data_4XGR
#
_model_server_result.job_id            4xk58B322i8nzJVELDPWLQ 
_model_server_result.datetime_utc      '2024-11-29 03:56:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xgr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":201}' 
#
_entry.id    4XGR 
#
_exptl.entry_id    4XGR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4XGR 
_cell.length_a            96.31 
_cell.length_b            96.31 
_cell.length_c            233.033 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XGR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,H,I,J,K,N,O,R 1 1 
B,C,F,G,L,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 1 A MSE 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C MSE 2 A MSE 1 1_555 A N VAL 3 A VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale3 A C ALA 11 A ALA 10 1_555 A N MSE 12 A MSE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale4 A C MSE 12 A MSE 11 1_555 A N LEU 13 A LEU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale5 A C LEU 33 A LEU 32 1_555 A N MSE 34 A MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale6 A C MSE 34 A MSE 33 1_555 A N SER 35 A SER 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale7 B C MSE 1 G MSE 0 1_555 B N MSE 2 G MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale8 B C MSE 2 G MSE 1 1_555 B N VAL 3 G VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 B C ALA 11 G ALA 10 1_555 B N MSE 12 G MSE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 B C MSE 12 G MSE 11 1_555 B N LEU 13 G LEU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale11 B C LEU 33 G LEU 32 1_555 B N MSE 34 G MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale12 B C MSE 34 G MSE 33 1_555 B N SER 35 G SER 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale13 C C MSE 1 E MSE 0 1_555 C N MSE 2 E MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale14 C C MSE 2 E MSE 1 1_555 C N VAL 3 E VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale15 C C ALA 11 E ALA 10 1_555 C N MSE 12 E MSE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale16 C C MSE 12 E MSE 11 1_555 C N LEU 13 E LEU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale17 C C LEU 33 E LEU 32 1_555 C N MSE 34 E MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale18 C C MSE 34 E MSE 33 1_555 C N SER 35 E SER 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale19 D C MSE 1 C MSE 0 1_555 D N MSE 2 C MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale20 D C MSE 2 C MSE 1 1_555 D N VAL 3 C VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.369 ? 
covale ? covale21 D C ALA 11 C ALA 10 1_555 D N MSE 12 C MSE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale22 D C MSE 12 C MSE 11 1_555 D N LEU 13 C LEU 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? 
covale ? covale23 D C LEU 33 C LEU 32 1_555 D N MSE 34 C MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale24 D C MSE 34 C MSE 33 1_555 D N SER 35 C SER 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
metalc ? metalc1 A OD1 ASP 5 A ASP 4 1_555 I MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? 
metalc ? metalc2 A OD1 ASP 100 A ASP 99 1_555 I MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? 
metalc ? metalc3 D OD1 ASP 5 C ASP 4 1_555 J MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? 
metalc ? metalc4 D OD2 ASP 5 C ASP 4 1_555 J MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? 
metalc ? metalc5 D OD1 ASP 100 C ASP 99 1_555 J MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc6 J MG MG . C MG 201 1_555 N O HOH . C HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4XGR 
_atom_sites.fract_transf_matrix[1][1]    0.010383 
_atom_sites.fract_transf_matrix[1][2]    0.005995 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011989 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004291 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 MG A 1 201 201 MG MG . 
J 3 MG C 1 201 201 MG MG . 
K 4 HOH A 1 301 23 HOH HOH . 
K 4 HOH A 2 302 35 HOH HOH . 
K 4 HOH A 3 303 7 HOH HOH . 
K 4 HOH A 4 304 39 HOH HOH . 
K 4 HOH A 5 305 1 HOH HOH . 
K 4 HOH A 6 306 5 HOH HOH . 
K 4 HOH A 7 307 18 HOH HOH . 
K 4 HOH A 8 308 40 HOH HOH . 
K 4 HOH A 9 309 51 HOH HOH . 
K 4 HOH A 10 310 16 HOH HOH . 
K 4 HOH A 11 311 32 HOH HOH . 
K 4 HOH A 12 312 44 HOH HOH . 
L 4 HOH G 1 201 27 HOH HOH . 
L 4 HOH G 2 202 2 HOH HOH . 
L 4 HOH G 3 203 3 HOH HOH . 
L 4 HOH G 4 204 28 HOH HOH . 
L 4 HOH G 5 205 36 HOH HOH . 
L 4 HOH G 6 206 15 HOH HOH . 
L 4 HOH G 7 207 8 HOH HOH . 
L 4 HOH G 8 208 13 HOH HOH . 
L 4 HOH G 9 209 50 HOH HOH . 
L 4 HOH G 10 210 52 HOH HOH . 
L 4 HOH G 11 211 37 HOH HOH . 
L 4 HOH G 12 212 46 HOH HOH . 
L 4 HOH G 13 213 53 HOH HOH . 
L 4 HOH G 14 214 47 HOH HOH . 
M 4 HOH E 1 201 6 HOH HOH . 
M 4 HOH E 2 202 11 HOH HOH . 
M 4 HOH E 3 203 14 HOH HOH . 
M 4 HOH E 4 204 43 HOH HOH . 
M 4 HOH E 5 205 29 HOH HOH . 
M 4 HOH E 6 206 4 HOH HOH . 
M 4 HOH E 7 207 17 HOH HOH . 
M 4 HOH E 8 208 9 HOH HOH . 
M 4 HOH E 9 209 22 HOH HOH . 
M 4 HOH E 10 210 26 HOH HOH . 
M 4 HOH E 11 211 42 HOH HOH . 
M 4 HOH E 12 212 48 HOH HOH . 
N 4 HOH C 1 301 24 HOH HOH . 
N 4 HOH C 2 302 30 HOH HOH . 
N 4 HOH C 3 303 38 HOH HOH . 
N 4 HOH C 4 304 20 HOH HOH . 
N 4 HOH C 5 305 49 HOH HOH . 
N 4 HOH C 6 306 31 HOH HOH . 
N 4 HOH C 7 307 25 HOH HOH . 
N 4 HOH C 8 308 34 HOH HOH . 
N 4 HOH C 9 309 45 HOH HOH . 
N 4 HOH C 10 310 12 HOH HOH . 
N 4 HOH C 11 311 19 HOH HOH . 
O 4 HOH B 1 101 21 HOH HOH . 
O 4 HOH B 2 102 54 HOH HOH . 
P 4 HOH H 1 101 33 HOH HOH . 
P 4 HOH H 2 102 41 HOH HOH . 
Q 4 HOH F 1 101 10 HOH HOH . 
R 4 HOH D 1 101 55 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               71.142 
_atom_site.Cartn_y               14.742 
_atom_site.Cartn_z               92.998 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        42.88 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#