data_4X6R # _model_server_result.job_id Gx3Ve_60KqJcboIuYxkO4w _model_server_result.datetime_utc '2024-11-24 21:04:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x6r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":407}' # _entry.id 4X6R # _exptl.entry_id 4X6R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4X6R _cell.length_a 125.76 _cell.length_b 125.76 _cell.length_c 140.881 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X6R _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 I N N ? 8 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N GLY 1 A GLY 1 1_555 G C1 MYR . A MYR 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale2 A C PHE 138 A PHE 138 1_555 A N SEP 139 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale3 A C SEP 139 A SEP 139 1_555 A N GLU 140 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale6 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale7 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A OD1 ASN 171 A ASN 171 1_555 I MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc2 D O2G ATP . A ATP 402 1_555 I MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc3 D O2A ATP . A ATP 402 1_555 I MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc4 D O2B ATP . A ATP 402 1_555 J MG MG . A MG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4X6R _atom_sites.fract_transf_matrix[1][1] 0.007952 _atom_sites.fract_transf_matrix[1][2] 0.004591 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007098 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 401 403 SO4 SO4 . D 4 ATP A 1 402 400 ATP ATP . E 5 TAM A 1 403 406 TAM TAM . F 6 GOL A 1 404 410 GOL GOL . G 7 MYR A 1 405 401 MYR MYR . H 3 SO4 A 1 406 1 SO4 SO4 . I 8 MG A 1 407 2 MG MG . J 8 MG A 1 408 3 MG MG . K 3 SO4 B 1 401 400 SO4 SO4 . L 3 SO4 B 1 402 403 SO4 SO4 . M 3 SO4 B 1 403 401 SO4 SO4 . N 3 SO4 B 1 404 405 SO4 SO4 . O 6 GOL B 1 405 408 GOL GOL . P 9 HOH A 1 501 54 HOH HOH . P 9 HOH A 2 502 127 HOH HOH . P 9 HOH A 3 503 118 HOH HOH . P 9 HOH A 4 504 29 HOH HOH . P 9 HOH A 5 505 246 HOH HOH . P 9 HOH A 6 506 55 HOH HOH . P 9 HOH A 7 507 62 HOH HOH . P 9 HOH A 8 508 56 HOH HOH . P 9 HOH A 9 509 64 HOH HOH . P 9 HOH A 10 510 59 HOH HOH . P 9 HOH A 11 511 123 HOH HOH . P 9 HOH A 12 512 502 HOH HOH . P 9 HOH A 13 513 61 HOH HOH . P 9 HOH A 14 514 516 HOH HOH . P 9 HOH A 15 515 63 HOH HOH . P 9 HOH A 16 516 1 HOH HOH . P 9 HOH A 17 517 2 HOH HOH . P 9 HOH A 18 518 3 HOH HOH . P 9 HOH A 19 519 4 HOH HOH . P 9 HOH A 20 520 5 HOH HOH . P 9 HOH A 21 521 6 HOH HOH . P 9 HOH A 22 522 7 HOH HOH . P 9 HOH A 23 523 8 HOH HOH . P 9 HOH A 24 524 9 HOH HOH . P 9 HOH A 25 525 10 HOH HOH . P 9 HOH A 26 526 11 HOH HOH . P 9 HOH A 27 527 13 HOH HOH . P 9 HOH A 28 528 18 HOH HOH . P 9 HOH A 29 529 19 HOH HOH . P 9 HOH A 30 530 20 HOH HOH . P 9 HOH A 31 531 22 HOH HOH . P 9 HOH A 32 532 23 HOH HOH . P 9 HOH A 33 533 26 HOH HOH . P 9 HOH A 34 534 27 HOH HOH . P 9 HOH A 35 535 30 HOH HOH . P 9 HOH A 36 536 31 HOH HOH . P 9 HOH A 37 537 32 HOH HOH . P 9 HOH A 38 538 33 HOH HOH . P 9 HOH A 39 539 34 HOH HOH . P 9 HOH A 40 540 35 HOH HOH . P 9 HOH A 41 541 36 HOH HOH . P 9 HOH A 42 542 37 HOH HOH . P 9 HOH A 43 543 38 HOH HOH . P 9 HOH A 44 544 39 HOH HOH . P 9 HOH A 45 545 40 HOH HOH . P 9 HOH A 46 546 41 HOH HOH . P 9 HOH A 47 547 43 HOH HOH . P 9 HOH A 48 548 44 HOH HOH . P 9 HOH A 49 549 45 HOH HOH . P 9 HOH A 50 550 46 HOH HOH . P 9 HOH A 51 551 47 HOH HOH . P 9 HOH A 52 552 48 HOH HOH . P 9 HOH A 53 553 53 HOH HOH . P 9 HOH A 54 554 58 HOH HOH . P 9 HOH A 55 555 60 HOH HOH . P 9 HOH A 56 556 67 HOH HOH . P 9 HOH A 57 557 68 HOH HOH . P 9 HOH A 58 558 69 HOH HOH . P 9 HOH A 59 559 70 HOH HOH . P 9 HOH A 60 560 72 HOH HOH . P 9 HOH A 61 561 107 HOH HOH . P 9 HOH A 62 562 108 HOH HOH . P 9 HOH A 63 563 109 HOH HOH . P 9 HOH A 64 564 110 HOH HOH . P 9 HOH A 65 565 111 HOH HOH . P 9 HOH A 66 566 113 HOH HOH . P 9 HOH A 67 567 114 HOH HOH . P 9 HOH A 68 568 115 HOH HOH . P 9 HOH A 69 569 116 HOH HOH . P 9 HOH A 70 570 119 HOH HOH . P 9 HOH A 71 571 120 HOH HOH . P 9 HOH A 72 572 124 HOH HOH . P 9 HOH A 73 573 125 HOH HOH . P 9 HOH A 74 574 126 HOH HOH . P 9 HOH A 75 575 128 HOH HOH . P 9 HOH A 76 576 129 HOH HOH . P 9 HOH A 77 577 131 HOH HOH . P 9 HOH A 78 578 132 HOH HOH . P 9 HOH A 79 579 136 HOH HOH . P 9 HOH A 80 580 186 HOH HOH . P 9 HOH A 81 581 187 HOH HOH . P 9 HOH A 82 582 189 HOH HOH . P 9 HOH A 83 583 190 HOH HOH . P 9 HOH A 84 584 194 HOH HOH . P 9 HOH A 85 585 195 HOH HOH . P 9 HOH A 86 586 201 HOH HOH . P 9 HOH A 87 587 203 HOH HOH . P 9 HOH A 88 588 209 HOH HOH . P 9 HOH A 89 589 212 HOH HOH . P 9 HOH A 90 590 214 HOH HOH . P 9 HOH A 91 591 220 HOH HOH . P 9 HOH A 92 592 221 HOH HOH . P 9 HOH A 93 593 222 HOH HOH . P 9 HOH A 94 594 223 HOH HOH . P 9 HOH A 95 595 226 HOH HOH . P 9 HOH A 96 596 229 HOH HOH . P 9 HOH A 97 597 238 HOH HOH . P 9 HOH A 98 598 239 HOH HOH . P 9 HOH A 99 599 240 HOH HOH . P 9 HOH A 100 600 247 HOH HOH . P 9 HOH A 101 601 248 HOH HOH . P 9 HOH A 102 602 249 HOH HOH . P 9 HOH A 103 603 250 HOH HOH . P 9 HOH A 104 604 251 HOH HOH . P 9 HOH A 105 605 252 HOH HOH . P 9 HOH A 106 606 253 HOH HOH . P 9 HOH A 107 607 255 HOH HOH . P 9 HOH A 108 608 294 HOH HOH . P 9 HOH A 109 609 295 HOH HOH . P 9 HOH A 110 610 303 HOH HOH . P 9 HOH A 111 611 304 HOH HOH . P 9 HOH A 112 612 311 HOH HOH . P 9 HOH A 113 613 315 HOH HOH . P 9 HOH A 114 614 318 HOH HOH . P 9 HOH A 115 615 329 HOH HOH . P 9 HOH A 116 616 336 HOH HOH . P 9 HOH A 117 617 350 HOH HOH . P 9 HOH A 118 618 420 HOH HOH . P 9 HOH A 119 619 432 HOH HOH . P 9 HOH A 120 620 436 HOH HOH . P 9 HOH A 121 621 440 HOH HOH . P 9 HOH A 122 622 446 HOH HOH . P 9 HOH A 123 623 449 HOH HOH . P 9 HOH A 124 624 468 HOH HOH . P 9 HOH A 125 625 480 HOH HOH . P 9 HOH A 126 626 483 HOH HOH . P 9 HOH A 127 627 484 HOH HOH . P 9 HOH A 128 628 485 HOH HOH . P 9 HOH A 129 629 487 HOH HOH . P 9 HOH A 130 630 488 HOH HOH . P 9 HOH A 131 631 490 HOH HOH . P 9 HOH A 132 632 491 HOH HOH . P 9 HOH A 133 633 492 HOH HOH . P 9 HOH A 134 634 501 HOH HOH . P 9 HOH A 135 635 503 HOH HOH . P 9 HOH A 136 636 504 HOH HOH . P 9 HOH A 137 637 505 HOH HOH . P 9 HOH A 138 638 506 HOH HOH . P 9 HOH A 139 639 515 HOH HOH . P 9 HOH A 140 640 517 HOH HOH . P 9 HOH A 141 641 518 HOH HOH . P 9 HOH A 142 642 519 HOH HOH . P 9 HOH A 143 643 522 HOH HOH . P 9 HOH A 144 644 523 HOH HOH . Q 9 HOH B 1 501 512 HOH HOH . Q 9 HOH B 2 502 154 HOH HOH . Q 9 HOH B 3 503 92 HOH HOH . Q 9 HOH B 4 504 153 HOH HOH . Q 9 HOH B 5 505 28 HOH HOH . Q 9 HOH B 6 506 94 HOH HOH . Q 9 HOH B 7 507 162 HOH HOH . Q 9 HOH B 8 508 77 HOH HOH . Q 9 HOH B 9 509 439 HOH HOH . Q 9 HOH B 10 510 180 HOH HOH . Q 9 HOH B 11 511 266 HOH HOH . Q 9 HOH B 12 512 137 HOH HOH . Q 9 HOH B 13 513 157 HOH HOH . Q 9 HOH B 14 514 514 HOH HOH . Q 9 HOH B 15 515 493 HOH HOH . Q 9 HOH B 16 516 286 HOH HOH . Q 9 HOH B 17 517 76 HOH HOH . Q 9 HOH B 18 518 158 HOH HOH . Q 9 HOH B 19 519 289 HOH HOH . Q 9 HOH B 20 520 268 HOH HOH . Q 9 HOH B 21 521 328 HOH HOH . Q 9 HOH B 22 522 471 HOH HOH . Q 9 HOH B 23 523 293 HOH HOH . Q 9 HOH B 24 524 524 HOH HOH . Q 9 HOH B 25 525 314 HOH HOH . Q 9 HOH B 26 526 411 HOH HOH . Q 9 HOH B 27 527 513 HOH HOH . Q 9 HOH B 28 528 525 HOH HOH . Q 9 HOH B 29 529 14 HOH HOH . Q 9 HOH B 30 530 21 HOH HOH . Q 9 HOH B 31 531 49 HOH HOH . Q 9 HOH B 32 532 50 HOH HOH . Q 9 HOH B 33 533 51 HOH HOH . Q 9 HOH B 34 534 52 HOH HOH . Q 9 HOH B 35 535 57 HOH HOH . Q 9 HOH B 36 536 65 HOH HOH . Q 9 HOH B 37 537 66 HOH HOH . Q 9 HOH B 38 538 74 HOH HOH . Q 9 HOH B 39 539 75 HOH HOH . Q 9 HOH B 40 540 78 HOH HOH . Q 9 HOH B 41 541 81 HOH HOH . Q 9 HOH B 42 542 83 HOH HOH . Q 9 HOH B 43 543 85 HOH HOH . Q 9 HOH B 44 544 89 HOH HOH . Q 9 HOH B 45 545 90 HOH HOH . Q 9 HOH B 46 546 91 HOH HOH . Q 9 HOH B 47 547 93 HOH HOH . Q 9 HOH B 48 548 95 HOH HOH . Q 9 HOH B 49 549 97 HOH HOH . Q 9 HOH B 50 550 98 HOH HOH . Q 9 HOH B 51 551 99 HOH HOH . Q 9 HOH B 52 552 100 HOH HOH . Q 9 HOH B 53 553 101 HOH HOH . Q 9 HOH B 54 554 103 HOH HOH . Q 9 HOH B 55 555 104 HOH HOH . Q 9 HOH B 56 556 134 HOH HOH . Q 9 HOH B 57 557 138 HOH HOH . Q 9 HOH B 58 558 140 HOH HOH . Q 9 HOH B 59 559 142 HOH HOH . Q 9 HOH B 60 560 145 HOH HOH . Q 9 HOH B 61 561 146 HOH HOH . Q 9 HOH B 62 562 148 HOH HOH . Q 9 HOH B 63 563 149 HOH HOH . Q 9 HOH B 64 564 150 HOH HOH . Q 9 HOH B 65 565 151 HOH HOH . Q 9 HOH B 66 566 152 HOH HOH . Q 9 HOH B 67 567 156 HOH HOH . Q 9 HOH B 68 568 160 HOH HOH . Q 9 HOH B 69 569 161 HOH HOH . Q 9 HOH B 70 570 163 HOH HOH . Q 9 HOH B 71 571 164 HOH HOH . Q 9 HOH B 72 572 165 HOH HOH . Q 9 HOH B 73 573 166 HOH HOH . Q 9 HOH B 74 574 167 HOH HOH . Q 9 HOH B 75 575 168 HOH HOH . Q 9 HOH B 76 576 171 HOH HOH . Q 9 HOH B 77 577 173 HOH HOH . Q 9 HOH B 78 578 174 HOH HOH . Q 9 HOH B 79 579 175 HOH HOH . Q 9 HOH B 80 580 176 HOH HOH . Q 9 HOH B 81 581 177 HOH HOH . Q 9 HOH B 82 582 179 HOH HOH . Q 9 HOH B 83 583 181 HOH HOH . Q 9 HOH B 84 584 182 HOH HOH . Q 9 HOH B 85 585 183 HOH HOH . Q 9 HOH B 86 586 185 HOH HOH . Q 9 HOH B 87 587 210 HOH HOH . Q 9 HOH B 88 588 231 HOH HOH . Q 9 HOH B 89 589 232 HOH HOH . Q 9 HOH B 90 590 236 HOH HOH . Q 9 HOH B 91 591 259 HOH HOH . Q 9 HOH B 92 592 261 HOH HOH . Q 9 HOH B 93 593 264 HOH HOH . Q 9 HOH B 94 594 265 HOH HOH . Q 9 HOH B 95 595 269 HOH HOH . Q 9 HOH B 96 596 274 HOH HOH . Q 9 HOH B 97 597 275 HOH HOH . Q 9 HOH B 98 598 277 HOH HOH . Q 9 HOH B 99 599 283 HOH HOH . Q 9 HOH B 100 600 284 HOH HOH . Q 9 HOH B 101 601 291 HOH HOH . Q 9 HOH B 102 602 360 HOH HOH . Q 9 HOH B 103 603 362 HOH HOH . Q 9 HOH B 104 604 399 HOH HOH . Q 9 HOH B 105 605 407 HOH HOH . Q 9 HOH B 106 606 408 HOH HOH . Q 9 HOH B 107 607 409 HOH HOH . Q 9 HOH B 108 608 444 HOH HOH . Q 9 HOH B 109 609 464 HOH HOH . Q 9 HOH B 110 610 465 HOH HOH . Q 9 HOH B 111 611 472 HOH HOH . Q 9 HOH B 112 612 496 HOH HOH . Q 9 HOH B 113 613 497 HOH HOH . Q 9 HOH B 114 614 499 HOH HOH . Q 9 HOH B 115 615 500 HOH HOH . Q 9 HOH B 116 616 507 HOH HOH . Q 9 HOH B 117 617 508 HOH HOH . Q 9 HOH B 118 618 509 HOH HOH . Q 9 HOH B 119 619 510 HOH HOH . Q 9 HOH B 120 620 511 HOH HOH . Q 9 HOH B 121 621 520 HOH HOH . Q 9 HOH B 122 622 526 HOH HOH . Q 9 HOH B 123 623 527 HOH HOH . Q 9 HOH B 124 624 528 HOH HOH . Q 9 HOH B 125 625 529 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 8 _atom_site.Cartn_x -48.909 _atom_site.Cartn_y 35.878 _atom_site.Cartn_z 2.331 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 68.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 407 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 797 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #