data_4XFX # _model_server_result.job_id 5xFIFRa7JTKIY8R2BoAVrg _model_server_result.datetime_utc '2024-11-25 21:39:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xfx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":307}' # _entry.id 4XFX # _exptl.entry_id 4XFX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XFX _cell.length_a 92.328 _cell.length_b 92.328 _cell.length_c 57.34 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XFX _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 198 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 198 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 218 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 218 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.038 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XFX _atom_sites.fract_transf_matrix[1][1] 0.010831 _atom_sites.fract_transf_matrix[1][2] 0.006253 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 301 301 IOD IOD . C 2 IOD A 1 302 302 IOD IOD . D 2 IOD A 1 303 303 IOD IOD . E 2 IOD A 1 304 304 IOD IOD . F 2 IOD A 1 305 305 IOD IOD . G 2 IOD A 1 306 306 IOD IOD . H 2 IOD A 1 307 307 IOD IOD . I 3 CL A 1 308 308 CL CL . J 3 CL A 1 309 309 CL CL . K 4 HOH A 1 401 424 HOH HOH . K 4 HOH A 2 402 418 HOH HOH . K 4 HOH A 3 403 417 HOH HOH . K 4 HOH A 4 404 473 HOH HOH . K 4 HOH A 5 405 407 HOH HOH . K 4 HOH A 6 406 409 HOH HOH . K 4 HOH A 7 407 404 HOH HOH . K 4 HOH A 8 408 415 HOH HOH . K 4 HOH A 9 409 447 HOH HOH . K 4 HOH A 10 410 401 HOH HOH . K 4 HOH A 11 411 403 HOH HOH . K 4 HOH A 12 412 422 HOH HOH . K 4 HOH A 13 413 433 HOH HOH . K 4 HOH A 14 414 460 HOH HOH . K 4 HOH A 15 415 410 HOH HOH . K 4 HOH A 16 416 419 HOH HOH . K 4 HOH A 17 417 465 HOH HOH . K 4 HOH A 18 418 464 HOH HOH . K 4 HOH A 19 419 456 HOH HOH . K 4 HOH A 20 420 428 HOH HOH . K 4 HOH A 21 421 437 HOH HOH . K 4 HOH A 22 422 429 HOH HOH . K 4 HOH A 23 423 411 HOH HOH . K 4 HOH A 24 424 406 HOH HOH . K 4 HOH A 25 425 459 HOH HOH . K 4 HOH A 26 426 435 HOH HOH . K 4 HOH A 27 427 421 HOH HOH . K 4 HOH A 28 428 440 HOH HOH . K 4 HOH A 29 429 458 HOH HOH . K 4 HOH A 30 430 438 HOH HOH . K 4 HOH A 31 431 402 HOH HOH . K 4 HOH A 32 432 405 HOH HOH . K 4 HOH A 33 433 408 HOH HOH . K 4 HOH A 34 434 412 HOH HOH . K 4 HOH A 35 435 413 HOH HOH . K 4 HOH A 36 436 414 HOH HOH . K 4 HOH A 37 437 416 HOH HOH . K 4 HOH A 38 438 420 HOH HOH . K 4 HOH A 39 439 423 HOH HOH . K 4 HOH A 40 440 425 HOH HOH . K 4 HOH A 41 441 426 HOH HOH . K 4 HOH A 42 442 427 HOH HOH . K 4 HOH A 43 443 430 HOH HOH . K 4 HOH A 44 444 431 HOH HOH . K 4 HOH A 45 445 432 HOH HOH . K 4 HOH A 46 446 434 HOH HOH . K 4 HOH A 47 447 436 HOH HOH . K 4 HOH A 48 448 439 HOH HOH . K 4 HOH A 49 449 441 HOH HOH . K 4 HOH A 50 450 442 HOH HOH . K 4 HOH A 51 451 443 HOH HOH . K 4 HOH A 52 452 444 HOH HOH . K 4 HOH A 53 453 445 HOH HOH . K 4 HOH A 54 454 446 HOH HOH . K 4 HOH A 55 455 448 HOH HOH . K 4 HOH A 56 456 449 HOH HOH . K 4 HOH A 57 457 450 HOH HOH . K 4 HOH A 58 458 451 HOH HOH . K 4 HOH A 59 459 452 HOH HOH . K 4 HOH A 60 460 453 HOH HOH . K 4 HOH A 61 461 454 HOH HOH . K 4 HOH A 62 462 455 HOH HOH . K 4 HOH A 63 463 457 HOH HOH . K 4 HOH A 64 464 461 HOH HOH . K 4 HOH A 65 465 462 HOH HOH . K 4 HOH A 66 466 463 HOH HOH . K 4 HOH A 67 467 466 HOH HOH . K 4 HOH A 68 468 467 HOH HOH . K 4 HOH A 69 469 468 HOH HOH . K 4 HOH A 70 470 469 HOH HOH . K 4 HOH A 71 471 470 HOH HOH . K 4 HOH A 72 472 471 HOH HOH . K 4 HOH A 73 473 472 HOH HOH . K 4 HOH A 74 474 474 HOH HOH . K 4 HOH A 75 475 475 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.068 _atom_site.Cartn_y -4.744 _atom_site.Cartn_z 4.719 _atom_site.occupancy 0.67 _atom_site.B_iso_or_equiv 93.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 307 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #