data_4XES # _model_server_result.job_id FbwPLZFRfXxj1l21DHPZKw _model_server_result.datetime_utc '2025-02-05 10:54:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xes # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1211}' # _entry.id 4XES # _exptl.entry_id 4XES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XES _cell.length_a 49.84 _cell.length_b 88.44 _cell.length_c 161.33 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XES _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 L N N ? 6 M N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 110 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 142 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 193 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 225 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.046 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 103 n n N1 C6 EPE sing 104 n n N1 C9 EPE sing 105 n n C2 C3 EPE sing 106 n n C2 H21 EPE sing 107 n n C2 H22 EPE sing 108 n n C3 N4 EPE sing 109 n n C3 H31 EPE sing 110 n n C3 H32 EPE sing 111 n n N4 C5 EPE sing 112 n n N4 C7 EPE sing 113 n n C5 C6 EPE sing 114 n n C5 H51 EPE sing 115 n n C5 H52 EPE sing 116 n n C6 H61 EPE sing 117 n n C6 H62 EPE sing 118 n n C7 C8 EPE sing 119 n n C7 H71 EPE sing 120 n n C7 H72 EPE sing 121 n n C8 O8 EPE sing 122 n n C8 H81 EPE sing 123 n n C8 H82 EPE sing 124 n n O8 HO8 EPE sing 125 n n C9 C10 EPE sing 126 n n C9 H91 EPE sing 127 n n C9 H92 EPE sing 128 n n C10 S EPE sing 129 n n C10 H101 EPE sing 130 n n C10 H102 EPE sing 131 n n S O1S EPE doub 132 n n S O2S EPE doub 133 n n S O3S EPE sing 134 n n O3S HOS3 EPE sing 135 n n # _atom_sites.entry_id 4XES _atom_sites.fract_transf_matrix[1][1] 0.020064 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011307 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006198 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CIT A 1 1201 1 CIT CIT . D 4 PEG A 1 1202 1 PEG PEG . E 4 PEG A 1 1203 2 PEG PEG . F 4 PEG A 1 1204 5 PEG PEG . G 4 PEG A 1 1205 6 PEG PEG . H 4 PEG A 1 1206 8 PEG PEG . I 5 GOL A 1 1207 1 GOL GOL . J 5 GOL A 1 1208 4 GOL GOL . K 5 GOL A 1 1209 5 GOL GOL . L 6 EPE A 1 1210 1 EPE EPE . M 6 EPE A 1 1211 2 EPE EPE . N 7 HOH A 1 1301 10 HOH HOH . N 7 HOH A 2 1302 37 HOH HOH . N 7 HOH A 3 1303 11 HOH HOH . N 7 HOH A 4 1304 9 HOH HOH . N 7 HOH A 5 1305 53 HOH HOH . N 7 HOH A 6 1306 6 HOH HOH . N 7 HOH A 7 1307 13 HOH HOH . N 7 HOH A 8 1308 14 HOH HOH . N 7 HOH A 9 1309 1 HOH HOH . N 7 HOH A 10 1310 48 HOH HOH . N 7 HOH A 11 1311 49 HOH HOH . N 7 HOH A 12 1312 25 HOH HOH . N 7 HOH A 13 1313 47 HOH HOH . N 7 HOH A 14 1314 43 HOH HOH . N 7 HOH A 15 1315 38 HOH HOH . N 7 HOH A 16 1316 4 HOH HOH . N 7 HOH A 17 1317 30 HOH HOH . N 7 HOH A 18 1318 54 HOH HOH . N 7 HOH A 19 1319 17 HOH HOH . N 7 HOH A 20 1320 32 HOH HOH . N 7 HOH A 21 1321 50 HOH HOH . N 7 HOH A 22 1322 42 HOH HOH . N 7 HOH A 23 1323 41 HOH HOH . N 7 HOH A 24 1324 12 HOH HOH . N 7 HOH A 25 1325 33 HOH HOH . N 7 HOH A 26 1326 15 HOH HOH . N 7 HOH A 27 1327 40 HOH HOH . N 7 HOH A 28 1328 36 HOH HOH . N 7 HOH A 29 1329 39 HOH HOH . N 7 HOH A 30 1330 52 HOH HOH . N 7 HOH A 31 1331 22 HOH HOH . N 7 HOH A 32 1332 8 HOH HOH . N 7 HOH A 33 1333 3 HOH HOH . N 7 HOH A 34 1334 19 HOH HOH . N 7 HOH A 35 1335 18 HOH HOH . N 7 HOH A 36 1336 24 HOH HOH . N 7 HOH A 37 1337 27 HOH HOH . N 7 HOH A 38 1338 26 HOH HOH . N 7 HOH A 39 1339 21 HOH HOH . N 7 HOH A 40 1340 20 HOH HOH . N 7 HOH A 41 1341 44 HOH HOH . N 7 HOH A 42 1342 34 HOH HOH . N 7 HOH A 43 1343 35 HOH HOH . N 7 HOH A 44 1344 28 HOH HOH . N 7 HOH A 45 1345 31 HOH HOH . N 7 HOH A 46 1346 29 HOH HOH . N 7 HOH A 47 1347 16 HOH HOH . N 7 HOH A 48 1348 45 HOH HOH . N 7 HOH A 49 1349 55 HOH HOH . N 7 HOH A 50 1350 5 HOH HOH . N 7 HOH A 51 1351 46 HOH HOH . N 7 HOH A 52 1352 23 HOH HOH . N 7 HOH A 53 1353 51 HOH HOH . O 7 HOH B 1 101 7 HOH HOH . O 7 HOH B 2 102 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . M 6 -13.838 19.421 -13.677 1 96.24 ? N1 EPE 1211 A 1 HETATM 2 C C2 EPE . . . M 6 -13.968 18.762 -12.359 1 95.25 ? C2 EPE 1211 A 1 HETATM 3 C C3 EPE . . . M 6 -14.731 17.441 -12.487 1 91.5 ? C3 EPE 1211 A 1 HETATM 4 N N4 EPE . . . M 6 -16.066 17.665 -13.076 1 89.63 ? N4 EPE 1211 A 1 HETATM 5 C C5 EPE . . . M 6 -15.95 18.343 -14.387 1 90.42 ? C5 EPE 1211 A 1 HETATM 6 C C6 EPE . . . M 6 -15.185 19.662 -14.245 1 92.76 ? C6 EPE 1211 A 1 HETATM 7 C C7 EPE . . . M 6 -16.788 16.382 -13.196 1 85.4 ? C7 EPE 1211 A 1 HETATM 8 C C8 EPE . . . M 6 -18.16 16.465 -12.53 1 85 ? C8 EPE 1211 A 1 HETATM 9 O O8 EPE . . . M 6 -18.074 17.096 -11.244 1 82.72 ? O8 EPE 1211 A 1 HETATM 10 C C9 EPE . . . M 6 -13.051 20.673 -13.568 1 97.9 ? C9 EPE 1211 A 1 HETATM 11 C C10 EPE . . . M 6 -11.923 20.702 -14.609 1 102.64 ? C10 EPE 1211 A 1 HETATM 12 S S EPE . . . M 6 -10.472 20.15 -13.987 1 113.7 ? S EPE 1211 A 1 HETATM 13 O O1S EPE . . . M 6 -9.366 20.329 -14.961 1 99.72 ? O1S EPE 1211 A 1 HETATM 14 O O2S EPE . . . M 6 -10.612 18.703 -13.71 1 121.63 ? O2S EPE 1211 A 1 HETATM 15 O O3S EPE . . . M 6 -10.147 20.84 -12.714 1 111.49 ? O3S EPE 1211 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #