data_4X94 # _model_server_result.job_id I69vWwnald6JAtjJKf50UA _model_server_result.datetime_utc '2024-11-14 04:53:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 4X94 # _exptl.entry_id 4X94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4X94 _cell.length_a 95.978 _cell.length_b 95.978 _cell.length_c 207.943 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 33 A CYS 32 1_555 A SG CYS 57 A CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? covale ? covale1 A ND2 ASN 67 A ASN 66 1_555 B C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? covale ? covale2 A ND2 ASN 241 A ASN 240 1_555 C C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 A ND2 ASN 257 A ASN 256 1_555 D C1 NAG . A NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale4 A ND2 ASN 366 A ASN 365 1_555 E C1 NAG . A NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 4X94 _atom_sites.fract_transf_matrix[1][1] 0.010419 _atom_sites.fract_transf_matrix[1][2] 0.006015 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 401 380 NAG NAG . C 2 NAG A 1 402 381 NAG NAG . D 2 NAG A 1 403 382 NAG NAG . E 2 NAG A 1 404 383 NAG NAG . F 3 EPE A 1 405 384 EPE EPE . G 4 SO4 A 1 406 401 SO4 SO4 . H 4 SO4 A 1 407 402 SO4 SO4 . I 4 SO4 A 1 408 403 SO4 SO4 . J 4 SO4 A 1 409 404 SO4 SO4 . K 4 SO4 A 1 410 405 SO4 SO4 . L 5 HOH A 1 501 14 HOH HOH . L 5 HOH A 2 502 13 HOH HOH . L 5 HOH A 3 503 16 HOH HOH . L 5 HOH A 4 504 18 HOH HOH . L 5 HOH A 5 505 19 HOH HOH . L 5 HOH A 6 506 10 HOH HOH . L 5 HOH A 7 507 22 HOH HOH . L 5 HOH A 8 508 8 HOH HOH . L 5 HOH A 9 509 34 HOH HOH . L 5 HOH A 10 510 1 HOH HOH . L 5 HOH A 11 511 2 HOH HOH . L 5 HOH A 12 512 3 HOH HOH . L 5 HOH A 13 513 4 HOH HOH . L 5 HOH A 14 514 5 HOH HOH . L 5 HOH A 15 515 6 HOH HOH . L 5 HOH A 16 516 7 HOH HOH . L 5 HOH A 17 517 9 HOH HOH . L 5 HOH A 18 518 11 HOH HOH . L 5 HOH A 19 519 12 HOH HOH . L 5 HOH A 20 520 15 HOH HOH . L 5 HOH A 21 521 17 HOH HOH . L 5 HOH A 22 522 20 HOH HOH . L 5 HOH A 23 523 21 HOH HOH . L 5 HOH A 24 524 23 HOH HOH . L 5 HOH A 25 525 24 HOH HOH . L 5 HOH A 26 526 25 HOH HOH . L 5 HOH A 27 527 26 HOH HOH . L 5 HOH A 28 528 27 HOH HOH . L 5 HOH A 29 529 28 HOH HOH . L 5 HOH A 30 530 29 HOH HOH . L 5 HOH A 31 531 30 HOH HOH . L 5 HOH A 32 532 31 HOH HOH . L 5 HOH A 33 533 32 HOH HOH . L 5 HOH A 34 534 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . F 3 38.218 -31.539 25.55 1 111.54 ? N1 EPE 405 A 1 HETATM 2 C C2 EPE . . . F 3 38.744 -31.06 24.255 1 113.39 ? C2 EPE 405 A 1 HETATM 3 C C3 EPE . . . F 3 40.035 -31.77 23.824 1 116.31 ? C3 EPE 405 A 1 HETATM 4 N N4 EPE . . . F 3 41.054 -31.673 24.887 1 121.2 ? N4 EPE 405 A 1 HETATM 5 C C5 EPE . . . F 3 40.532 -32.381 26.073 1 119.24 ? C5 EPE 405 A 1 HETATM 6 C C6 EPE . . . F 3 39.29 -31.64 26.576 1 117.16 ? C6 EPE 405 A 1 HETATM 7 C C7 EPE . . . F 3 42.383 -32.174 24.46 1 117.34 ? C7 EPE 405 A 1 HETATM 8 C C8 EPE . . . F 3 43.429 -31.059 24.57 1 113.38 ? C8 EPE 405 A 1 HETATM 9 O O8 EPE . . . F 3 44.372 -31.373 25.596 1 110.64 ? O8 EPE 405 A 1 HETATM 10 C C9 EPE . . . F 3 37.178 -30.59 25.988 1 108.08 ? C9 EPE 405 A 1 HETATM 11 C C10 EPE . . . F 3 36.324 -31.187 27.109 1 113.15 ? C10 EPE 405 A 1 HETATM 12 S S EPE . . . F 3 35.542 -30.022 28.016 1 120.3 ? S EPE 405 A 1 HETATM 13 O O1S EPE . . . F 3 34.09 -30.341 28.03 1 124.35 ? O1S EPE 405 A 1 HETATM 14 O O2S EPE . . . F 3 35.739 -28.694 27.377 1 113.51 ? O2S EPE 405 A 1 HETATM 15 O O3S EPE . . . F 3 36.033 -30.038 29.422 1 107.78 ? O3S EPE 405 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #