data_4X88 # _model_server_result.job_id E35mKXYkKkzf8hIPHRt6IQ _model_server_result.datetime_utc '2025-08-30 22:53:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x88 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":301}' # _entry.id 4X88 # _exptl.entry_id 4X88 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X88 _cell.length_a 80.23 _cell.length_b 336.02 _cell.length_c 80.3 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X88 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,Q,R 1 1,2 C,D,K,L,M,N,O,P,S,T 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -80.23 0 40.15 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 I N N ? 2 K N N ? 2 O N N # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 38 n n C9 C1 2CV sing 39 n n C12 C15 2CV sing 40 n n C15 C18 2CV sing 41 n n C18 C21 2CV sing 42 n n C21 C24 2CV sing 43 n n C24 C27 2CV sing 44 n n C27 C30 2CV sing 45 n n C30 N33 2CV sing 46 n n C30 O34 2CV doub 47 n n N33 C35 2CV sing 48 n n N33 C36 2CV sing 49 n n C35 C60 2CV sing 50 n n C36 C37 2CV sing 51 n n C37 C40 2CV sing 52 n n C37 O47 2CV sing 53 n n C40 C41 2CV sing 54 n n C40 O49 2CV sing 55 n n C41 C42 2CV sing 56 n n C41 O51 2CV sing 57 n n C42 C43 2CV sing 58 n n C42 O53 2CV sing 59 n n C43 O44 2CV sing 60 n n C60 O63 2CV sing 61 n n C1 C0 2CV sing 62 n n C9 H91C 2CV sing 63 n n C9 H92C 2CV sing 64 n n C12 H121 2CV sing 65 n n C12 H122 2CV sing 66 n n C1 H11C 2CV sing 67 n n C1 H12C 2CV sing 68 n n C15 H151 2CV sing 69 n n C15 H152 2CV sing 70 n n C18 H181 2CV sing 71 n n C18 H182 2CV sing 72 n n C21 H211 2CV sing 73 n n C21 H212 2CV sing 74 n n C24 H241 2CV sing 75 n n C24 H242 2CV sing 76 n n C27 H271 2CV sing 77 n n C27 H272 2CV sing 78 n n C35 H351 2CV sing 79 n n C35 H352 2CV sing 80 n n C36 H361 2CV sing 81 n n C36 H362 2CV sing 82 n n C60 H601 2CV sing 83 n n C60 H602 2CV sing 84 n n C37 H37 2CV sing 85 n n C40 H40 2CV sing 86 n n O47 H47 2CV sing 87 n n C41 H41 2CV sing 88 n n O49 H49 2CV sing 89 n n C42 H42 2CV sing 90 n n O51 H51 2CV sing 91 n n C43 H431 2CV sing 92 n n C43 H432 2CV sing 93 n n O53 H53 2CV sing 94 n n O44 H44 2CV sing 95 n n O63 H63 2CV sing 96 n n C0 H01C 2CV sing 97 n n C0 H02C 2CV sing 98 n n C0 H03C 2CV sing 99 n n # _atom_sites.entry_id 4X88 _atom_sites.fract_transf_matrix[1][1] 0.012464 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 2CV A 1 301 300 2CV 2CV . F 3 1PE A 1 302 350 1PE 12P . G 4 NA A 1 303 501 NA NA . H 4 NA A 1 304 502 NA NA . I 2 2CV B 1 301 300 2CV 2CV . J 3 1PE B 1 302 350 1PE 12P . K 2 2CV C 1 301 300 2CV 2CV . L 3 1PE C 1 302 350 1PE 12P . M 4 NA C 1 303 501 NA NA . N 4 NA C 1 304 502 NA NA . O 2 2CV D 1 301 300 2CV 2CV . P 3 1PE D 1 302 350 1PE 12P . Q 5 HOH A 1 401 2 HOH HOH . R 5 HOH B 1 401 1 HOH HOH . S 5 HOH C 1 401 5 HOH HOH . S 5 HOH C 2 402 3 HOH HOH . T 5 HOH D 1 401 6 HOH HOH . T 5 HOH D 2 402 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . K 2 -23.223 -102.521 15.716 1 25.93 ? C9 2CV 301 C 1 HETATM 2 C C12 2CV . . . K 2 -21.927 -101.828 16.138 1 25.54 ? C12 2CV 301 C 1 HETATM 3 C C15 2CV . . . K 2 -22.102 -100.384 16.611 1 23.74 ? C15 2CV 301 C 1 HETATM 4 C C18 2CV . . . K 2 -20.801 -99.583 16.738 1 23.75 ? C18 2CV 301 C 1 HETATM 5 C C21 2CV . . . K 2 -20.978 -98.114 16.396 1 23.58 ? C21 2CV 301 C 1 HETATM 6 C C24 2CV . . . K 2 -19.78 -97.216 16.678 1 24.67 ? C24 2CV 301 C 1 HETATM 7 C C27 2CV . . . K 2 -20.136 -95.716 16.611 1 24.19 ? C27 2CV 301 C 1 HETATM 8 C C30 2CV . . . K 2 -19.087 -94.809 17.222 1 24.52 ? C30 2CV 301 C 1 HETATM 9 N N33 2CV . . . K 2 -19.297 -93.464 17.183 1 24.25 ? N33 2CV 301 C 1 HETATM 10 O O34 2CV . . . K 2 -18.032 -95.286 17.64 1 25.7 ? O34 2CV 301 C 1 HETATM 11 C C35 2CV . . . K 2 -20.366 -92.792 16.403 1 24.41 ? C35 2CV 301 C 1 HETATM 12 C C36 2CV . . . K 2 -18.464 -92.561 17.996 1 24.19 ? C36 2CV 301 C 1 HETATM 13 C C37 2CV . . . K 2 -16.996 -92.501 17.575 1 27.17 ? C37 2CV 301 C 1 HETATM 14 C C40 2CV . . . K 2 -16.129 -91.754 18.59 1 27.41 ? C40 2CV 301 C 1 HETATM 15 O O47 2CV . . . K 2 -16.845 -91.981 16.25 1 29.41 ? O47 2CV 301 C 1 HETATM 16 O O49 2CV . . . K 2 -16.211 -92.467 19.821 1 26.05 ? O49 2CV 301 C 1 HETATM 17 C C60 2CV . . . K 2 -21.206 -91.801 17.197 1 22.53 ? C60 2CV 301 C 1 HETATM 18 O O63 2CV . . . K 2 -21.82 -90.82 16.348 1 23.77 ? O63 2CV 301 C 1 HETATM 19 C C1 2CV . . . K 2 -23.016 -103.865 15.025 1 28.98 ? C1 2CV 301 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 722 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #