data_4XE6 # _model_server_result.job_id h0r2fw3CcZXHI8iAdi765w _model_server_result.datetime_utc '2024-11-07 02:56:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xe6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4XE6 # _exptl.entry_id 4XE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 373.451 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-ethyl-5-{(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XE6 _cell.length_a 78.902 _cell.length_b 78.902 _cell.length_c 108.118 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H23 N5 O' _chem_comp.formula_weight 373.451 _chem_comp.id 06U _chem_comp.mon_nstd_flag . _chem_comp.name 6-ethyl-5-{(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 N1 06U doub 1 n y N1 C6 06U sing 2 n y N3 C2 06U sing 3 n y NAH C2 06U sing 4 n n N3 C4 06U doub 5 n y CAI C4 06U sing 6 n n C4 C5 06U sing 7 n y C5 CAK 06U sing 8 n n C5 C6 06U doub 9 n y C6 NAJ 06U sing 10 n n CAY CAA 06U doub 11 n y CAA CAU 06U sing 12 n y CAA HAA 06U sing 13 n n NAH HNAH 06U sing 14 n n NAH HNAA 06U sing 15 n n CAZ CAI 06U sing 16 n n CAI HAI 06U sing 17 n n CAI HAIA 06U sing 18 n n NAJ HNAJ 06U sing 19 n n NAJ HNAB 06U sing 20 n n CAK CAL 06U trip 21 n n CAL CAM 06U sing 22 n n CAO CAM 06U sing 23 n n CAM CAN 06U sing 24 n n CAM HAM 06U sing 25 n n CAN HAN 06U sing 26 n n CAN HANA 06U sing 27 n n CAN HANB 06U sing 28 n n CAP CAO 06U doub 29 n y CAT CAO 06U sing 30 n y CAQ CAP 06U sing 31 n y CAP HAP 06U sing 32 n n OBA CAQ 06U sing 33 n n CAR CAQ 06U doub 34 n y CAR CAS 06U sing 35 n y CAR HAR 06U sing 36 n n CAU CAS 06U sing 37 n y CAS CAT 06U doub 38 n y CAT HAT 06U sing 39 n n CAU CAV 06U doub 40 n y CAW CAV 06U sing 41 n y CAV HAV 06U sing 42 n n NAX CAW 06U doub 43 n y CAW HAW 06U sing 44 n n CAY NAX 06U sing 45 n y CAY HAY 06U sing 46 n n CAZ HAZ 06U sing 47 n n CAZ HAZA 06U sing 48 n n CAZ HAZB 06U sing 49 n n OBA CBB 06U sing 50 n n CBB HBB 06U sing 51 n n CBB HBBA 06U sing 52 n n CBB HBBB 06U sing 53 n n # _atom_sites.entry_id 4XE6 _atom_sites.fract_transf_matrix[1][1] 0.012674 _atom_sites.fract_transf_matrix[1][2] 0.007317 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009249 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 06U X 1 201 1 06U DRG . C 3 ACT X 1 202 701 ACT ACT . D 4 NDP X 1 203 207 NDP NAP . E 5 HOH X 1 301 26 HOH HOH . E 5 HOH X 2 302 12 HOH HOH . E 5 HOH X 3 303 32 HOH HOH . E 5 HOH X 4 304 8 HOH HOH . E 5 HOH X 5 305 30 HOH HOH . E 5 HOH X 6 306 6 HOH HOH . E 5 HOH X 7 307 19 HOH HOH . E 5 HOH X 8 308 15 HOH HOH . E 5 HOH X 9 309 40 HOH HOH . E 5 HOH X 10 310 27 HOH HOH . E 5 HOH X 11 311 24 HOH HOH . E 5 HOH X 12 312 36 HOH HOH . E 5 HOH X 13 313 23 HOH HOH . E 5 HOH X 14 314 16 HOH HOH . E 5 HOH X 15 315 35 HOH HOH . E 5 HOH X 16 316 1 HOH HOH . E 5 HOH X 17 317 2 HOH HOH . E 5 HOH X 18 318 4 HOH HOH . E 5 HOH X 19 319 9 HOH HOH . E 5 HOH X 20 320 10 HOH HOH . E 5 HOH X 21 321 14 HOH HOH . E 5 HOH X 22 322 18 HOH HOH . E 5 HOH X 23 323 21 HOH HOH . E 5 HOH X 24 324 22 HOH HOH . E 5 HOH X 25 325 25 HOH HOH . E 5 HOH X 26 326 28 HOH HOH . E 5 HOH X 27 327 31 HOH HOH . E 5 HOH X 28 328 33 HOH HOH . E 5 HOH X 29 329 34 HOH HOH . E 5 HOH X 30 330 37 HOH HOH . E 5 HOH X 31 331 41 HOH HOH . E 5 HOH X 32 332 42 HOH HOH . E 5 HOH X 33 333 43 HOH HOH . E 5 HOH X 34 334 44 HOH HOH . E 5 HOH X 35 335 45 HOH HOH . E 5 HOH X 36 336 46 HOH HOH . E 5 HOH X 37 337 47 HOH HOH . E 5 HOH X 38 338 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 06U . . . B 2 34.027 40.824 111.827 1 19.76 ? N1 06U 201 X 1 HETATM 2 C C2 06U . . . B 2 32.799 40.974 112.353 1 22.89 ? C2 06U 201 X 1 HETATM 3 N N3 06U . . . B 2 32.398 40.209 113.375 1 22.24 ? N3 06U 201 X 1 HETATM 4 C C4 06U . . . B 2 33.199 39.29 113.915 1 20.2 ? C4 06U 201 X 1 HETATM 5 C C5 06U . . . B 2 34.458 39.103 113.399 1 21.52 ? C5 06U 201 X 1 HETATM 6 C C6 06U . . . B 2 34.856 39.907 112.339 1 20.07 ? C6 06U 201 X 1 HETATM 7 C CAA 06U . . . B 2 32.694 31.812 115.551 1 50.47 ? CAA 06U 201 X 1 HETATM 8 N NAH 06U . . . B 2 31.958 41.886 111.866 1 23.91 ? NAH 06U 201 X 1 HETATM 9 C CAI 06U . . . B 2 32.767 38.512 114.967 1 22.53 ? CAI 06U 201 X 1 HETATM 10 N NAJ 06U . . . B 2 36.076 39.728 111.864 1 20.65 ? NAJ 06U 201 X 1 HETATM 11 C CAK 06U . . . B 2 35.285 38.101 113.993 1 25.4 ? CAK 06U 201 X 1 HETATM 12 C CAL 06U . . . B 2 36.021 37.177 114.568 1 28.49 ? CAL 06U 201 X 1 HETATM 13 C CAM 06U . . . B 2 36.892 36.183 115.156 1 29.23 ? CAM 06U 201 X 1 HETATM 14 C CAN 06U . . . B 2 37.671 35.589 114.007 1 38.42 ? CAN 06U 201 X 1 HETATM 15 C CAO 06U . . . B 2 36.209 35.136 115.748 1 36.15 ? CAO 06U 201 X 1 HETATM 16 C CAP 06U . . . B 2 36.631 34.658 116.984 1 38.02 ? CAP 06U 201 X 1 HETATM 17 C CAQ 06U . . . B 2 35.976 33.593 117.61 1 38.39 ? CAQ 06U 201 X 1 HETATM 18 C CAR 06U . . . B 2 34.884 32.994 116.963 1 34.14 ? CAR 06U 201 X 1 HETATM 19 C CAS 06U . . . B 2 34.455 33.476 115.715 1 42.76 ? CAS 06U 201 X 1 HETATM 20 C CAT 06U . . . B 2 35.133 34.532 115.099 1 38.27 ? CAT 06U 201 X 1 HETATM 21 C CAU 06U . . . B 2 33.392 32.889 115.025 1 40.48 ? CAU 06U 201 X 1 HETATM 22 C CAV 06U . . . B 2 33.054 33.362 113.763 1 42.42 ? CAV 06U 201 X 1 HETATM 23 C CAW 06U . . . B 2 32.015 32.795 113.026 1 50.43 ? CAW 06U 201 X 1 HETATM 24 N NAX 06U . . . B 2 31.309 31.712 113.555 1 50.96 ? NAX 06U 201 X 1 HETATM 25 C CAY 06U . . . B 2 31.656 31.23 114.825 1 57.4 ? CAY 06U 201 X 1 HETATM 26 C CAZ 06U . . . B 2 31.677 37.585 114.429 1 27.04 ? CAZ 06U 201 X 1 HETATM 27 O OBA 06U . . . B 2 36.444 33.18 118.841 1 33.92 ? OBA 06U 201 X 1 HETATM 28 C CBB 06U . . . B 2 35.714 32.088 119.405 1 41.65 ? CBB 06U 201 X 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #