data_4XAB # _model_server_result.job_id FgI8woJlX6nXeTa1PRPPEA _model_server_result.datetime_utc '2025-02-28 22:51:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4XAB # _exptl.entry_id 4XAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XAB _cell.length_a 42.612 _cell.length_b 65.803 _cell.length_c 84.462 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 129 A HIS 129 1_555 B NI NI . A NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc2 A OD1 ASP 131 A ASP 131 1_555 B NI NI . A NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc3 A NE2 HIS 215 A HIS 215 1_555 B NI NI . A NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc4 B NI NI . A NI 301 1_555 C N3 IMD . A IMD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc5 B NI NI . A NI 301 1_555 D N1 IMD . A IMD 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc6 B NI NI . A NI 301 1_555 E O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 4XAB _atom_sites.fract_transf_matrix[1][1] 0.023468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01184 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 301 253 NI NI . C 3 IMD A 1 302 254 IMD IMD . D 3 IMD A 1 303 255 IMD IMD . E 4 HOH A 1 401 275 HOH HOH . E 4 HOH A 2 402 2 HOH HOH . E 4 HOH A 3 403 313 HOH HOH . E 4 HOH A 4 404 318 HOH HOH . E 4 HOH A 5 405 291 HOH HOH . E 4 HOH A 6 406 269 HOH HOH . E 4 HOH A 7 407 366 HOH HOH . E 4 HOH A 8 408 387 HOH HOH . E 4 HOH A 9 409 331 HOH HOH . E 4 HOH A 10 410 316 HOH HOH . E 4 HOH A 11 411 367 HOH HOH . E 4 HOH A 12 412 341 HOH HOH . E 4 HOH A 13 413 300 HOH HOH . E 4 HOH A 14 414 348 HOH HOH . E 4 HOH A 15 415 376 HOH HOH . E 4 HOH A 16 416 306 HOH HOH . E 4 HOH A 17 417 302 HOH HOH . E 4 HOH A 18 418 298 HOH HOH . E 4 HOH A 19 419 283 HOH HOH . E 4 HOH A 20 420 289 HOH HOH . E 4 HOH A 21 421 349 HOH HOH . E 4 HOH A 22 422 323 HOH HOH . E 4 HOH A 23 423 292 HOH HOH . E 4 HOH A 24 424 307 HOH HOH . E 4 HOH A 25 425 303 HOH HOH . E 4 HOH A 26 426 270 HOH HOH . E 4 HOH A 27 427 295 HOH HOH . E 4 HOH A 28 428 356 HOH HOH . E 4 HOH A 29 429 276 HOH HOH . E 4 HOH A 30 430 353 HOH HOH . E 4 HOH A 31 431 340 HOH HOH . E 4 HOH A 32 432 343 HOH HOH . E 4 HOH A 33 433 420 HOH HOH . E 4 HOH A 34 434 314 HOH HOH . E 4 HOH A 35 435 424 HOH HOH . E 4 HOH A 36 436 315 HOH HOH . E 4 HOH A 37 437 378 HOH HOH . E 4 HOH A 38 438 267 HOH HOH . E 4 HOH A 39 439 294 HOH HOH . E 4 HOH A 40 440 345 HOH HOH . E 4 HOH A 41 441 342 HOH HOH . E 4 HOH A 42 442 381 HOH HOH . E 4 HOH A 43 443 257 HOH HOH . E 4 HOH A 44 444 383 HOH HOH . E 4 HOH A 45 445 1 HOH HOH . E 4 HOH A 46 446 393 HOH HOH . E 4 HOH A 47 447 273 HOH HOH . E 4 HOH A 48 448 264 HOH HOH . E 4 HOH A 49 449 304 HOH HOH . E 4 HOH A 50 450 296 HOH HOH . E 4 HOH A 51 451 405 HOH HOH . E 4 HOH A 52 452 415 HOH HOH . E 4 HOH A 53 453 305 HOH HOH . E 4 HOH A 54 454 369 HOH HOH . E 4 HOH A 55 455 379 HOH HOH . E 4 HOH A 56 456 410 HOH HOH . E 4 HOH A 57 457 407 HOH HOH . E 4 HOH A 58 458 330 HOH HOH . E 4 HOH A 59 459 358 HOH HOH . E 4 HOH A 60 460 421 HOH HOH . E 4 HOH A 61 461 406 HOH HOH . E 4 HOH A 62 462 329 HOH HOH . E 4 HOH A 63 463 370 HOH HOH . E 4 HOH A 64 464 299 HOH HOH . E 4 HOH A 65 465 408 HOH HOH . E 4 HOH A 66 466 335 HOH HOH . E 4 HOH A 67 467 272 HOH HOH . E 4 HOH A 68 468 417 HOH HOH . E 4 HOH A 69 469 280 HOH HOH . E 4 HOH A 70 470 301 HOH HOH . E 4 HOH A 71 471 344 HOH HOH . E 4 HOH A 72 472 371 HOH HOH . E 4 HOH A 73 473 412 HOH HOH . E 4 HOH A 74 474 411 HOH HOH . E 4 HOH A 75 475 375 HOH HOH . E 4 HOH A 76 476 396 HOH HOH . E 4 HOH A 77 477 308 HOH HOH . E 4 HOH A 78 478 258 HOH HOH . E 4 HOH A 79 479 259 HOH HOH . E 4 HOH A 80 480 260 HOH HOH . E 4 HOH A 81 481 261 HOH HOH . E 4 HOH A 82 482 262 HOH HOH . E 4 HOH A 83 483 263 HOH HOH . E 4 HOH A 84 484 265 HOH HOH . E 4 HOH A 85 485 266 HOH HOH . E 4 HOH A 86 486 268 HOH HOH . E 4 HOH A 87 487 271 HOH HOH . E 4 HOH A 88 488 274 HOH HOH . E 4 HOH A 89 489 277 HOH HOH . E 4 HOH A 90 490 278 HOH HOH . E 4 HOH A 91 491 279 HOH HOH . E 4 HOH A 92 492 281 HOH HOH . E 4 HOH A 93 493 282 HOH HOH . E 4 HOH A 94 494 284 HOH HOH . E 4 HOH A 95 495 285 HOH HOH . E 4 HOH A 96 496 286 HOH HOH . E 4 HOH A 97 497 287 HOH HOH . E 4 HOH A 98 498 288 HOH HOH . E 4 HOH A 99 499 290 HOH HOH . E 4 HOH A 100 500 293 HOH HOH . E 4 HOH A 101 501 297 HOH HOH . E 4 HOH A 102 502 309 HOH HOH . E 4 HOH A 103 503 310 HOH HOH . E 4 HOH A 104 504 311 HOH HOH . E 4 HOH A 105 505 312 HOH HOH . E 4 HOH A 106 506 317 HOH HOH . E 4 HOH A 107 507 319 HOH HOH . E 4 HOH A 108 508 320 HOH HOH . E 4 HOH A 109 509 321 HOH HOH . E 4 HOH A 110 510 322 HOH HOH . E 4 HOH A 111 511 324 HOH HOH . E 4 HOH A 112 512 325 HOH HOH . E 4 HOH A 113 513 326 HOH HOH . E 4 HOH A 114 514 327 HOH HOH . E 4 HOH A 115 515 328 HOH HOH . E 4 HOH A 116 516 332 HOH HOH . E 4 HOH A 117 517 333 HOH HOH . E 4 HOH A 118 518 334 HOH HOH . E 4 HOH A 119 519 336 HOH HOH . E 4 HOH A 120 520 337 HOH HOH . E 4 HOH A 121 521 338 HOH HOH . E 4 HOH A 122 522 339 HOH HOH . E 4 HOH A 123 523 346 HOH HOH . E 4 HOH A 124 524 347 HOH HOH . E 4 HOH A 125 525 350 HOH HOH . E 4 HOH A 126 526 351 HOH HOH . E 4 HOH A 127 527 352 HOH HOH . E 4 HOH A 128 528 354 HOH HOH . E 4 HOH A 129 529 355 HOH HOH . E 4 HOH A 130 530 357 HOH HOH . E 4 HOH A 131 531 359 HOH HOH . E 4 HOH A 132 532 360 HOH HOH . E 4 HOH A 133 533 361 HOH HOH . E 4 HOH A 134 534 362 HOH HOH . E 4 HOH A 135 535 363 HOH HOH . E 4 HOH A 136 536 364 HOH HOH . E 4 HOH A 137 537 365 HOH HOH . E 4 HOH A 138 538 368 HOH HOH . E 4 HOH A 139 539 372 HOH HOH . E 4 HOH A 140 540 373 HOH HOH . E 4 HOH A 141 541 374 HOH HOH . E 4 HOH A 142 542 377 HOH HOH . E 4 HOH A 143 543 380 HOH HOH . E 4 HOH A 144 544 382 HOH HOH . E 4 HOH A 145 545 384 HOH HOH . E 4 HOH A 146 546 385 HOH HOH . E 4 HOH A 147 547 386 HOH HOH . E 4 HOH A 148 548 388 HOH HOH . E 4 HOH A 149 549 389 HOH HOH . E 4 HOH A 150 550 390 HOH HOH . E 4 HOH A 151 551 391 HOH HOH . E 4 HOH A 152 552 392 HOH HOH . E 4 HOH A 153 553 394 HOH HOH . E 4 HOH A 154 554 395 HOH HOH . E 4 HOH A 155 555 397 HOH HOH . E 4 HOH A 156 556 398 HOH HOH . E 4 HOH A 157 557 399 HOH HOH . E 4 HOH A 158 558 400 HOH HOH . E 4 HOH A 159 559 401 HOH HOH . E 4 HOH A 160 560 402 HOH HOH . E 4 HOH A 161 561 403 HOH HOH . E 4 HOH A 162 562 404 HOH HOH . E 4 HOH A 163 563 409 HOH HOH . E 4 HOH A 164 564 413 HOH HOH . E 4 HOH A 165 565 416 HOH HOH . E 4 HOH A 166 566 418 HOH HOH . E 4 HOH A 167 567 419 HOH HOH . E 4 HOH A 168 568 422 HOH HOH . E 4 HOH A 169 569 423 HOH HOH . E 4 HOH A 170 570 425 HOH HOH . E 4 HOH A 171 571 426 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . C 3 35.678 33.329 56.021 1 40.08 ? N1 IMD 302 A 1 HETATM 2 C C2 IMD . . . C 3 34.721 34.114 55.475 1 39.15 ? C2 IMD 302 A 1 HETATM 3 N N3 IMD . . . C 3 34.258 34.967 56.416 1 27.03 1 N3 IMD 302 A 1 HETATM 4 C C4 IMD . . . C 3 34.929 34.71 57.562 1 34.96 ? C4 IMD 302 A 1 HETATM 5 C C5 IMD . . . C 3 35.824 33.677 57.314 1 35.09 ? C5 IMD 302 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #