data_4XGQ # _model_server_result.job_id -ymW-kwnFjPZ8OkJS0uxrA _model_server_result.datetime_utc '2024-11-13 21:02:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xgq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":201}' # _entry.id 4XGQ # _exptl.entry_id 4XGQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XGQ _cell.length_a 96.381 _cell.length_b 96.381 _cell.length_c 232.788 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XGQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,K,L,O,P 1 1 C,D,G,H,J,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 5 A ASP 4 1_555 I MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc2 A OD1 ASP 100 A ASP 99 1_555 I MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? metalc ? metalc3 C OE1 GLU 41 E GLU 40 1_555 J MG MG . E MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc4 C OE2 GLU 41 E GLU 40 1_555 J MG MG . E MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc5 C OD1 ASP 100 E ASP 99 1_555 J MG MG . E MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc6 J MG MG . E MG 201 1_555 M O HOH . E HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc7 E OD1 ASP 5 C ASP 4 1_555 K MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc8 E OD1 ASP 100 C ASP 99 1_555 K MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XGQ _atom_sites.fract_transf_matrix[1][1] 0.010375 _atom_sites.fract_transf_matrix[1][2] 0.00599 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 MG A 1 201 201 MG MG . J 3 MG E 1 201 201 MG MG . K 3 MG C 1 201 201 MG MG . L 4 HOH A 1 301 47 HOH HOH . L 4 HOH A 2 302 56 HOH HOH . L 4 HOH A 3 303 29 HOH HOH . L 4 HOH A 4 304 26 HOH HOH . L 4 HOH A 5 305 100 HOH HOH . L 4 HOH A 6 306 98 HOH HOH . L 4 HOH A 7 307 3 HOH HOH . L 4 HOH A 8 308 65 HOH HOH . L 4 HOH A 9 309 61 HOH HOH . L 4 HOH A 10 310 23 HOH HOH . L 4 HOH A 11 311 15 HOH HOH . L 4 HOH A 12 312 12 HOH HOH . L 4 HOH A 13 313 9 HOH HOH . L 4 HOH A 14 314 58 HOH HOH . L 4 HOH A 15 315 62 HOH HOH . L 4 HOH A 16 316 94 HOH HOH . L 4 HOH A 17 317 5 HOH HOH . L 4 HOH A 18 318 43 HOH HOH . L 4 HOH A 19 319 55 HOH HOH . L 4 HOH A 20 320 72 HOH HOH . L 4 HOH A 21 321 83 HOH HOH . L 4 HOH A 22 322 106 HOH HOH . L 4 HOH A 23 323 101 HOH HOH . L 4 HOH A 24 324 85 HOH HOH . L 4 HOH A 25 325 108 HOH HOH . L 4 HOH A 26 326 67 HOH HOH . M 4 HOH E 1 301 51 HOH HOH . M 4 HOH E 2 302 77 HOH HOH . M 4 HOH E 3 303 60 HOH HOH . M 4 HOH E 4 304 91 HOH HOH . M 4 HOH E 5 305 1 HOH HOH . M 4 HOH E 6 306 13 HOH HOH . M 4 HOH E 7 307 80 HOH HOH . M 4 HOH E 8 308 20 HOH HOH . M 4 HOH E 9 309 87 HOH HOH . M 4 HOH E 10 310 46 HOH HOH . M 4 HOH E 11 311 10 HOH HOH . M 4 HOH E 12 312 44 HOH HOH . M 4 HOH E 13 313 57 HOH HOH . M 4 HOH E 14 314 37 HOH HOH . M 4 HOH E 15 315 81 HOH HOH . M 4 HOH E 16 316 88 HOH HOH . M 4 HOH E 17 317 64 HOH HOH . M 4 HOH E 18 318 38 HOH HOH . M 4 HOH E 19 319 22 HOH HOH . M 4 HOH E 20 320 33 HOH HOH . M 4 HOH E 21 321 27 HOH HOH . M 4 HOH E 22 322 103 HOH HOH . M 4 HOH E 23 323 76 HOH HOH . M 4 HOH E 24 324 95 HOH HOH . M 4 HOH E 25 325 97 HOH HOH . M 4 HOH E 26 326 70 HOH HOH . M 4 HOH E 27 327 39 HOH HOH . M 4 HOH E 28 328 8 HOH HOH . M 4 HOH E 29 329 110 HOH HOH . N 4 HOH F 1 101 11 HOH HOH . N 4 HOH F 2 102 50 HOH HOH . N 4 HOH F 3 103 59 HOH HOH . O 4 HOH C 1 301 40 HOH HOH . O 4 HOH C 2 302 24 HOH HOH . O 4 HOH C 3 303 17 HOH HOH . O 4 HOH C 4 304 4 HOH HOH . O 4 HOH C 5 305 7 HOH HOH . O 4 HOH C 6 306 31 HOH HOH . O 4 HOH C 7 307 41 HOH HOH . O 4 HOH C 8 308 21 HOH HOH . O 4 HOH C 9 309 30 HOH HOH . O 4 HOH C 10 310 19 HOH HOH . O 4 HOH C 11 311 68 HOH HOH . O 4 HOH C 12 312 25 HOH HOH . O 4 HOH C 13 313 36 HOH HOH . O 4 HOH C 14 314 42 HOH HOH . O 4 HOH C 15 315 89 HOH HOH . O 4 HOH C 16 316 69 HOH HOH . O 4 HOH C 17 317 107 HOH HOH . O 4 HOH C 18 318 111 HOH HOH . O 4 HOH C 19 319 52 HOH HOH . O 4 HOH C 20 320 73 HOH HOH . O 4 HOH C 21 321 66 HOH HOH . P 4 HOH D 1 101 102 HOH HOH . P 4 HOH D 2 102 84 HOH HOH . Q 4 HOH G 1 201 18 HOH HOH . Q 4 HOH G 2 202 78 HOH HOH . Q 4 HOH G 3 203 82 HOH HOH . Q 4 HOH G 4 204 86 HOH HOH . Q 4 HOH G 5 205 90 HOH HOH . Q 4 HOH G 6 206 92 HOH HOH . Q 4 HOH G 7 207 14 HOH HOH . Q 4 HOH G 8 208 63 HOH HOH . Q 4 HOH G 9 209 2 HOH HOH . Q 4 HOH G 10 210 35 HOH HOH . Q 4 HOH G 11 211 6 HOH HOH . Q 4 HOH G 12 212 49 HOH HOH . Q 4 HOH G 13 213 54 HOH HOH . Q 4 HOH G 14 214 104 HOH HOH . Q 4 HOH G 15 215 32 HOH HOH . Q 4 HOH G 16 216 79 HOH HOH . Q 4 HOH G 17 217 48 HOH HOH . Q 4 HOH G 18 218 71 HOH HOH . R 4 HOH H 1 101 99 HOH HOH . R 4 HOH H 2 102 96 HOH HOH . R 4 HOH H 3 103 105 HOH HOH . R 4 HOH H 4 104 53 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -33.829 _atom_site.Cartn_y -58.999 _atom_site.Cartn_z -22.615 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #