data_4XHC # _model_server_result.job_id uZ6TCShtMdoI1Ac6hbQZvw _model_server_result.datetime_utc '2024-10-19 19:46:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xhc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":900}' # _entry.id 4XHC # _exptl.entry_id 4XHC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description alpha-L-rhamnopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XHC _cell.length_a 148.43 _cell.length_b 148.43 _cell.length_c 202.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XHC _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C6 H12 O5' _chem_comp.formula_weight 164.156 _chem_comp.id RAM _chem_comp.mon_nstd_flag . _chem_comp.name alpha-L-rhamnopyranose _chem_comp.type 'l-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-L-rhamnose;6-deoxy-alpha-L-mannopyranose;L-rhamnose;rhamnose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 RAM sing 277 n n C1 O1 RAM sing 278 n n C1 O5 RAM sing 279 n n C1 H1 RAM sing 280 n n C2 C3 RAM sing 281 n n C2 O2 RAM sing 282 n n C2 H2 RAM sing 283 n n C3 C4 RAM sing 284 n n C3 O3 RAM sing 285 n n C3 H3 RAM sing 286 n n C4 C5 RAM sing 287 n n C4 O4 RAM sing 288 n n C4 H4 RAM sing 289 n n C5 C6 RAM sing 290 n n C5 O5 RAM sing 291 n n C5 H5 RAM sing 292 n n C6 H61 RAM sing 293 n n C6 H62 RAM sing 294 n n C6 H63 RAM sing 295 n n O1 HO1 RAM sing 296 n n O2 HO2 RAM sing 297 n n O3 HO3 RAM sing 298 n n O4 HO4 RAM sing 299 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version RAM LRhapa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 RAM a-L-rhamnopyranose 'COMMON NAME' GMML 1 RAM a-L-Rhap 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 RAM Rha 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4XHC _atom_sites.fract_transf_matrix[1][1] 0.006737 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006737 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RAM A 1 900 900 RAM RAM . D 3 SO4 A 1 901 901 SO4 SO4 . E 3 SO4 A 1 902 902 SO4 SO4 . F 2 RAM B 1 900 900 RAM RAM . G 3 SO4 B 1 901 901 SO4 SO4 . H 3 SO4 B 1 902 902 SO4 SO4 . I 4 HOH A 1 1001 40 HOH HOH . I 4 HOH A 2 1002 35 HOH HOH . I 4 HOH A 3 1003 6 HOH HOH . I 4 HOH A 4 1004 36 HOH HOH . I 4 HOH A 5 1005 4 HOH HOH . I 4 HOH A 6 1006 5 HOH HOH . I 4 HOH A 7 1007 14 HOH HOH . I 4 HOH A 8 1008 45 HOH HOH . I 4 HOH A 9 1009 33 HOH HOH . I 4 HOH A 10 1010 42 HOH HOH . I 4 HOH A 11 1011 12 HOH HOH . I 4 HOH A 12 1012 31 HOH HOH . I 4 HOH A 13 1013 34 HOH HOH . I 4 HOH A 14 1014 20 HOH HOH . I 4 HOH A 15 1015 15 HOH HOH . I 4 HOH A 16 1016 44 HOH HOH . I 4 HOH A 17 1017 25 HOH HOH . I 4 HOH A 18 1018 32 HOH HOH . I 4 HOH A 19 1019 23 HOH HOH . I 4 HOH A 20 1020 19 HOH HOH . I 4 HOH A 21 1021 11 HOH HOH . I 4 HOH A 22 1022 41 HOH HOH . I 4 HOH A 23 1023 13 HOH HOH . J 4 HOH B 1 1001 30 HOH HOH . J 4 HOH B 2 1002 37 HOH HOH . J 4 HOH B 3 1003 43 HOH HOH . J 4 HOH B 4 1004 16 HOH HOH . J 4 HOH B 5 1005 3 HOH HOH . J 4 HOH B 6 1006 38 HOH HOH . J 4 HOH B 7 1007 2 HOH HOH . J 4 HOH B 8 1008 17 HOH HOH . J 4 HOH B 9 1009 29 HOH HOH . J 4 HOH B 10 1010 1 HOH HOH . J 4 HOH B 11 1011 21 HOH HOH . J 4 HOH B 12 1012 7 HOH HOH . J 4 HOH B 13 1013 26 HOH HOH . J 4 HOH B 14 1014 39 HOH HOH . J 4 HOH B 15 1015 22 HOH HOH . J 4 HOH B 16 1016 9 HOH HOH . J 4 HOH B 17 1017 28 HOH HOH . J 4 HOH B 18 1018 10 HOH HOH . J 4 HOH B 19 1019 27 HOH HOH . J 4 HOH B 20 1020 24 HOH HOH . J 4 HOH B 21 1021 18 HOH HOH . J 4 HOH B 22 1022 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RAM . . . F 2 36.73 76.343 57.219 1 41.52 ? C1 RAM 900 B 1 HETATM 2 C C2 RAM . . . F 2 35.954 75.631 58.307 1 42.68 ? C2 RAM 900 B 1 HETATM 3 C C3 RAM . . . F 2 36.467 76.033 59.679 1 43.34 ? C3 RAM 900 B 1 HETATM 4 C C4 RAM . . . F 2 36.679 77.543 59.733 1 43.34 ? C4 RAM 900 B 1 HETATM 5 C C5 RAM . . . F 2 37.773 77.921 58.748 1 43.2 ? C5 RAM 900 B 1 HETATM 6 C C6 RAM . . . F 2 37.514 79.222 58.034 1 43.66 ? C6 RAM 900 B 1 HETATM 7 O O1 RAM . . . F 2 37.052 75.453 56.235 1 41.81 ? O1 RAM 900 B 1 HETATM 8 O O2 RAM . . . F 2 34.595 76.028 58.175 1 44.15 ? O2 RAM 900 B 1 HETATM 9 O O3 RAM . . . F 2 35.526 75.634 60.669 1 45.45 ? O3 RAM 900 B 1 HETATM 10 O O4 RAM . . . F 2 37.058 77.976 61.035 1 42.13 ? O4 RAM 900 B 1 HETATM 11 O O5 RAM . . . F 2 37.925 76.887 57.751 1 43.38 ? O5 RAM 900 B 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 123 _model_server_stats.query_time_ms 479 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #