data_4XAR # _model_server_result.job_id Eem5dRtafKDluJJb1EPrGw _model_server_result.datetime_utc '2024-12-23 07:00:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xar # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 4XAR # _exptl.entry_id 4XAR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XAR _cell.length_a 80.338 _cell.length_b 80.338 _cell.length_c 155.688 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XAR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 51.896 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 57 1_555 A SG CYS 101 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 363 A CYS 361 1_555 A SG CYS 375 A CYS 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 414 A CYS 412 1_555 A SG CYS 421 A CYS 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XAR _atom_sites.fract_transf_matrix[1][1] 0.012447 _atom_sites.fract_transf_matrix[1][2] 0.007187 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014373 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 40F A 1 601 1 40F SX1 . C 3 IOD A 1 602 1 IOD IOD . D 3 IOD A 1 603 2 IOD IOD . E 3 IOD A 1 604 3 IOD IOD . F 3 IOD A 1 605 4 IOD IOD . G 3 IOD A 1 606 5 IOD IOD . H 3 IOD A 1 607 6 IOD IOD . I 3 IOD A 1 608 7 IOD IOD . J 3 IOD A 1 609 8 IOD IOD . K 4 HOH A 1 701 133 HOH HOH . K 4 HOH A 2 702 147 HOH HOH . K 4 HOH A 3 703 257 HOH HOH . K 4 HOH A 4 704 309 HOH HOH . K 4 HOH A 5 705 207 HOH HOH . K 4 HOH A 6 706 156 HOH HOH . K 4 HOH A 7 707 93 HOH HOH . K 4 HOH A 8 708 45 HOH HOH . K 4 HOH A 9 709 128 HOH HOH . K 4 HOH A 10 710 157 HOH HOH . K 4 HOH A 11 711 154 HOH HOH . K 4 HOH A 12 712 217 HOH HOH . K 4 HOH A 13 713 324 HOH HOH . K 4 HOH A 14 714 188 HOH HOH . K 4 HOH A 15 715 232 HOH HOH . K 4 HOH A 16 716 261 HOH HOH . K 4 HOH A 17 717 176 HOH HOH . K 4 HOH A 18 718 6 HOH HOH . K 4 HOH A 19 719 306 HOH HOH . K 4 HOH A 20 720 46 HOH HOH . K 4 HOH A 21 721 43 HOH HOH . K 4 HOH A 22 722 142 HOH HOH . K 4 HOH A 23 723 149 HOH HOH . K 4 HOH A 24 724 326 HOH HOH . K 4 HOH A 25 725 1 HOH HOH . K 4 HOH A 26 726 2 HOH HOH . K 4 HOH A 27 727 3 HOH HOH . K 4 HOH A 28 728 4 HOH HOH . K 4 HOH A 29 729 5 HOH HOH . K 4 HOH A 30 730 7 HOH HOH . K 4 HOH A 31 731 8 HOH HOH . K 4 HOH A 32 732 9 HOH HOH . K 4 HOH A 33 733 10 HOH HOH . K 4 HOH A 34 734 12 HOH HOH . K 4 HOH A 35 735 13 HOH HOH . K 4 HOH A 36 736 14 HOH HOH . K 4 HOH A 37 737 15 HOH HOH . K 4 HOH A 38 738 16 HOH HOH . K 4 HOH A 39 739 18 HOH HOH . K 4 HOH A 40 740 20 HOH HOH . K 4 HOH A 41 741 23 HOH HOH . K 4 HOH A 42 742 25 HOH HOH . K 4 HOH A 43 743 27 HOH HOH . K 4 HOH A 44 744 29 HOH HOH . K 4 HOH A 45 745 30 HOH HOH . K 4 HOH A 46 746 33 HOH HOH . K 4 HOH A 47 747 35 HOH HOH . K 4 HOH A 48 748 37 HOH HOH . K 4 HOH A 49 749 39 HOH HOH . K 4 HOH A 50 750 40 HOH HOH . K 4 HOH A 51 751 41 HOH HOH . K 4 HOH A 52 752 44 HOH HOH . K 4 HOH A 53 753 47 HOH HOH . K 4 HOH A 54 754 48 HOH HOH . K 4 HOH A 55 755 50 HOH HOH . K 4 HOH A 56 756 53 HOH HOH . K 4 HOH A 57 757 56 HOH HOH . K 4 HOH A 58 758 58 HOH HOH . K 4 HOH A 59 759 59 HOH HOH . K 4 HOH A 60 760 60 HOH HOH . K 4 HOH A 61 761 61 HOH HOH . K 4 HOH A 62 762 62 HOH HOH . K 4 HOH A 63 763 63 HOH HOH . K 4 HOH A 64 764 66 HOH HOH . K 4 HOH A 65 765 67 HOH HOH . K 4 HOH A 66 766 74 HOH HOH . K 4 HOH A 67 767 75 HOH HOH . K 4 HOH A 68 768 78 HOH HOH . K 4 HOH A 69 769 79 HOH HOH . K 4 HOH A 70 770 90 HOH HOH . K 4 HOH A 71 771 95 HOH HOH . K 4 HOH A 72 772 96 HOH HOH . K 4 HOH A 73 773 97 HOH HOH . K 4 HOH A 74 774 99 HOH HOH . K 4 HOH A 75 775 100 HOH HOH . K 4 HOH A 76 776 105 HOH HOH . K 4 HOH A 77 777 106 HOH HOH . K 4 HOH A 78 778 112 HOH HOH . K 4 HOH A 79 779 119 HOH HOH . K 4 HOH A 80 780 124 HOH HOH . K 4 HOH A 81 781 125 HOH HOH . K 4 HOH A 82 782 136 HOH HOH . K 4 HOH A 83 783 137 HOH HOH . K 4 HOH A 84 784 140 HOH HOH . K 4 HOH A 85 785 143 HOH HOH . K 4 HOH A 86 786 144 HOH HOH . K 4 HOH A 87 787 146 HOH HOH . K 4 HOH A 88 788 148 HOH HOH . K 4 HOH A 89 789 150 HOH HOH . K 4 HOH A 90 790 151 HOH HOH . K 4 HOH A 91 791 153 HOH HOH . K 4 HOH A 92 792 158 HOH HOH . K 4 HOH A 93 793 161 HOH HOH . K 4 HOH A 94 794 164 HOH HOH . K 4 HOH A 95 795 172 HOH HOH . K 4 HOH A 96 796 177 HOH HOH . K 4 HOH A 97 797 180 HOH HOH . K 4 HOH A 98 798 184 HOH HOH . K 4 HOH A 99 799 187 HOH HOH . K 4 HOH A 100 800 200 HOH HOH . K 4 HOH A 101 801 203 HOH HOH . K 4 HOH A 102 802 206 HOH HOH . K 4 HOH A 103 803 210 HOH HOH . K 4 HOH A 104 804 219 HOH HOH . K 4 HOH A 105 805 221 HOH HOH . K 4 HOH A 106 806 223 HOH HOH . K 4 HOH A 107 807 229 HOH HOH . K 4 HOH A 108 808 263 HOH HOH . K 4 HOH A 109 809 266 HOH HOH . K 4 HOH A 110 810 304 HOH HOH . K 4 HOH A 111 811 323 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 49.512 _atom_site.Cartn_y -33.94 _atom_site.Cartn_z 9.948 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 34.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 604 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #