data_4XDH # _model_server_result.job_id l_6H0plcJz0xr0sYjltggg _model_server_result.datetime_utc '2024-11-23 19:47:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xdh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":305}' # _entry.id 4XDH # _exptl.entry_id 4XDH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XDH _cell.length_a 56.51 _cell.length_b 84.03 _cell.length_c 106.42 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XDH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 178 A HIS 177 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A O CYS 223 A CYS 222 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc3 A SG CYS 223 A CYS 222 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc4 B O CYS 223 B CYS 222 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc5 B SG CYS 223 B CYS 222 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 416 n n S O2 SO4 doub 417 n n S O3 SO4 sing 418 n n S O4 SO4 sing 419 n n # _atom_sites.entry_id 4XDH _atom_sites.fract_transf_matrix[1][1] 0.017696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 231 ZN ZN . D 3 FAD A 1 302 232 FAD FAD . E 4 3ZV A 1 303 233 3ZV XXX . F 5 SO4 A 1 304 1 SO4 SO4 . G 5 SO4 A 1 305 2 SO4 SO4 . H 5 SO4 A 1 306 3 SO4 SO4 . I 2 ZN B 1 301 231 ZN ZN . J 3 FAD B 1 302 232 FAD FAD . K 4 3ZV B 1 303 233 3ZV XXX . L 6 HOH A 1 401 236 HOH HOH . L 6 HOH A 2 402 118 HOH HOH . L 6 HOH A 3 403 114 HOH HOH . L 6 HOH A 4 404 202 HOH HOH . L 6 HOH A 5 405 66 HOH HOH . L 6 HOH A 6 406 138 HOH HOH . L 6 HOH A 7 407 6 HOH HOH . L 6 HOH A 8 408 72 HOH HOH . L 6 HOH A 9 409 100 HOH HOH . L 6 HOH A 10 410 226 HOH HOH . L 6 HOH A 11 411 153 HOH HOH . L 6 HOH A 12 412 261 HOH HOH . L 6 HOH A 13 413 147 HOH HOH . L 6 HOH A 14 414 83 HOH HOH . L 6 HOH A 15 415 107 HOH HOH . L 6 HOH A 16 416 231 HOH HOH . L 6 HOH A 17 417 102 HOH HOH . L 6 HOH A 18 418 171 HOH HOH . L 6 HOH A 19 419 240 HOH HOH . L 6 HOH A 20 420 89 HOH HOH . L 6 HOH A 21 421 52 HOH HOH . L 6 HOH A 22 422 233 HOH HOH . L 6 HOH A 23 423 128 HOH HOH . L 6 HOH A 24 424 33 HOH HOH . L 6 HOH A 25 425 210 HOH HOH . L 6 HOH A 26 426 16 HOH HOH . L 6 HOH A 27 427 238 HOH HOH . L 6 HOH A 28 428 237 HOH HOH . L 6 HOH A 29 429 135 HOH HOH . L 6 HOH A 30 430 234 HOH HOH . L 6 HOH A 31 431 29 HOH HOH . L 6 HOH A 32 432 245 HOH HOH . L 6 HOH A 33 433 2 HOH HOH . L 6 HOH A 34 434 4 HOH HOH . L 6 HOH A 35 435 5 HOH HOH . L 6 HOH A 36 436 8 HOH HOH . L 6 HOH A 37 437 11 HOH HOH . L 6 HOH A 38 438 13 HOH HOH . L 6 HOH A 39 439 17 HOH HOH . L 6 HOH A 40 440 20 HOH HOH . L 6 HOH A 41 441 21 HOH HOH . L 6 HOH A 42 442 27 HOH HOH . L 6 HOH A 43 443 28 HOH HOH . L 6 HOH A 44 444 30 HOH HOH . L 6 HOH A 45 445 37 HOH HOH . L 6 HOH A 46 446 41 HOH HOH . L 6 HOH A 47 447 51 HOH HOH . L 6 HOH A 48 448 57 HOH HOH . L 6 HOH A 49 449 58 HOH HOH . L 6 HOH A 50 450 60 HOH HOH . L 6 HOH A 51 451 61 HOH HOH . L 6 HOH A 52 452 64 HOH HOH . L 6 HOH A 53 453 69 HOH HOH . L 6 HOH A 54 454 74 HOH HOH . L 6 HOH A 55 455 75 HOH HOH . L 6 HOH A 56 456 76 HOH HOH . L 6 HOH A 57 457 78 HOH HOH . L 6 HOH A 58 458 79 HOH HOH . L 6 HOH A 59 459 80 HOH HOH . L 6 HOH A 60 460 82 HOH HOH . L 6 HOH A 61 461 87 HOH HOH . L 6 HOH A 62 462 88 HOH HOH . L 6 HOH A 63 463 90 HOH HOH . L 6 HOH A 64 464 92 HOH HOH . L 6 HOH A 65 465 97 HOH HOH . L 6 HOH A 66 466 104 HOH HOH . L 6 HOH A 67 467 110 HOH HOH . L 6 HOH A 68 468 116 HOH HOH . L 6 HOH A 69 469 125 HOH HOH . L 6 HOH A 70 470 126 HOH HOH . L 6 HOH A 71 471 130 HOH HOH . L 6 HOH A 72 472 132 HOH HOH . L 6 HOH A 73 473 133 HOH HOH . L 6 HOH A 74 474 134 HOH HOH . L 6 HOH A 75 475 142 HOH HOH . L 6 HOH A 76 476 145 HOH HOH . L 6 HOH A 77 477 150 HOH HOH . L 6 HOH A 78 478 151 HOH HOH . L 6 HOH A 79 479 152 HOH HOH . L 6 HOH A 80 480 158 HOH HOH . L 6 HOH A 81 481 159 HOH HOH . L 6 HOH A 82 482 162 HOH HOH . L 6 HOH A 83 483 164 HOH HOH . L 6 HOH A 84 484 166 HOH HOH . L 6 HOH A 85 485 167 HOH HOH . L 6 HOH A 86 486 168 HOH HOH . L 6 HOH A 87 487 172 HOH HOH . L 6 HOH A 88 488 173 HOH HOH . L 6 HOH A 89 489 182 HOH HOH . L 6 HOH A 90 490 185 HOH HOH . L 6 HOH A 91 491 191 HOH HOH . L 6 HOH A 92 492 192 HOH HOH . L 6 HOH A 93 493 196 HOH HOH . L 6 HOH A 94 494 199 HOH HOH . L 6 HOH A 95 495 200 HOH HOH . L 6 HOH A 96 496 204 HOH HOH . L 6 HOH A 97 497 217 HOH HOH . L 6 HOH A 98 498 219 HOH HOH . L 6 HOH A 99 499 220 HOH HOH . L 6 HOH A 100 500 222 HOH HOH . L 6 HOH A 101 501 225 HOH HOH . L 6 HOH A 102 502 228 HOH HOH . L 6 HOH A 103 503 229 HOH HOH . L 6 HOH A 104 504 239 HOH HOH . L 6 HOH A 105 505 246 HOH HOH . L 6 HOH A 106 506 256 HOH HOH . L 6 HOH A 107 507 262 HOH HOH . L 6 HOH A 108 508 264 HOH HOH . L 6 HOH A 109 509 265 HOH HOH . L 6 HOH A 110 510 266 HOH HOH . M 6 HOH B 1 401 257 HOH HOH . M 6 HOH B 2 402 15 HOH HOH . M 6 HOH B 3 403 235 HOH HOH . M 6 HOH B 4 404 73 HOH HOH . M 6 HOH B 5 405 10 HOH HOH . M 6 HOH B 6 406 174 HOH HOH . M 6 HOH B 7 407 198 HOH HOH . M 6 HOH B 8 408 54 HOH HOH . M 6 HOH B 9 409 216 HOH HOH . M 6 HOH B 10 410 109 HOH HOH . M 6 HOH B 11 411 77 HOH HOH . M 6 HOH B 12 412 63 HOH HOH . M 6 HOH B 13 413 99 HOH HOH . M 6 HOH B 14 414 223 HOH HOH . M 6 HOH B 15 415 193 HOH HOH . M 6 HOH B 16 416 140 HOH HOH . M 6 HOH B 17 417 194 HOH HOH . M 6 HOH B 18 418 53 HOH HOH . M 6 HOH B 19 419 81 HOH HOH . M 6 HOH B 20 420 215 HOH HOH . M 6 HOH B 21 421 190 HOH HOH . M 6 HOH B 22 422 255 HOH HOH . M 6 HOH B 23 423 103 HOH HOH . M 6 HOH B 24 424 26 HOH HOH . M 6 HOH B 25 425 34 HOH HOH . M 6 HOH B 26 426 22 HOH HOH . M 6 HOH B 27 427 209 HOH HOH . M 6 HOH B 28 428 121 HOH HOH . M 6 HOH B 29 429 163 HOH HOH . M 6 HOH B 30 430 25 HOH HOH . M 6 HOH B 31 431 117 HOH HOH . M 6 HOH B 32 432 48 HOH HOH . M 6 HOH B 33 433 144 HOH HOH . M 6 HOH B 34 434 122 HOH HOH . M 6 HOH B 35 435 154 HOH HOH . M 6 HOH B 36 436 155 HOH HOH . M 6 HOH B 37 437 149 HOH HOH . M 6 HOH B 38 438 208 HOH HOH . M 6 HOH B 39 439 206 HOH HOH . M 6 HOH B 40 440 232 HOH HOH . M 6 HOH B 41 441 19 HOH HOH . M 6 HOH B 42 442 253 HOH HOH . M 6 HOH B 43 443 186 HOH HOH . M 6 HOH B 44 444 205 HOH HOH . M 6 HOH B 45 445 221 HOH HOH . M 6 HOH B 46 446 1 HOH HOH . M 6 HOH B 47 447 7 HOH HOH . M 6 HOH B 48 448 9 HOH HOH . M 6 HOH B 49 449 12 HOH HOH . M 6 HOH B 50 450 14 HOH HOH . M 6 HOH B 51 451 18 HOH HOH . M 6 HOH B 52 452 23 HOH HOH . M 6 HOH B 53 453 24 HOH HOH . M 6 HOH B 54 454 31 HOH HOH . M 6 HOH B 55 455 32 HOH HOH . M 6 HOH B 56 456 35 HOH HOH . M 6 HOH B 57 457 36 HOH HOH . M 6 HOH B 58 458 38 HOH HOH . M 6 HOH B 59 459 39 HOH HOH . M 6 HOH B 60 460 40 HOH HOH . M 6 HOH B 61 461 42 HOH HOH . M 6 HOH B 62 462 43 HOH HOH . M 6 HOH B 63 463 44 HOH HOH . M 6 HOH B 64 464 45 HOH HOH . M 6 HOH B 65 465 46 HOH HOH . M 6 HOH B 66 466 47 HOH HOH . M 6 HOH B 67 467 49 HOH HOH . M 6 HOH B 68 468 50 HOH HOH . M 6 HOH B 69 469 55 HOH HOH . M 6 HOH B 70 470 56 HOH HOH . M 6 HOH B 71 471 59 HOH HOH . M 6 HOH B 72 472 62 HOH HOH . M 6 HOH B 73 473 65 HOH HOH . M 6 HOH B 74 474 67 HOH HOH . M 6 HOH B 75 475 68 HOH HOH . M 6 HOH B 76 476 70 HOH HOH . M 6 HOH B 77 477 71 HOH HOH . M 6 HOH B 78 478 84 HOH HOH . M 6 HOH B 79 479 85 HOH HOH . M 6 HOH B 80 480 86 HOH HOH . M 6 HOH B 81 481 91 HOH HOH . M 6 HOH B 82 482 93 HOH HOH . M 6 HOH B 83 483 94 HOH HOH . M 6 HOH B 84 484 95 HOH HOH . M 6 HOH B 85 485 96 HOH HOH . M 6 HOH B 86 486 98 HOH HOH . M 6 HOH B 87 487 101 HOH HOH . M 6 HOH B 88 488 105 HOH HOH . M 6 HOH B 89 489 106 HOH HOH . M 6 HOH B 90 490 108 HOH HOH . M 6 HOH B 91 491 111 HOH HOH . M 6 HOH B 92 492 112 HOH HOH . M 6 HOH B 93 493 113 HOH HOH . M 6 HOH B 94 494 115 HOH HOH . M 6 HOH B 95 495 119 HOH HOH . M 6 HOH B 96 496 120 HOH HOH . M 6 HOH B 97 497 124 HOH HOH . M 6 HOH B 98 498 127 HOH HOH . M 6 HOH B 99 499 129 HOH HOH . M 6 HOH B 100 500 131 HOH HOH . M 6 HOH B 101 501 136 HOH HOH . M 6 HOH B 102 502 137 HOH HOH . M 6 HOH B 103 503 139 HOH HOH . M 6 HOH B 104 504 141 HOH HOH . M 6 HOH B 105 505 143 HOH HOH . M 6 HOH B 106 506 146 HOH HOH . M 6 HOH B 107 507 148 HOH HOH . M 6 HOH B 108 508 156 HOH HOH . M 6 HOH B 109 509 157 HOH HOH . M 6 HOH B 110 510 160 HOH HOH . M 6 HOH B 111 511 161 HOH HOH . M 6 HOH B 112 512 165 HOH HOH . M 6 HOH B 113 513 170 HOH HOH . M 6 HOH B 114 514 175 HOH HOH . M 6 HOH B 115 515 176 HOH HOH . M 6 HOH B 116 516 177 HOH HOH . M 6 HOH B 117 517 178 HOH HOH . M 6 HOH B 118 518 179 HOH HOH . M 6 HOH B 119 519 180 HOH HOH . M 6 HOH B 120 520 181 HOH HOH . M 6 HOH B 121 521 183 HOH HOH . M 6 HOH B 122 522 184 HOH HOH . M 6 HOH B 123 523 188 HOH HOH . M 6 HOH B 124 524 189 HOH HOH . M 6 HOH B 125 525 201 HOH HOH . M 6 HOH B 126 526 203 HOH HOH . M 6 HOH B 127 527 211 HOH HOH . M 6 HOH B 128 528 212 HOH HOH . M 6 HOH B 129 529 214 HOH HOH . M 6 HOH B 130 530 218 HOH HOH . M 6 HOH B 131 531 224 HOH HOH . M 6 HOH B 132 532 227 HOH HOH . M 6 HOH B 133 533 230 HOH HOH . M 6 HOH B 134 534 241 HOH HOH . M 6 HOH B 135 535 242 HOH HOH . M 6 HOH B 136 536 243 HOH HOH . M 6 HOH B 137 537 244 HOH HOH . M 6 HOH B 138 538 247 HOH HOH . M 6 HOH B 139 539 251 HOH HOH . M 6 HOH B 140 540 252 HOH HOH . M 6 HOH B 141 541 254 HOH HOH . M 6 HOH B 142 542 258 HOH HOH . M 6 HOH B 143 543 259 HOH HOH . M 6 HOH B 144 544 260 HOH HOH . M 6 HOH B 145 545 263 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 5 -17.485 9.889 15.583 1 114.52 ? S SO4 305 A 1 HETATM 2 O O1 SO4 . . . G 5 -16.741 10.619 14.551 1 114.66 ? O1 SO4 305 A 1 HETATM 3 O O2 SO4 . . . G 5 -18.374 8.916 14.937 1 114.32 ? O2 SO4 305 A 1 HETATM 4 O O3 SO4 . . . G 5 -16.548 9.184 16.462 1 114.09 ? O3 SO4 305 A 1 HETATM 5 O O4 SO4 . . . G 5 -18.268 10.838 16.377 1 113.93 ? O4 SO4 305 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #