data_4XF1 # _model_server_result.job_id QWsWew4IdrUxII36cbl_Xw _model_server_result.datetime_utc '2024-11-30 11:19:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xf1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4XF1 # _exptl.entry_id 4XF1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 121.158 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYSTEINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XF1 _cell.length_a 57.6 _cell.length_b 57.6 _cell.length_c 122.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XF1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 A NE2 HIS 88 A HIS 88 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc3 A NE2 HIS 140 A HIS 140 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc4 B FE FE . A FE 501 1_555 C N CYS . A CYS 502 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.298 ? metalc ? metalc5 B FE FE . A FE 501 1_555 C SG CYS . A CYS 502 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.32 ? metalc ? metalc6 B FE FE . A FE 501 1_555 C SG CYS . A CYS 502 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.198 ? # _chem_comp.formula 'C3 H7 N O2 S' _chem_comp.formula_weight 121.158 _chem_comp.id CYS _chem_comp.mon_nstd_flag y _chem_comp.name CYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA CYS sing 70 n n N H CYS sing 71 n n N H2 CYS sing 72 n n CA C CYS sing 73 n n CA CB CYS sing 74 n n CA HA CYS sing 75 n n C O CYS doub 76 n n C OXT CYS sing 77 n n CB SG CYS sing 78 n n CB HB2 CYS sing 79 n n CB HB3 CYS sing 80 n n SG HG CYS sing 81 n n OXT HXT CYS sing 82 n n # _atom_sites.entry_id 4XF1 _atom_sites.fract_transf_matrix[1][1] 0.017361 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 501 501 FE FE . C 3 CYS A 1 502 502 CYS CYS . D 4 HOH A 1 601 125 HOH HOH . D 4 HOH A 2 602 67 HOH HOH . D 4 HOH A 3 603 28 HOH HOH . D 4 HOH A 4 604 15 HOH HOH . D 4 HOH A 5 605 13 HOH HOH . D 4 HOH A 6 606 133 HOH HOH . D 4 HOH A 7 607 64 HOH HOH . D 4 HOH A 8 608 70 HOH HOH . D 4 HOH A 9 609 99 HOH HOH . D 4 HOH A 10 610 46 HOH HOH . D 4 HOH A 11 611 71 HOH HOH . D 4 HOH A 12 612 31 HOH HOH . D 4 HOH A 13 613 63 HOH HOH . D 4 HOH A 14 614 128 HOH HOH . D 4 HOH A 15 615 53 HOH HOH . D 4 HOH A 16 616 2 HOH HOH . D 4 HOH A 17 617 93 HOH HOH . D 4 HOH A 18 618 5 HOH HOH . D 4 HOH A 19 619 134 HOH HOH . D 4 HOH A 20 620 78 HOH HOH . D 4 HOH A 21 621 45 HOH HOH . D 4 HOH A 22 622 72 HOH HOH . D 4 HOH A 23 623 98 HOH HOH . D 4 HOH A 24 624 40 HOH HOH . D 4 HOH A 25 625 8 HOH HOH . D 4 HOH A 26 626 105 HOH HOH . D 4 HOH A 27 627 116 HOH HOH . D 4 HOH A 28 628 20 HOH HOH . D 4 HOH A 29 629 54 HOH HOH . D 4 HOH A 30 630 21 HOH HOH . D 4 HOH A 31 631 6 HOH HOH . D 4 HOH A 32 632 50 HOH HOH . D 4 HOH A 33 633 35 HOH HOH . D 4 HOH A 34 634 132 HOH HOH . D 4 HOH A 35 635 152 HOH HOH . D 4 HOH A 36 636 58 HOH HOH . D 4 HOH A 37 637 126 HOH HOH . D 4 HOH A 38 638 154 HOH HOH . D 4 HOH A 39 639 139 HOH HOH . D 4 HOH A 40 640 57 HOH HOH . D 4 HOH A 41 641 120 HOH HOH . D 4 HOH A 42 642 142 HOH HOH . D 4 HOH A 43 643 146 HOH HOH . D 4 HOH A 44 644 16 HOH HOH . D 4 HOH A 45 645 117 HOH HOH . D 4 HOH A 46 646 124 HOH HOH . D 4 HOH A 47 647 138 HOH HOH . D 4 HOH A 48 648 111 HOH HOH . D 4 HOH A 49 649 144 HOH HOH . D 4 HOH A 50 650 62 HOH HOH . D 4 HOH A 51 651 102 HOH HOH . D 4 HOH A 52 652 95 HOH HOH . D 4 HOH A 53 653 69 HOH HOH . D 4 HOH A 54 654 1 HOH HOH . D 4 HOH A 55 655 3 HOH HOH . D 4 HOH A 56 656 4 HOH HOH . D 4 HOH A 57 657 7 HOH HOH . D 4 HOH A 58 658 9 HOH HOH . D 4 HOH A 59 659 10 HOH HOH . D 4 HOH A 60 660 11 HOH HOH . D 4 HOH A 61 661 12 HOH HOH . D 4 HOH A 62 662 14 HOH HOH . D 4 HOH A 63 663 17 HOH HOH . D 4 HOH A 64 664 18 HOH HOH . D 4 HOH A 65 665 19 HOH HOH . D 4 HOH A 66 666 22 HOH HOH . D 4 HOH A 67 667 23 HOH HOH . D 4 HOH A 68 668 24 HOH HOH . D 4 HOH A 69 669 25 HOH HOH . D 4 HOH A 70 670 26 HOH HOH . D 4 HOH A 71 671 27 HOH HOH . D 4 HOH A 72 672 29 HOH HOH . D 4 HOH A 73 673 30 HOH HOH . D 4 HOH A 74 674 32 HOH HOH . D 4 HOH A 75 675 34 HOH HOH . D 4 HOH A 76 676 36 HOH HOH . D 4 HOH A 77 677 37 HOH HOH . D 4 HOH A 78 678 38 HOH HOH . D 4 HOH A 79 679 39 HOH HOH . D 4 HOH A 80 680 41 HOH HOH . D 4 HOH A 81 681 42 HOH HOH . D 4 HOH A 82 682 43 HOH HOH . D 4 HOH A 83 683 44 HOH HOH . D 4 HOH A 84 684 47 HOH HOH . D 4 HOH A 85 685 48 HOH HOH . D 4 HOH A 86 686 49 HOH HOH . D 4 HOH A 87 687 51 HOH HOH . D 4 HOH A 88 688 52 HOH HOH . D 4 HOH A 89 689 55 HOH HOH . D 4 HOH A 90 690 56 HOH HOH . D 4 HOH A 91 691 59 HOH HOH . D 4 HOH A 92 692 60 HOH HOH . D 4 HOH A 93 693 61 HOH HOH . D 4 HOH A 94 694 65 HOH HOH . D 4 HOH A 95 695 66 HOH HOH . D 4 HOH A 96 696 68 HOH HOH . D 4 HOH A 97 697 73 HOH HOH . D 4 HOH A 98 698 74 HOH HOH . D 4 HOH A 99 699 75 HOH HOH . D 4 HOH A 100 700 76 HOH HOH . D 4 HOH A 101 701 77 HOH HOH . D 4 HOH A 102 702 79 HOH HOH . D 4 HOH A 103 703 80 HOH HOH . D 4 HOH A 104 704 82 HOH HOH . D 4 HOH A 105 705 83 HOH HOH . D 4 HOH A 106 706 84 HOH HOH . D 4 HOH A 107 707 85 HOH HOH . D 4 HOH A 108 708 86 HOH HOH . D 4 HOH A 109 709 87 HOH HOH . D 4 HOH A 110 710 88 HOH HOH . D 4 HOH A 111 711 89 HOH HOH . D 4 HOH A 112 712 90 HOH HOH . D 4 HOH A 113 713 91 HOH HOH . D 4 HOH A 114 714 92 HOH HOH . D 4 HOH A 115 715 94 HOH HOH . D 4 HOH A 116 716 96 HOH HOH . D 4 HOH A 117 717 97 HOH HOH . D 4 HOH A 118 718 100 HOH HOH . D 4 HOH A 119 719 101 HOH HOH . D 4 HOH A 120 720 103 HOH HOH . D 4 HOH A 121 721 104 HOH HOH . D 4 HOH A 122 722 106 HOH HOH . D 4 HOH A 123 723 107 HOH HOH . D 4 HOH A 124 724 108 HOH HOH . D 4 HOH A 125 725 110 HOH HOH . D 4 HOH A 126 726 118 HOH HOH . D 4 HOH A 127 727 121 HOH HOH . D 4 HOH A 128 728 122 HOH HOH . D 4 HOH A 129 729 123 HOH HOH . D 4 HOH A 130 730 127 HOH HOH . D 4 HOH A 131 731 130 HOH HOH . D 4 HOH A 132 732 131 HOH HOH . D 4 HOH A 133 733 135 HOH HOH . D 4 HOH A 134 734 136 HOH HOH . D 4 HOH A 135 735 137 HOH HOH . D 4 HOH A 136 736 140 HOH HOH . D 4 HOH A 137 737 141 HOH HOH . D 4 HOH A 138 738 143 HOH HOH . D 4 HOH A 139 739 145 HOH HOH . D 4 HOH A 140 740 147 HOH HOH . D 4 HOH A 141 741 148 HOH HOH . D 4 HOH A 142 742 149 HOH HOH . D 4 HOH A 143 743 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CYS . A . C 3 -16.654 -1.557 -49.59 0.7 26.59 ? N CYS 502 A 1 HETATM 2 N N CYS . B . C 3 -15.934 -1.689 -48.917 0.3 42.32 ? N CYS 502 A 1 HETATM 3 C CA CYS . A . C 3 -15.768 -1.296 -50.737 0.7 28.09 ? CA CYS 502 A 1 HETATM 4 C CA CYS . B . C 3 -15.592 -1.507 -50.321 0.3 36.75 ? CA CYS 502 A 1 HETATM 5 C C CYS . A . C 3 -14.297 -1.222 -50.35 0.7 34.76 ? C CYS 502 A 1 HETATM 6 C C CYS . B . C 3 -14.079 -1.438 -50.48 0.3 37.61 ? C CYS 502 A 1 HETATM 7 O O CYS . A . C 3 -13.41 -1.428 -51.192 0.7 28.29 ? O CYS 502 A 1 HETATM 8 O O CYS . B . C 3 -13.486 -2.124 -51.311 0.3 38.86 ? O CYS 502 A 1 HETATM 9 C CB CYS . A . C 3 -16.185 -0.005 -51.412 0.7 28.86 ? CB CYS 502 A 1 HETATM 10 C CB CYS . B . C 3 -16.243 -0.239 -50.875 0.3 31.91 ? CB CYS 502 A 1 HETATM 11 S SG CYS . A . C 3 -17.967 0.045 -51.684 0.7 30.14 ? SG CYS 502 A 1 HETATM 12 S SG CYS . B . C 3 -17.734 0.27 -50.006 0.3 25.49 ? SG CYS 502 A 1 HETATM 13 O OXT CYS . A . C 3 -13.979 -0.97 -49.186 0.7 31.73 ? OXT CYS 502 A 1 HETATM 14 O OXT CYS . B . C 3 -13.411 -0.7 -49.759 0.3 39.77 ? OXT CYS 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #