data_4X6Y # _model_server_result.job_id I-TYsqmtXcPOsze2sF9zXg _model_server_result.datetime_utc '2024-10-18 14:25:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x6y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4X6Y # _exptl.entry_id 4X6Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 336.427 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-phenoxy-N-[(1S,2R)-2-phenylcyclopropyl]piperidine-1-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.22 _cell.angle_gamma 90 _cell.entry_id 4X6Y _cell.length_a 129.228 _cell.length_b 80.722 _cell.length_c 87.326 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X6Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H24 N2 O2' _chem_comp.formula_weight 336.427 _chem_comp.id S94 _chem_comp.mon_nstd_flag . _chem_comp.name 4-phenoxy-N-[(1S,2R)-2-phenylcyclopropyl]piperidine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C14 S94 doub 277 n y C17 C18 S94 sing 278 n y C14 C10 S94 sing 279 n y C18 C16 S94 doub 280 n y C10 C2 S94 sing 281 n n C10 C15 S94 doub 282 n y C16 C15 S94 sing 283 n y C2 C3 S94 sing 284 n n C2 C1 S94 sing 285 n n C3 C1 S94 sing 286 n n C1 N5 S94 sing 287 n n N5 C6 S94 sing 288 n n O11 C6 S94 doub 289 n n C6 N8 S94 sing 290 n n N8 C13 S94 sing 291 n n N8 C9 S94 sing 292 n n C13 C12 S94 sing 293 n n C12 C7 S94 sing 294 n n C9 C4 S94 sing 295 n n C4 C7 S94 sing 296 n n C7 O19 S94 sing 297 n n O19 C20 S94 sing 298 n n C20 C21 S94 doub 299 n y C20 C25 S94 sing 300 n y C21 C22 S94 sing 301 n y C25 C24 S94 doub 302 n y C22 C23 S94 doub 303 n y C24 C23 S94 sing 304 n y C18 H1 S94 sing 305 n n C23 H2 S94 sing 306 n n C16 H3 S94 sing 307 n n C17 H4 S94 sing 308 n n C22 H5 S94 sing 309 n n C24 H6 S94 sing 310 n n C15 H7 S94 sing 311 n n C14 H8 S94 sing 312 n n C21 H9 S94 sing 313 n n C25 H10 S94 sing 314 n n C4 H11 S94 sing 315 n n C4 H12 S94 sing 316 n n C12 H13 S94 sing 317 n n C12 H14 S94 sing 318 n n C3 H15 S94 sing 319 n n C3 H16 S94 sing 320 n n C9 H17 S94 sing 321 n n C9 H18 S94 sing 322 n n C13 H19 S94 sing 323 n n C13 H20 S94 sing 324 n n C2 H21 S94 sing 325 n n C1 H22 S94 sing 326 n n C7 H23 S94 sing 327 n n N5 H24 S94 sing 328 n n # _atom_sites.entry_id 4X6Y _atom_sites.fract_transf_matrix[1][1] 0.007738 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005668 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012388 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014194 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 S94 A 1 601 601 S94 S94 . D 2 S94 B 1 601 602 S94 S94 . E 3 HOH A 1 701 748 HOH HOH . E 3 HOH A 2 702 786 HOH HOH . E 3 HOH A 3 703 701 HOH HOH . E 3 HOH A 4 704 702 HOH HOH . E 3 HOH A 5 705 703 HOH HOH . E 3 HOH A 6 706 704 HOH HOH . E 3 HOH A 7 707 705 HOH HOH . E 3 HOH A 8 708 707 HOH HOH . E 3 HOH A 9 709 708 HOH HOH . E 3 HOH A 10 710 713 HOH HOH . E 3 HOH A 11 711 716 HOH HOH . E 3 HOH A 12 712 717 HOH HOH . E 3 HOH A 13 713 718 HOH HOH . E 3 HOH A 14 714 722 HOH HOH . E 3 HOH A 15 715 726 HOH HOH . E 3 HOH A 16 716 727 HOH HOH . E 3 HOH A 17 717 728 HOH HOH . E 3 HOH A 18 718 729 HOH HOH . E 3 HOH A 19 719 732 HOH HOH . E 3 HOH A 20 720 733 HOH HOH . E 3 HOH A 21 721 734 HOH HOH . E 3 HOH A 22 722 736 HOH HOH . E 3 HOH A 23 723 740 HOH HOH . E 3 HOH A 24 724 745 HOH HOH . E 3 HOH A 25 725 746 HOH HOH . E 3 HOH A 26 726 747 HOH HOH . E 3 HOH A 27 727 749 HOH HOH . E 3 HOH A 28 728 750 HOH HOH . E 3 HOH A 29 729 751 HOH HOH . E 3 HOH A 30 730 752 HOH HOH . E 3 HOH A 31 731 753 HOH HOH . E 3 HOH A 32 732 754 HOH HOH . E 3 HOH A 33 733 757 HOH HOH . E 3 HOH A 34 734 758 HOH HOH . E 3 HOH A 35 735 759 HOH HOH . E 3 HOH A 36 736 760 HOH HOH . E 3 HOH A 37 737 763 HOH HOH . E 3 HOH A 38 738 764 HOH HOH . E 3 HOH A 39 739 765 HOH HOH . E 3 HOH A 40 740 766 HOH HOH . E 3 HOH A 41 741 767 HOH HOH . E 3 HOH A 42 742 771 HOH HOH . E 3 HOH A 43 743 773 HOH HOH . E 3 HOH A 44 744 776 HOH HOH . E 3 HOH A 45 745 781 HOH HOH . E 3 HOH A 46 746 782 HOH HOH . E 3 HOH A 47 747 783 HOH HOH . E 3 HOH A 48 748 784 HOH HOH . E 3 HOH A 49 749 788 HOH HOH . F 3 HOH B 1 701 735 HOH HOH . F 3 HOH B 2 702 770 HOH HOH . F 3 HOH B 3 703 772 HOH HOH . F 3 HOH B 4 704 774 HOH HOH . F 3 HOH B 5 705 755 HOH HOH . F 3 HOH B 6 706 706 HOH HOH . F 3 HOH B 7 707 709 HOH HOH . F 3 HOH B 8 708 710 HOH HOH . F 3 HOH B 9 709 711 HOH HOH . F 3 HOH B 10 710 712 HOH HOH . F 3 HOH B 11 711 714 HOH HOH . F 3 HOH B 12 712 715 HOH HOH . F 3 HOH B 13 713 719 HOH HOH . F 3 HOH B 14 714 720 HOH HOH . F 3 HOH B 15 715 721 HOH HOH . F 3 HOH B 16 716 723 HOH HOH . F 3 HOH B 17 717 724 HOH HOH . F 3 HOH B 18 718 725 HOH HOH . F 3 HOH B 19 719 730 HOH HOH . F 3 HOH B 20 720 731 HOH HOH . F 3 HOH B 21 721 737 HOH HOH . F 3 HOH B 22 722 738 HOH HOH . F 3 HOH B 23 723 739 HOH HOH . F 3 HOH B 24 724 741 HOH HOH . F 3 HOH B 25 725 742 HOH HOH . F 3 HOH B 26 726 743 HOH HOH . F 3 HOH B 27 727 744 HOH HOH . F 3 HOH B 28 728 756 HOH HOH . F 3 HOH B 29 729 761 HOH HOH . F 3 HOH B 30 730 762 HOH HOH . F 3 HOH B 31 731 768 HOH HOH . F 3 HOH B 32 732 769 HOH HOH . F 3 HOH B 33 733 775 HOH HOH . F 3 HOH B 34 734 777 HOH HOH . F 3 HOH B 35 735 778 HOH HOH . F 3 HOH B 36 736 779 HOH HOH . F 3 HOH B 37 737 780 HOH HOH . F 3 HOH B 38 738 785 HOH HOH . F 3 HOH B 39 739 787 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 S94 . . . C 2 -6.516 8.835 26.423 1 48.48 ? C18 S94 601 A 1 HETATM 2 C C23 S94 . . . C 2 -2.424 0.499 38.628 1 64.79 ? C23 S94 601 A 1 HETATM 3 C C16 S94 . . . C 2 -6.446 8.739 27.795 1 48.82 ? C16 S94 601 A 1 HETATM 4 C C17 S94 . . . C 2 -5.538 8.248 25.655 1 47.44 ? C17 S94 601 A 1 HETATM 5 C C22 S94 . . . C 2 -3.301 0.096 37.643 1 64.65 ? C22 S94 601 A 1 HETATM 6 C C24 S94 . . . C 2 -1.469 1.448 38.346 1 62.63 ? C24 S94 601 A 1 HETATM 7 C C15 S94 . . . C 2 -5.405 8.061 28.392 1 46.89 ? C15 S94 601 A 1 HETATM 8 C C14 S94 . . . C 2 -4.501 7.578 26.266 1 47.39 ? C14 S94 601 A 1 HETATM 9 C C21 S94 . . . C 2 -3.23 0.632 36.375 1 62.8 ? C21 S94 601 A 1 HETATM 10 C C25 S94 . . . C 2 -1.395 1.988 37.082 1 60.39 ? C25 S94 601 A 1 HETATM 11 C C10 S94 . . . C 2 -4.415 7.471 27.637 1 46.9 ? C10 S94 601 A 1 HETATM 12 C C20 S94 . . . C 2 -2.267 1.581 36.093 1 60.3 ? C20 S94 601 A 1 HETATM 13 C C6 S94 . . . C 2 -3.581 4.779 31.081 1 45.39 ? C6 S94 601 A 1 HETATM 14 C C4 S94 . . . C 2 -4.053 2.208 33.477 1 49.55 ? C4 S94 601 A 1 HETATM 15 C C12 S94 . . . C 2 -1.834 1.901 32.531 1 48.93 ? C12 S94 601 A 1 HETATM 16 C C3 S94 . . . C 2 -2.212 7.5 28.883 1 47.11 ? C3 S94 601 A 1 HETATM 17 C C9 S94 . . . C 2 -3.951 3.701 33.258 1 48.61 ? C9 S94 601 A 1 HETATM 18 C C13 S94 . . . C 2 -1.801 3.371 32.167 1 47.7 ? C13 S94 601 A 1 HETATM 19 C C2 S94 . . . C 2 -3.281 6.726 28.198 1 46.51 ? C2 S94 601 A 1 HETATM 20 C C1 S94 . . . C 2 -3.11 6.618 29.685 1 47.44 ? C1 S94 601 A 1 HETATM 21 C C7 S94 . . . C 2 -2.697 1.596 33.73 1 49.32 ? C7 S94 601 A 1 HETATM 22 N N8 S94 . . . C 2 -3.106 3.997 32.132 1 48.86 ? N8 S94 601 A 1 HETATM 23 N N5 S94 . . . C 2 -2.672 5.393 30.267 1 44.77 ? N5 S94 601 A 1 HETATM 24 O O11 S94 . . . C 2 -4.765 4.955 30.849 1 45.43 ? O11 S94 601 A 1 HETATM 25 O O19 S94 . . . C 2 -2.083 2.205 34.858 1 55.5 ? O19 S94 601 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #