data_4X93 # _model_server_result.job_id zVAWCDLOfvTPzX3Ih7ChGA _model_server_result.datetime_utc '2024-11-13 01:12:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x93 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 4X93 # _exptl.entry_id 4X93 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X93 _cell.length_a 86.82 _cell.length_b 86.82 _cell.length_c 365.848 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X93 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,O 1 1 B,H,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 33 A CYS 32 1_555 A SG CYS 57 A CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 B SG CYS 33 B CYS 32 1_555 B SG CYS 57 B CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? covale ? covale1 A ND2 ASN 67 A ASN 66 1_555 C C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale2 A ND2 ASN 241 A ASN 240 1_555 D C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 A ND2 ASN 257 A ASN 256 1_555 E C1 NAG . A NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale4 A ND2 ASN 366 A ASN 365 1_555 F C1 NAG . A NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale5 B ND2 ASN 67 B ASN 66 1_555 H C1 NAG . B NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale6 B ND2 ASN 241 B ASN 240 1_555 I C1 NAG . B NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale7 B ND2 ASN 257 B ASN 256 1_555 J C1 NAG . B NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale8 B ND2 ASN 366 B ASN 365 1_555 K C1 NAG . B NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 4X93 _atom_sites.fract_transf_matrix[1][1] 0.011518 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011518 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002733 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 401 380 NAG NAG . D 2 NAG A 1 402 381 NAG NAG . E 2 NAG A 1 403 382 NAG NAG . F 2 NAG A 1 404 383 NAG NAG . G 3 EPE A 1 405 385 EPE EPE . H 2 NAG B 1 401 380 NAG NAG . I 2 NAG B 1 402 381 NAG NAG . J 2 NAG B 1 403 382 NAG NAG . K 2 NAG B 1 404 383 NAG NAG . L 3 EPE B 1 405 385 EPE EPE . M 4 PEG B 1 406 391 PEG PEG . N 5 PE8 B 1 407 397 PE8 PE8 . O 6 HOH A 1 501 39 HOH HOH . O 6 HOH A 2 502 38 HOH HOH . O 6 HOH A 3 503 87 HOH HOH . O 6 HOH A 4 504 64 HOH HOH . O 6 HOH A 5 505 1 HOH HOH . O 6 HOH A 6 506 2 HOH HOH . O 6 HOH A 7 507 3 HOH HOH . O 6 HOH A 8 508 4 HOH HOH . O 6 HOH A 9 509 5 HOH HOH . O 6 HOH A 10 510 6 HOH HOH . O 6 HOH A 11 511 8 HOH HOH . O 6 HOH A 12 512 9 HOH HOH . O 6 HOH A 13 513 10 HOH HOH . O 6 HOH A 14 514 11 HOH HOH . O 6 HOH A 15 515 13 HOH HOH . O 6 HOH A 16 516 14 HOH HOH . O 6 HOH A 17 517 16 HOH HOH . O 6 HOH A 18 518 17 HOH HOH . O 6 HOH A 19 519 20 HOH HOH . O 6 HOH A 20 520 23 HOH HOH . O 6 HOH A 21 521 29 HOH HOH . O 6 HOH A 22 522 32 HOH HOH . O 6 HOH A 23 523 41 HOH HOH . O 6 HOH A 24 524 42 HOH HOH . O 6 HOH A 25 525 44 HOH HOH . O 6 HOH A 26 526 46 HOH HOH . O 6 HOH A 27 527 47 HOH HOH . O 6 HOH A 28 528 49 HOH HOH . O 6 HOH A 29 529 50 HOH HOH . O 6 HOH A 30 530 53 HOH HOH . O 6 HOH A 31 531 56 HOH HOH . O 6 HOH A 32 532 59 HOH HOH . O 6 HOH A 33 533 60 HOH HOH . O 6 HOH A 34 534 61 HOH HOH . O 6 HOH A 35 535 63 HOH HOH . O 6 HOH A 36 536 70 HOH HOH . O 6 HOH A 37 537 74 HOH HOH . O 6 HOH A 38 538 75 HOH HOH . O 6 HOH A 39 539 77 HOH HOH . O 6 HOH A 40 540 78 HOH HOH . O 6 HOH A 41 541 80 HOH HOH . O 6 HOH A 42 542 83 HOH HOH . O 6 HOH A 43 543 84 HOH HOH . O 6 HOH A 44 544 86 HOH HOH . O 6 HOH A 45 545 88 HOH HOH . P 6 HOH B 1 501 91 HOH HOH . P 6 HOH B 2 502 36 HOH HOH . P 6 HOH B 3 503 73 HOH HOH . P 6 HOH B 4 504 22 HOH HOH . P 6 HOH B 5 505 65 HOH HOH . P 6 HOH B 6 506 18 HOH HOH . P 6 HOH B 7 507 89 HOH HOH . P 6 HOH B 8 508 7 HOH HOH . P 6 HOH B 9 509 12 HOH HOH . P 6 HOH B 10 510 15 HOH HOH . P 6 HOH B 11 511 19 HOH HOH . P 6 HOH B 12 512 21 HOH HOH . P 6 HOH B 13 513 24 HOH HOH . P 6 HOH B 14 514 25 HOH HOH . P 6 HOH B 15 515 26 HOH HOH . P 6 HOH B 16 516 27 HOH HOH . P 6 HOH B 17 517 28 HOH HOH . P 6 HOH B 18 518 30 HOH HOH . P 6 HOH B 19 519 31 HOH HOH . P 6 HOH B 20 520 33 HOH HOH . P 6 HOH B 21 521 34 HOH HOH . P 6 HOH B 22 522 35 HOH HOH . P 6 HOH B 23 523 37 HOH HOH . P 6 HOH B 24 524 40 HOH HOH . P 6 HOH B 25 525 43 HOH HOH . P 6 HOH B 26 526 45 HOH HOH . P 6 HOH B 27 527 48 HOH HOH . P 6 HOH B 28 528 51 HOH HOH . P 6 HOH B 29 529 52 HOH HOH . P 6 HOH B 30 530 54 HOH HOH . P 6 HOH B 31 531 55 HOH HOH . P 6 HOH B 32 532 57 HOH HOH . P 6 HOH B 33 533 58 HOH HOH . P 6 HOH B 34 534 62 HOH HOH . P 6 HOH B 35 535 66 HOH HOH . P 6 HOH B 36 536 67 HOH HOH . P 6 HOH B 37 537 68 HOH HOH . P 6 HOH B 38 538 69 HOH HOH . P 6 HOH B 39 539 71 HOH HOH . P 6 HOH B 40 540 72 HOH HOH . P 6 HOH B 41 541 76 HOH HOH . P 6 HOH B 42 542 79 HOH HOH . P 6 HOH B 43 543 81 HOH HOH . P 6 HOH B 44 544 82 HOH HOH . P 6 HOH B 45 545 85 HOH HOH . P 6 HOH B 46 546 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . G 3 23.846 109.32 61.844 1 79.15 ? N1 EPE 405 A 1 HETATM 2 C C2 EPE . . . G 3 23.489 110.743 61.94 1 84.31 ? C2 EPE 405 A 1 HETATM 3 C C3 EPE . . . G 3 23.891 111.438 60.649 1 87.98 ? C3 EPE 405 A 1 HETATM 4 N N4 EPE . . . G 3 25.347 111.327 60.476 1 89.31 ? N4 EPE 405 A 1 HETATM 5 C C5 EPE . . . G 3 25.736 109.912 60.422 1 83.78 ? C5 EPE 405 A 1 HETATM 6 C C6 EPE . . . G 3 25.305 109.223 61.713 1 80.76 ? C6 EPE 405 A 1 HETATM 7 C C7 EPE . . . G 3 25.744 112.017 59.238 1 98.1 ? C7 EPE 405 A 1 HETATM 8 C C8 EPE . . . G 3 26.256 113.409 59.596 1 103.58 ? C8 EPE 405 A 1 HETATM 9 O O8 EPE . . . G 3 27.503 113.27 60.291 1 106.45 ? O8 EPE 405 A 1 HETATM 10 C C9 EPE . . . G 3 23.382 108.591 63.033 1 73.77 ? C9 EPE 405 A 1 HETATM 11 C C10 EPE . . . G 3 21.909 108.252 62.858 1 71.23 ? C10 EPE 405 A 1 HETATM 12 S S EPE . . . G 3 21.35 107.271 64.079 1 66.31 ? S EPE 405 A 1 HETATM 13 O O1S EPE . . . G 3 21.503 105.85 63.711 1 64.16 ? O1S EPE 405 A 1 HETATM 14 O O2S EPE . . . G 3 19.921 107.575 64.28 1 67.97 ? O2S EPE 405 A 1 HETATM 15 O O3S EPE . . . G 3 22.08 107.545 65.328 1 65.62 ? O3S EPE 405 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #