n C2 C3 PGO sing 299 n n C2 O2 PGO sing 300 n n C2 H2 PGO sing 301 n n C3 H31 PGO sing 302 n n C3 H32 PGO sing 303 n n C3 H33 PGO sing 304 n n O1 HO1 PGO sing 305 n n O2 HO2 PGO sing 306 n n # _atom_sites.entry_id 4X6J _atom_sites.fract_transf_matrix[1][1] 0.021178 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.01052 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022521 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 1 GOL GOL . C 3 CL A 1 302 2 CL CL . D 4 K A 1 303 3 K K . E 5 PGO A 1 304 4 PGO PGO . F 5 PGO A 1 305 5 PGO PGO . G 5 PGO A 1 306 6 PGO PGO . H 6 3Y2 A 1 307 1 3Y2 27A . I 7 HOH A 1 401 170 HOH HOH . I 7 HOH A 2 402 59 HOH HOH . I 7 HOH A 3 403 220 HOH HOH . I 7 HOH A 4 404 167 HOH HOH . I 7 HOH A 5 405 119 HOH HOH . I 7 HOH A 6 406 230 HOH HOH . I 7 HOH A 7 407 111 HOH HOH . I 7 HOH A 8 408 98 HOH HOH . I 7 HOH A 9 409 120 HOH HOH . I 7 HOH A 10 410 209 HOH HOH . I 7 HOH A 11 411 202 HOH HOH . I 7 HOH A 12 412 48 HOH HOH . I 7 HOH A 13 413 163 HOH HOH . I 7 HOH A 14 414 76 HOH HOH . I 7 HOH A 15 415 231 HOH HOH . I 7 HOH A 16 416 179 HOH HOH . I 7 HOH A 17 417 68 HOH HOH . I 7 HOH A 18 418 166 HOH HOH . I 7 HOH A 19 419 129 HOH HOH . I 7 HOH A 20 420 105 HOH HOH . I 7 HOH A 21 421 155 HOH HOH . I 7 HOH A 22 422 205 HOH HOH . I 7 HOH A 23 423 131 HOH HOH . I 7 HOH A 24 424 190 HOH HOH . I 7 HOH A 25 425 36 HOH HOH . I 7 HOH A 26 426 9 HOH HOH . I 7 HOH A 27 427 81 HOH HOH . I 7 HOH A 28 428 54 HOH HOH . I 7 HOH A 29 429 211 HOH HOH . I 7 HOH A 30 430 189 HOH HOH . I 7 HOH A 31 431 60 HOH HOH . I 7 HOH A 32 432 152 HOH HOH . I 7 HOH A 33 433 178 HOH HOH . I 7 HOH A 34 434 106 HOH HOH . I 7 HOH A 35 435 27 HOH HOH . I 7 HOH A 36 436 5 HOH HOH . I 7 HOH A 37 437 37 HOH HOH . I 7 HOH A 38 438 216 HOH HOH . I 7 HOH A 39 439 82 HOH HOH . I 7 HOH A 40 440 148 HOH HOH . I 7 HOH A 41 441 110 HOH HOH . I 7 HOH A 42 442 214 HOH HOH . I 7 HOH A 43 443 55 HOH HOH . I 7 HOH A 44 444 20 HOH HOH . I 7 HOH A 45 445 149 HOH HOH . I 7 HOH A 46 446 16 HOH HOH . I 7 HOH A 47 447 67 HOH HOH . I 7 HOH A 48 448 80 HOH HOH . I 7 HOH A 49 449 186 HOH HOH . I 7 HOH A 50 450 104 HOH HOH . I 7 HOH A 51 451 14 HOH HOH . I 7 HOH A 52 452 56 HOH HOH . I 7 HOH A 53 453 95 HOH HOH . I 7 HOH A 54 454 206 HOH HOH . I 7 HOH A 55 455 100 HOH HOH . I 7 HOH A 56 456 47 HOH HOH . I 7 HOH A 57 457 173 HOH HOH . I 7 HOH A 58 458 33 HOH HOH . I 7 HOH A 59 459 4 HOH HOH . I 7 HOH A 60 460 25 HOH HOH . I 7 HOH A 61 461 185 HOH HOH . I 7 HOH A 62 462 31 HOH HOH . I 7 HOH A 63 463 43 HOH HOH . I 7 HOH A 64 464 87 HOH HOH . I 7 HOH A 65 465 116 HOH HOH . I 7 HOH A 66 466 118 HOH HOH . I 7 HOH A 67 467 207 HOH HOH . I 7 HOH A 68 468 199 HOH HOH . I 7 HOH A 69 469 93 HOH HOH . I 7 HOH A 70 470 11 HOH HOH . I 7 HOH A 71 471 7 HOH HOH . I 7 HOH A 72 472 26 HOH HOH . I 7 HOH A 73 473 102 HOH HOH . I 7 HOH A 74 474 12 HOH HOH . I 7 HOH A 75 475 136 HOH HOH . I 7 HOH A 76 476 145 HOH HOH . I 7 HOH A 77 477 19 HOH HOH . I 7 HOH A 78 478 46 HOH HOH . I 7 HOH A 79 479 215 HOH HOH . I 7 HOH A 80 480 96 HOH HOH . I 7 HOH A 81 481 103 HOH HOH . I 7 HOH A 82 482 172 HOH HOH . I 7 HOH A 83 483 113 HOH HOH . I 7 HOH A 84 484 42 HOH HOH . I 7 HOH A 85 485 3 HOH HOH . I 7 HOH A 86 486 219 HOH HOH . I 7 HOH A 87 487 1 HOH HOH . I 7 HOH A 88 488 180 HOH HOH . I 7 HOH A 89 489 92 HOH HOH . I 7 HOH A 90 490 115 HOH HOH . I 7 HOH A 91 491 30 HOH HOH . I 7 HOH A 92 492 2 HOH HOH . I 7 HOH A 93 493 130 HOH HOH . I 7 HOH A 94 494 138 HOH HOH . I 7 HOH A 95 495 65 HOH HOH . I 7 HOH A 96 496 108 HOH HOH . I 7 HOH A 97 497 141 HOH HOH . I 7 HOH A 98 498 66 HOH HOH . I 7 HOH A 99 499 112 HOH HOH . I 7 HOH A 100 500 51 HOH HOH . I 7 HOH A 101 501 171 HOH HOH . I 7 HOH A 102 502 156 HOH HOH . I 7 HOH A 103 503 34 HOH HOH . I 7 HOH A 104 504 73 HOH HOH . I 7 HOH A 105 505 97 HOH HOH . I 7 HOH A 106 506 77 HOH HOH . I 7 HOH A 107 507 32 HOH HOH . I 7 HOH A 108 508 169 HOH HOH . I 7 HOH A 109 509 28 HOH HOH . I 7 HOH A 110 510 226 HOH HOH . I 7 HOH A 111 511 23 HOH HOH . I 7 HOH A 112 512 137 HOH HOH . I 7 HOH A 113 513 114 HOH HOH . I 7 HOH A 114 514 24 HOH HOH . I 7 HOH A 115 515 44 HOH HOH . I 7 HOH A 116 516 151 HOH HOH . I 7 HOH A 117 517 75 HOH HOH . I 7 HOH A 118 518 22 HOH HOH . I 7 HOH A 119 519 157 HOH HOH . I 7 HOH A 120 520 135 HOH HOH . I 7 HOH A 121 521 121 HOH HOH . I 7 HOH A 122 522 90 HOH HOH . I 7 HOH A 123 523 41 HOH HOH . I 7 HOH A 124 524 15 HOH HOH . I 7 HOH A 125 525 57 HOH HOH . I 7 HOH A 126 526 140 HOH HOH . I 7 HOH A 127 527 176 HOH HOH . I 7 HOH A 128 528 52 HOH HOH . I 7 HOH A 129 529 35 HOH HOH . I 7 HOH A 130 530 70 HOH HOH . I 7 HOH A 131 531 150 HOH HOH . I 7 HOH A 132 532 165 HOH HOH . I 7 HOH A 133 533 13 HOH HOH . I 7 HOH A 134 534 182 HOH HOH . I 7 HOH A 135 535 126 HOH HOH . I 7 HOH A 136 536 38 HOH HOH . I 7 HOH A 137 537 50 HOH HOH . I 7 HOH A 138 538 53 HOH HOH . I 7 HOH A 139 539 188 HOH HOH . I 7 HOH A 140 540 88 HOH HOH . I 7 HOH A 141 541 122 HOH HOH . I 7 HOH A 142 542 212 HOH HOH . I 7 HOH A 143 543 164 HOH HOH . I 7 HOH A 144 544 64 HOH HOH . I 7 HOH A 145 545 69 HOH HOH . I 7 HOH A 146 546 78 HOH HOH . I 7 HOH A 147 547 45 HOH HOH . I 7 HOH A 148 548 10 HOH HOH . I 7 HOH A 149 549 17 HOH HOH . I 7 HOH A 150 550 187 HOH HOH . I 7 HOH A 151 551 40 HOH HOH . I 7 HOH A 152 552 181 HOH HOH . I 7 HOH A 153 553 63 HOH HOH . I 7 HOH A 154 554 39 HOH HOH . I 7 HOH A 155 555 198 HOH HOH . I 7 HOH A 156 556 109 HOH HOH . I 7 HOH A 157 557 8 HOH HOH . I 7 HOH A 158 558 217 HOH HOH . I 7 HOH A 159 559 86 HOH HOH . I 7 HOH A 160 560 218 HOH HOH . I 7 HOH A 161 561 29 HOH HOH . I 7 HOH A 162 562 18 HOH HOH . I 7 HOH A 163 563 6 HOH HOH . I 7 HOH A 164 564 74 HOH HOH . I 7 HOH A 165 565 89 HOH HOH . I 7 HOH A 166 566 79 HOH HOH . I 7 HOH A 167 567 227 HOH HOH . I 7 HOH A 168 568 21 HOH HOH . I 7 HOH A 169 569 84 HOH HOH . I 7 HOH A 170 570 133 HOH HOH . I 7 HOH A 171 571 184 HOH HOH . I 7 HOH A 172 572 139 HOH HOH . I 7 HOH A 173 573 62 HOH HOH . I 7 HOH A 174 574 147 HOH HOH . I 7 HOH A 175 575 158 HOH HOH . I 7 HOH A 176 576 117 HOH HOH . I 7 HOH A 177 577 161 HOH HOH . I 7 HOH A 178 578 146 HOH HOH . I 7 HOH A 179 579 99 HOH HOH . I 7 HOH A 180 580 174 HOH HOH . I 7 HOH A 181 581 162 HOH HOH . I 7 HOH A 182 582 210 HOH HOH . I 7 HOH A 183 583 208 HOH HOH . I 7 HOH A 184 584 72 HOH HOH . I 7 HOH A 185 585 101 HOH HOH . I 7 HOH A 186 586 123 HOH HOH . I 7 HOH A 187 587 159 HOH HOH . I 7 HOH A 188 588 223 HOH HOH . I 7 HOH A 189 589 192 HOH HOH . I 7 HOH A 190 590 200 HOH HOH . I 7 HOH A 191 591 107 HOH HOH . I 7 HOH A 192 592 191 HOH HOH . I 7 HOH A 193 593 154 HOH HOH . I 7 HOH A 194 594 203 HOH HOH . I 7 HOH A 195 595 197 HOH HOH . I 7 HOH A 196 596 222 HOH HOH . I 7 HOH A 197 597 83 HOH HOH . I 7 HOH A 198 598 85 HOH HOH . I 7 HOH A 199 599 232 HOH HOH . I 7 HOH A 200 600 134 HOH HOH . I 7 HOH A 201 601 195 HOH HOH . I 7 HOH A 202 602 58 HOH HOH . I 7 HOH A 203 603 175 HOH HOH . I 7 HOH A 204 604 125 HOH HOH . I 7 HOH A 205 605 144 HOH HOH . I 7 HOH A 206 606 228 HOH HOH . I 7 HOH A 207 607 225 HOH HOH . I 7 HOH A 208 608 201 HOH HOH . I 7 HOH A 209 609 71 HOH HOH . I 7 HOH A 210 610 193 HOH HOH . I 7 HOH A 211 611 194 HOH HOH . I 7 HOH A 212 612 160 HOH HOH . I 7 HOH A 213 613 124 HOH HOH . I 7 HOH A 214 614 224 HOH HOH . I 7 HOH A 215 615 143 HOH HOH . I 7 HOH A 216 616 142 HOH HOH . I 7 HOH A 217 617 213 HOH HOH . I 7 HOH A 218 618 204 HOH HOH . I 7 HOH A 219 619 49 HOH HOH . I 7 HOH A 220 620 61 HOH HOH . I 7 HOH A 221 621 127 HOH HOH . I 7 HOH A 222 622 128 HOH HOH . I 7 HOH A 223 623 229 HOH HOH . I 7 HOH A 224 624 153 HOH HOH . I 7 HOH A 225 625 94 HOH HOH . I 7 HOH A 226 626 91 HOH HOH . I 7 HOH A 227 627 168 HOH HOH . I 7 HOH A 228 628 177 HOH HOH . I 7 HOH A 229 629 132 HOH HOH . I 7 HOH A 230 630 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGO . . . E 5 56.815 4.164 -0.985 1 19.47 ? C1 PGO 304 A 1 HETATM 2 C C2 PGO . . . E 5 57.785 3.135 -1.57 1 25.9 ? C2 PGO 304 A 1 HETATM 3 C C3 PGO . . . E 5 57.43 2.569 -2.949 1 25.6 ? C3 PGO 304 A 1 HETATM 4 O O1 PGO . . . E 5 55.462 3.802 -1.067 1 17.8 ? O1 PGO 304 A 1 HETATM 5 O O2 PGO . . . E 5 57.799 2.051 -0.612 1 26.94 ? O2 PGO 304 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #