data_4XFA # _model_server_result.job_id kLxp4vEpYWhqSCWRKo1W0g _model_server_result.datetime_utc '2024-10-12 15:31:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xfa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4XFA # _exptl.entry_id 4XFA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 135.185 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-AMINO-4-MERCAPTO-BUTYRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XFA _cell.length_a 57.6 _cell.length_b 57.6 _cell.length_c 122.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XFA _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc2 A NE2 HIS 88 A HIS 88 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc3 A NE2 HIS 140 A HIS 140 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc4 B FE FE . A FE 501 1_555 C SD HCS . A HCS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? # _chem_comp.formula 'C4 H9 N O2 S' _chem_comp.formula_weight 135.185 _chem_comp.id HCS _chem_comp.mon_nstd_flag . _chem_comp.name '2-AMINO-4-MERCAPTO-BUTYRIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms L-Homocysteine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HCS sing 129 n n N H HCS sing 130 n n N H2 HCS sing 131 n n CA CB HCS sing 132 n n CA C HCS sing 133 n n CA HA HCS sing 134 n n CB CG HCS sing 135 n n CB HB2 HCS sing 136 n n CB HB3 HCS sing 137 n n CG SD HCS sing 138 n n CG HG2 HCS sing 139 n n CG HG3 HCS sing 140 n n SD HD HCS sing 141 n n C OXT HCS sing 142 n n C O HCS doub 143 n n OXT HXT HCS sing 144 n n # _atom_sites.entry_id 4XFA _atom_sites.fract_transf_matrix[1][1] 0.017361 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 501 501 FE FE . C 3 HCS A 1 502 502 HCS HCS . D 4 HOH A 1 601 148 HOH HOH . D 4 HOH A 2 602 131 HOH HOH . D 4 HOH A 3 603 12 HOH HOH . D 4 HOH A 4 604 39 HOH HOH . D 4 HOH A 5 605 19 HOH HOH . D 4 HOH A 6 606 28 HOH HOH . D 4 HOH A 7 607 75 HOH HOH . D 4 HOH A 8 608 13 HOH HOH . D 4 HOH A 9 609 70 HOH HOH . D 4 HOH A 10 610 26 HOH HOH . D 4 HOH A 11 611 43 HOH HOH . D 4 HOH A 12 612 160 HOH HOH . D 4 HOH A 13 613 96 HOH HOH . D 4 HOH A 14 614 35 HOH HOH . D 4 HOH A 15 615 46 HOH HOH . D 4 HOH A 16 616 89 HOH HOH . D 4 HOH A 17 617 5 HOH HOH . D 4 HOH A 18 618 54 HOH HOH . D 4 HOH A 19 619 79 HOH HOH . D 4 HOH A 20 620 83 HOH HOH . D 4 HOH A 21 621 108 HOH HOH . D 4 HOH A 22 622 42 HOH HOH . D 4 HOH A 23 623 22 HOH HOH . D 4 HOH A 24 624 53 HOH HOH . D 4 HOH A 25 625 2 HOH HOH . D 4 HOH A 26 626 50 HOH HOH . D 4 HOH A 27 627 189 HOH HOH . D 4 HOH A 28 628 112 HOH HOH . D 4 HOH A 29 629 181 HOH HOH . D 4 HOH A 30 630 6 HOH HOH . D 4 HOH A 31 631 55 HOH HOH . D 4 HOH A 32 632 162 HOH HOH . D 4 HOH A 33 633 18 HOH HOH . D 4 HOH A 34 634 149 HOH HOH . D 4 HOH A 35 635 8 HOH HOH . D 4 HOH A 36 636 117 HOH HOH . D 4 HOH A 37 637 68 HOH HOH . D 4 HOH A 38 638 65 HOH HOH . D 4 HOH A 39 639 31 HOH HOH . D 4 HOH A 40 640 164 HOH HOH . D 4 HOH A 41 641 155 HOH HOH . D 4 HOH A 42 642 59 HOH HOH . D 4 HOH A 43 643 168 HOH HOH . D 4 HOH A 44 644 150 HOH HOH . D 4 HOH A 45 645 174 HOH HOH . D 4 HOH A 46 646 115 HOH HOH . D 4 HOH A 47 647 173 HOH HOH . D 4 HOH A 48 648 61 HOH HOH . D 4 HOH A 49 649 82 HOH HOH . D 4 HOH A 50 650 183 HOH HOH . D 4 HOH A 51 651 71 HOH HOH . D 4 HOH A 52 652 94 HOH HOH . D 4 HOH A 53 653 130 HOH HOH . D 4 HOH A 54 654 14 HOH HOH . D 4 HOH A 55 655 157 HOH HOH . D 4 HOH A 56 656 154 HOH HOH . D 4 HOH A 57 657 86 HOH HOH . D 4 HOH A 58 658 111 HOH HOH . D 4 HOH A 59 659 182 HOH HOH . D 4 HOH A 60 660 192 HOH HOH . D 4 HOH A 61 661 66 HOH HOH . D 4 HOH A 62 662 95 HOH HOH . D 4 HOH A 63 663 104 HOH HOH . D 4 HOH A 64 664 77 HOH HOH . D 4 HOH A 65 665 166 HOH HOH . D 4 HOH A 66 666 1 HOH HOH . D 4 HOH A 67 667 3 HOH HOH . D 4 HOH A 68 668 4 HOH HOH . D 4 HOH A 69 669 7 HOH HOH . D 4 HOH A 70 670 9 HOH HOH . D 4 HOH A 71 671 10 HOH HOH . D 4 HOH A 72 672 11 HOH HOH . D 4 HOH A 73 673 15 HOH HOH . D 4 HOH A 74 674 16 HOH HOH . D 4 HOH A 75 675 17 HOH HOH . D 4 HOH A 76 676 20 HOH HOH . D 4 HOH A 77 677 21 HOH HOH . D 4 HOH A 78 678 23 HOH HOH . D 4 HOH A 79 679 24 HOH HOH . D 4 HOH A 80 680 25 HOH HOH . D 4 HOH A 81 681 27 HOH HOH . D 4 HOH A 82 682 29 HOH HOH . D 4 HOH A 83 683 30 HOH HOH . D 4 HOH A 84 684 32 HOH HOH . D 4 HOH A 85 685 33 HOH HOH . D 4 HOH A 86 686 34 HOH HOH . D 4 HOH A 87 687 36 HOH HOH . D 4 HOH A 88 688 37 HOH HOH . D 4 HOH A 89 689 38 HOH HOH . D 4 HOH A 90 690 40 HOH HOH . D 4 HOH A 91 691 44 HOH HOH . D 4 HOH A 92 692 45 HOH HOH . D 4 HOH A 93 693 47 HOH HOH . D 4 HOH A 94 694 48 HOH HOH . D 4 HOH A 95 695 49 HOH HOH . D 4 HOH A 96 696 51 HOH HOH . D 4 HOH A 97 697 52 HOH HOH . D 4 HOH A 98 698 56 HOH HOH . D 4 HOH A 99 699 57 HOH HOH . D 4 HOH A 100 700 58 HOH HOH . D 4 HOH A 101 701 60 HOH HOH . D 4 HOH A 102 702 62 HOH HOH . D 4 HOH A 103 703 63 HOH HOH . D 4 HOH A 104 704 64 HOH HOH . D 4 HOH A 105 705 67 HOH HOH . D 4 HOH A 106 706 69 HOH HOH . D 4 HOH A 107 707 72 HOH HOH . D 4 HOH A 108 708 73 HOH HOH . D 4 HOH A 109 709 74 HOH HOH . D 4 HOH A 110 710 76 HOH HOH . D 4 HOH A 111 711 78 HOH HOH . D 4 HOH A 112 712 81 HOH HOH . D 4 HOH A 113 713 84 HOH HOH . D 4 HOH A 114 714 85 HOH HOH . D 4 HOH A 115 715 87 HOH HOH . D 4 HOH A 116 716 88 HOH HOH . D 4 HOH A 117 717 90 HOH HOH . D 4 HOH A 118 718 91 HOH HOH . D 4 HOH A 119 719 93 HOH HOH . D 4 HOH A 120 720 97 HOH HOH . D 4 HOH A 121 721 98 HOH HOH . D 4 HOH A 122 722 99 HOH HOH . D 4 HOH A 123 723 100 HOH HOH . D 4 HOH A 124 724 101 HOH HOH . D 4 HOH A 125 725 102 HOH HOH . D 4 HOH A 126 726 103 HOH HOH . D 4 HOH A 127 727 105 HOH HOH . D 4 HOH A 128 728 106 HOH HOH . D 4 HOH A 129 729 107 HOH HOH . D 4 HOH A 130 730 109 HOH HOH . D 4 HOH A 131 731 110 HOH HOH . D 4 HOH A 132 732 113 HOH HOH . D 4 HOH A 133 733 114 HOH HOH . D 4 HOH A 134 734 116 HOH HOH . D 4 HOH A 135 735 118 HOH HOH . D 4 HOH A 136 736 119 HOH HOH . D 4 HOH A 137 737 120 HOH HOH . D 4 HOH A 138 738 121 HOH HOH . D 4 HOH A 139 739 122 HOH HOH . D 4 HOH A 140 740 123 HOH HOH . D 4 HOH A 141 741 124 HOH HOH . D 4 HOH A 142 742 125 HOH HOH . D 4 HOH A 143 743 126 HOH HOH . D 4 HOH A 144 744 127 HOH HOH . D 4 HOH A 145 745 128 HOH HOH . D 4 HOH A 146 746 129 HOH HOH . D 4 HOH A 147 747 132 HOH HOH . D 4 HOH A 148 748 133 HOH HOH . D 4 HOH A 149 749 134 HOH HOH . D 4 HOH A 150 750 135 HOH HOH . D 4 HOH A 151 751 136 HOH HOH . D 4 HOH A 152 752 137 HOH HOH . D 4 HOH A 153 753 138 HOH HOH . D 4 HOH A 154 754 139 HOH HOH . D 4 HOH A 155 755 140 HOH HOH . D 4 HOH A 156 756 141 HOH HOH . D 4 HOH A 157 757 144 HOH HOH . D 4 HOH A 158 758 151 HOH HOH . D 4 HOH A 159 759 152 HOH HOH . D 4 HOH A 160 760 156 HOH HOH . D 4 HOH A 161 761 158 HOH HOH . D 4 HOH A 162 762 159 HOH HOH . D 4 HOH A 163 763 161 HOH HOH . D 4 HOH A 164 764 163 HOH HOH . D 4 HOH A 165 765 165 HOH HOH . D 4 HOH A 166 766 167 HOH HOH . D 4 HOH A 167 767 169 HOH HOH . D 4 HOH A 168 768 170 HOH HOH . D 4 HOH A 169 769 175 HOH HOH . D 4 HOH A 170 770 176 HOH HOH . D 4 HOH A 171 771 177 HOH HOH . D 4 HOH A 172 772 178 HOH HOH . D 4 HOH A 173 773 179 HOH HOH . D 4 HOH A 174 774 180 HOH HOH . D 4 HOH A 175 775 184 HOH HOH . D 4 HOH A 176 776 185 HOH HOH . D 4 HOH A 177 777 186 HOH HOH . D 4 HOH A 178 778 187 HOH HOH . D 4 HOH A 179 779 190 HOH HOH . D 4 HOH A 180 780 191 HOH HOH . D 4 HOH A 181 781 193 HOH HOH . D 4 HOH A 182 782 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HCS . . . C 3 -15.87 -1.772 -48.701 1 27.83 ? N HCS 502 A 1 HETATM 2 C CA HCS . . . C 3 -15.208 -2.113 -49.922 1 31.33 ? CA HCS 502 A 1 HETATM 3 C CB HCS . . . C 3 -15.888 -1.593 -51.195 1 37.18 ? CB HCS 502 A 1 HETATM 4 C CG HCS . . . C 3 -16.465 -0.203 -51.147 1 30.98 ? CG HCS 502 A 1 HETATM 5 S SD HCS . . . C 3 -17.842 0.083 -50.033 1 21.64 ? SD HCS 502 A 1 HETATM 6 C C HCS . . . C 3 -13.794 -1.603 -49.785 1 31.88 ? C HCS 502 A 1 HETATM 7 O OXT HCS . . . C 3 -13.296 -1.078 -48.789 1 30.48 ? OXT HCS 502 A 1 HETATM 8 O O HCS . . . C 3 -13.035 -1.747 -50.892 1 26.06 ? O HCS 502 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #