data_4XAS
#
_model_server_result.job_id            NUN0nkW0e9Kp2E4IO4mgVA 
_model_server_result.datetime_utc      '2025-04-24 09:35:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xas 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    4XAS 
#
_exptl.entry_id    4XAS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              211.215 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(1R,4S,5S,6S)-4-aminospiro[bicyclo[3.1.0]hexane-2,1'-cyclopropane]-4,6-dicarboxylic acid" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4XAS 
_cell.length_a            78.044 
_cell.length_b            135.858 
_cell.length_c            92.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XAS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 52 A CYS 50 1_555 A SG CYS 94 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 A SG CYS 357 A CYS 355 1_555 A SG CYS 364 A CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 402 A CYS 400 1_555 A SG CYS 409 A CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf4 B SG CYS 52 B CYS 50 1_555 B SG CYS 94 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 B SG CYS 357 B CYS 355 1_555 B SG CYS 364 B CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf6 B SG CYS 402 B CYS 400 1_555 B SG CYS 409 B CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
#
_chem_comp.formula           'C10 H13 N O4' 
_chem_comp.formula_weight    211.215 
_chem_comp.id                40H 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(1R,4S,5S,6S)-4-aminospiro[bicyclo[3.1.0]hexane-2,1'-cyclopropane]-4,6-dicarboxylic acid" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C7 40H sing 1 n n 
C6 C5 40H sing 2 n n 
C7 C5 40H sing 3 n n 
O C8 40H doub 4 n n 
C4 C5 40H sing 5 n n 
C4 C3 40H sing 6 n n 
C4 C2 40H sing 7 n n 
C5 C 40H sing 8 n n 
C8 O1 40H sing 9 n n 
C8 C3 40H sing 10 n n 
C3 C2 40H sing 11 n n 
C2 C1 40H sing 12 n n 
C C1 40H sing 13 n n 
O2 C9 40H doub 14 n n 
C1 C9 40H sing 15 n n 
C1 N 40H sing 16 n n 
C9 O3 40H sing 17 n n 
O1 H1 40H sing 18 n n 
C7 H2 40H sing 19 n n 
C7 H3 40H sing 20 n n 
C6 H4 40H sing 21 n n 
C6 H5 40H sing 22 n n 
C4 H6 40H sing 23 n n 
C3 H7 40H sing 24 n n 
C2 H8 40H sing 25 n n 
O3 H9 40H sing 26 n n 
N H10 40H sing 27 n n 
N H11 40H sing 28 n n 
C H13 40H sing 29 n n 
C H14 40H sing 30 n n 
#
_atom_sites.entry_id                     4XAS 
_atom_sites.fract_transf_matrix[1][1]    0.012813 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007361 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010846 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 40H A 1 601 1 40H SX1 . 
D 2 40H B 1 601 2 40H SX1 . 
E 3 HOH A 1 701 114 HOH HOH . 
E 3 HOH A 2 702 221 HOH HOH . 
E 3 HOH A 3 703 57 HOH HOH . 
E 3 HOH A 4 704 30 HOH HOH . 
E 3 HOH A 5 705 138 HOH HOH . 
E 3 HOH A 6 706 393 HOH HOH . 
E 3 HOH A 7 707 105 HOH HOH . 
E 3 HOH A 8 708 216 HOH HOH . 
E 3 HOH A 9 709 237 HOH HOH . 
E 3 HOH A 10 710 175 HOH HOH . 
E 3 HOH A 11 711 338 HOH HOH . 
E 3 HOH A 12 712 299 HOH HOH . 
E 3 HOH A 13 713 284 HOH HOH . 
E 3 HOH A 14 714 155 HOH HOH . 
E 3 HOH A 15 715 179 HOH HOH . 
E 3 HOH A 16 716 157 HOH HOH . 
E 3 HOH A 17 717 421 HOH HOH . 
E 3 HOH A 18 718 96 HOH HOH . 
E 3 HOH A 19 719 187 HOH HOH . 
E 3 HOH A 20 720 102 HOH HOH . 
E 3 HOH A 21 721 219 HOH HOH . 
E 3 HOH A 22 722 75 HOH HOH . 
E 3 HOH A 23 723 125 HOH HOH . 
E 3 HOH A 24 724 73 HOH HOH . 
E 3 HOH A 25 725 2 HOH HOH . 
E 3 HOH A 26 726 3 HOH HOH . 
E 3 HOH A 27 727 4 HOH HOH . 
E 3 HOH A 28 728 5 HOH HOH . 
E 3 HOH A 29 729 6 HOH HOH . 
E 3 HOH A 30 730 13 HOH HOH . 
E 3 HOH A 31 731 18 HOH HOH . 
E 3 HOH A 32 732 20 HOH HOH . 
E 3 HOH A 33 733 22 HOH HOH . 
E 3 HOH A 34 734 23 HOH HOH . 
E 3 HOH A 35 735 28 HOH HOH . 
E 3 HOH A 36 736 29 HOH HOH . 
E 3 HOH A 37 737 36 HOH HOH . 
E 3 HOH A 38 738 37 HOH HOH . 
E 3 HOH A 39 739 40 HOH HOH . 
E 3 HOH A 40 740 42 HOH HOH . 
E 3 HOH A 41 741 43 HOH HOH . 
E 3 HOH A 42 742 44 HOH HOH . 
E 3 HOH A 43 743 46 HOH HOH . 
E 3 HOH A 44 744 47 HOH HOH . 
E 3 HOH A 45 745 51 HOH HOH . 
E 3 HOH A 46 746 52 HOH HOH . 
E 3 HOH A 47 747 54 HOH HOH . 
E 3 HOH A 48 748 58 HOH HOH . 
E 3 HOH A 49 749 60 HOH HOH . 
E 3 HOH A 50 750 63 HOH HOH . 
E 3 HOH A 51 751 66 HOH HOH . 
E 3 HOH A 52 752 69 HOH HOH . 
E 3 HOH A 53 753 70 HOH HOH . 
E 3 HOH A 54 754 78 HOH HOH . 
E 3 HOH A 55 755 81 HOH HOH . 
E 3 HOH A 56 756 84 HOH HOH . 
E 3 HOH A 57 757 97 HOH HOH . 
E 3 HOH A 58 758 113 HOH HOH . 
E 3 HOH A 59 759 115 HOH HOH . 
E 3 HOH A 60 760 116 HOH HOH . 
E 3 HOH A 61 761 117 HOH HOH . 
E 3 HOH A 62 762 123 HOH HOH . 
E 3 HOH A 63 763 124 HOH HOH . 
E 3 HOH A 64 764 128 HOH HOH . 
E 3 HOH A 65 765 129 HOH HOH . 
E 3 HOH A 66 766 132 HOH HOH . 
E 3 HOH A 67 767 133 HOH HOH . 
E 3 HOH A 68 768 134 HOH HOH . 
E 3 HOH A 69 769 136 HOH HOH . 
E 3 HOH A 70 770 137 HOH HOH . 
E 3 HOH A 71 771 139 HOH HOH . 
E 3 HOH A 72 772 144 HOH HOH . 
E 3 HOH A 73 773 151 HOH HOH . 
E 3 HOH A 74 774 160 HOH HOH . 
E 3 HOH A 75 775 167 HOH HOH . 
E 3 HOH A 76 776 172 HOH HOH . 
E 3 HOH A 77 777 173 HOH HOH . 
E 3 HOH A 78 778 178 HOH HOH . 
E 3 HOH A 79 779 180 HOH HOH . 
E 3 HOH A 80 780 184 HOH HOH . 
E 3 HOH A 81 781 188 HOH HOH . 
E 3 HOH A 82 782 189 HOH HOH . 
E 3 HOH A 83 783 192 HOH HOH . 
E 3 HOH A 84 784 197 HOH HOH . 
E 3 HOH A 85 785 198 HOH HOH . 
E 3 HOH A 86 786 205 HOH HOH . 
E 3 HOH A 87 787 209 HOH HOH . 
E 3 HOH A 88 788 210 HOH HOH . 
E 3 HOH A 89 789 222 HOH HOH . 
E 3 HOH A 90 790 230 HOH HOH . 
E 3 HOH A 91 791 236 HOH HOH . 
E 3 HOH A 92 792 239 HOH HOH . 
E 3 HOH A 93 793 242 HOH HOH . 
E 3 HOH A 94 794 243 HOH HOH . 
E 3 HOH A 95 795 246 HOH HOH . 
E 3 HOH A 96 796 262 HOH HOH . 
E 3 HOH A 97 797 263 HOH HOH . 
E 3 HOH A 98 798 264 HOH HOH . 
E 3 HOH A 99 799 266 HOH HOH . 
E 3 HOH A 100 800 267 HOH HOH . 
E 3 HOH A 101 801 269 HOH HOH . 
E 3 HOH A 102 802 270 HOH HOH . 
E 3 HOH A 103 803 276 HOH HOH . 
E 3 HOH A 104 804 280 HOH HOH . 
E 3 HOH A 105 805 286 HOH HOH . 
E 3 HOH A 106 806 294 HOH HOH . 
E 3 HOH A 107 807 303 HOH HOH . 
E 3 HOH A 108 808 332 HOH HOH . 
E 3 HOH A 109 809 334 HOH HOH . 
E 3 HOH A 110 810 335 HOH HOH . 
E 3 HOH A 111 811 339 HOH HOH . 
E 3 HOH A 112 812 340 HOH HOH . 
E 3 HOH A 113 813 341 HOH HOH . 
E 3 HOH A 114 814 355 HOH HOH . 
E 3 HOH A 115 815 357 HOH HOH . 
E 3 HOH A 116 816 372 HOH HOH . 
E 3 HOH A 117 817 374 HOH HOH . 
E 3 HOH A 118 818 419 HOH HOH . 
E 3 HOH A 119 819 423 HOH HOH . 
F 3 HOH B 1 701 10 HOH HOH . 
F 3 HOH B 2 702 220 HOH HOH . 
F 3 HOH B 3 703 245 HOH HOH . 
F 3 HOH B 4 704 380 HOH HOH . 
F 3 HOH B 5 705 8 HOH HOH . 
F 3 HOH B 6 706 34 HOH HOH . 
F 3 HOH B 7 707 368 HOH HOH . 
F 3 HOH B 8 708 126 HOH HOH . 
F 3 HOH B 9 709 250 HOH HOH . 
F 3 HOH B 10 710 300 HOH HOH . 
F 3 HOH B 11 711 278 HOH HOH . 
F 3 HOH B 12 712 32 HOH HOH . 
F 3 HOH B 13 713 169 HOH HOH . 
F 3 HOH B 14 714 120 HOH HOH . 
F 3 HOH B 15 715 101 HOH HOH . 
F 3 HOH B 16 716 121 HOH HOH . 
F 3 HOH B 17 717 247 HOH HOH . 
F 3 HOH B 18 718 1 HOH HOH . 
F 3 HOH B 19 719 12 HOH HOH . 
F 3 HOH B 20 720 14 HOH HOH . 
F 3 HOH B 21 721 24 HOH HOH . 
F 3 HOH B 22 722 25 HOH HOH . 
F 3 HOH B 23 723 27 HOH HOH . 
F 3 HOH B 24 724 31 HOH HOH . 
F 3 HOH B 25 725 33 HOH HOH . 
F 3 HOH B 26 726 35 HOH HOH . 
F 3 HOH B 27 727 45 HOH HOH . 
F 3 HOH B 28 728 48 HOH HOH . 
F 3 HOH B 29 729 50 HOH HOH . 
F 3 HOH B 30 730 55 HOH HOH . 
F 3 HOH B 31 731 65 HOH HOH . 
F 3 HOH B 32 732 72 HOH HOH . 
F 3 HOH B 33 733 76 HOH HOH . 
F 3 HOH B 34 734 82 HOH HOH . 
F 3 HOH B 35 735 83 HOH HOH . 
F 3 HOH B 36 736 88 HOH HOH . 
F 3 HOH B 37 737 89 HOH HOH . 
F 3 HOH B 38 738 92 HOH HOH . 
F 3 HOH B 39 739 93 HOH HOH . 
F 3 HOH B 40 740 99 HOH HOH . 
F 3 HOH B 41 741 106 HOH HOH . 
F 3 HOH B 42 742 108 HOH HOH . 
F 3 HOH B 43 743 110 HOH HOH . 
F 3 HOH B 44 744 111 HOH HOH . 
F 3 HOH B 45 745 112 HOH HOH . 
F 3 HOH B 46 746 122 HOH HOH . 
F 3 HOH B 47 747 140 HOH HOH . 
F 3 HOH B 48 748 141 HOH HOH . 
F 3 HOH B 49 749 143 HOH HOH . 
F 3 HOH B 50 750 148 HOH HOH . 
F 3 HOH B 51 751 150 HOH HOH . 
F 3 HOH B 52 752 152 HOH HOH . 
F 3 HOH B 53 753 154 HOH HOH . 
F 3 HOH B 54 754 158 HOH HOH . 
F 3 HOH B 55 755 165 HOH HOH . 
F 3 HOH B 56 756 191 HOH HOH . 
F 3 HOH B 57 757 195 HOH HOH . 
F 3 HOH B 58 758 200 HOH HOH . 
F 3 HOH B 59 759 201 HOH HOH . 
F 3 HOH B 60 760 204 HOH HOH . 
F 3 HOH B 61 761 227 HOH HOH . 
F 3 HOH B 62 762 228 HOH HOH . 
F 3 HOH B 63 763 253 HOH HOH . 
F 3 HOH B 64 764 254 HOH HOH . 
F 3 HOH B 65 765 255 HOH HOH . 
F 3 HOH B 66 766 256 HOH HOH . 
F 3 HOH B 67 767 257 HOH HOH . 
F 3 HOH B 68 768 258 HOH HOH . 
F 3 HOH B 69 769 259 HOH HOH . 
F 3 HOH B 70 770 260 HOH HOH . 
F 3 HOH B 71 771 261 HOH HOH . 
F 3 HOH B 72 772 279 HOH HOH . 
F 3 HOH B 73 773 283 HOH HOH . 
F 3 HOH B 74 774 289 HOH HOH . 
F 3 HOH B 75 775 291 HOH HOH . 
F 3 HOH B 76 776 297 HOH HOH . 
F 3 HOH B 77 777 298 HOH HOH . 
F 3 HOH B 78 778 304 HOH HOH . 
F 3 HOH B 79 779 305 HOH HOH . 
F 3 HOH B 80 780 327 HOH HOH . 
F 3 HOH B 81 781 351 HOH HOH . 
F 3 HOH B 82 782 358 HOH HOH . 
F 3 HOH B 83 783 359 HOH HOH . 
F 3 HOH B 84 784 366 HOH HOH . 
F 3 HOH B 85 785 370 HOH HOH . 
F 3 HOH B 86 786 400 HOH HOH . 
F 3 HOH B 87 787 407 HOH HOH . 
F 3 HOH B 88 788 418 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 40H . . . C 2 -24.262 28.732 -26.892 1 27.3 ? O1 40H 601 A 1 
HETATM 2 C C7 40H . . . C 2 -29.154 32.451 -27.999 1 29.76 ? C7 40H 601 A 1 
HETATM 3 O O2 40H . . . C 2 -30.05 30.777 -25.091 1 40.61 ? O2 40H 601 A 1 
HETATM 4 C C6 40H . . . C 2 -27.736 32.845 -28.375 1 28.55 ? C6 40H 601 A 1 
HETATM 5 C C1 40H . . . C 2 -27.689 31.216 -24.917 1 37.75 ? C1 40H 601 A 1 
HETATM 6 C C5 40H . . . C 2 -27.968 31.94 -27.222 1 31.87 ? C5 40H 601 A 1 
HETATM 7 C C4 40H . . . C 2 -27.561 30.476 -27.286 1 31.49 ? C4 40H 601 A 1 
HETATM 8 C C3 40H . . . C 2 -26.178 30.122 -26.754 1 30.8 ? C3 40H 601 A 1 
HETATM 9 C C2 40H . . . C 2 -27.409 30.011 -25.846 1 32.26 ? C2 40H 601 A 1 
HETATM 10 O O3 40H . . . C 2 -29.274 31.222 -23.098 1 40.29 ? O3 40H 601 A 1 
HETATM 11 C C9 40H . . . C 2 -29.043 31.078 -24.26 1 38.44 ? C9 40H 601 A 1 
HETATM 12 N N 40H . . . C 2 -26.663 31.345 -23.867 1 39.12 ? N 40H 601 A 1 
HETATM 13 C C8 40H . . . C 2 -25.593 28.797 -27.043 1 31.02 ? C8 40H 601 A 1 
HETATM 14 O O 40H . . . C 2 -26.222 27.759 -27.363 1 29.36 ? O 40H 601 A 1 
HETATM 15 C C 40H . . . C 2 -27.749 32.461 -25.843 1 33.79 ? C 40H 601 A 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#