data_4XHV # _model_server_result.job_id Sc1BFRTaHwDhOnFEJiivTA _model_server_result.datetime_utc '2024-11-05 00:30:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xhv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1401}' # _entry.id 4XHV # _exptl.entry_id 4XHV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XHV _cell.length_a 45.302 _cell.length_b 45.302 _cell.length_c 94.533 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XHV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N GLY 1 A GLY 1254 1_555 E ZN ZN . B ZN 1901 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc2 A O GLY 1 A GLY 1254 1_555 E ZN ZN . B ZN 1901 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc3 B N ASP 1 B ASP 1831 1_555 E ZN ZN . B ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 B O ASP 1 B ASP 1831 1_555 E ZN ZN . B ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc5 B OD1 ASP 1 B ASP 1831 1_555 E ZN ZN . B ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc6 B OD1 ASP 4 B ASP 1834 1_555 E ZN ZN . B ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 4XHV _atom_sites.fract_transf_matrix[1][1] 0.022074 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010578 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 1401 1 EDO EDO . D 4 CL A 1 1402 1 CL CL . E 5 ZN B 1 1901 1 ZN ZN . F 6 HOH A 1 1501 47 HOH HOH . F 6 HOH A 2 1502 51 HOH HOH . F 6 HOH A 3 1503 174 HOH HOH . F 6 HOH A 4 1504 152 HOH HOH . F 6 HOH A 5 1505 45 HOH HOH . F 6 HOH A 6 1506 7 HOH HOH . F 6 HOH A 7 1507 155 HOH HOH . F 6 HOH A 8 1508 163 HOH HOH . F 6 HOH A 9 1509 147 HOH HOH . F 6 HOH A 10 1510 21 HOH HOH . F 6 HOH A 11 1511 93 HOH HOH . F 6 HOH A 12 1512 167 HOH HOH . F 6 HOH A 13 1513 22 HOH HOH . F 6 HOH A 14 1514 172 HOH HOH . F 6 HOH A 15 1515 50 HOH HOH . F 6 HOH A 16 1516 12 HOH HOH . F 6 HOH A 17 1517 59 HOH HOH . F 6 HOH A 18 1518 76 HOH HOH . F 6 HOH A 19 1519 27 HOH HOH . F 6 HOH A 20 1520 153 HOH HOH . F 6 HOH A 21 1521 49 HOH HOH . F 6 HOH A 22 1522 8 HOH HOH . F 6 HOH A 23 1523 75 HOH HOH . F 6 HOH A 24 1524 145 HOH HOH . F 6 HOH A 25 1525 55 HOH HOH . F 6 HOH A 26 1526 13 HOH HOH . F 6 HOH A 27 1527 5 HOH HOH . F 6 HOH A 28 1528 115 HOH HOH . F 6 HOH A 29 1529 151 HOH HOH . F 6 HOH A 30 1530 23 HOH HOH . F 6 HOH A 31 1531 43 HOH HOH . F 6 HOH A 32 1532 35 HOH HOH . F 6 HOH A 33 1533 39 HOH HOH . F 6 HOH A 34 1534 129 HOH HOH . F 6 HOH A 35 1535 130 HOH HOH . F 6 HOH A 36 1536 31 HOH HOH . F 6 HOH A 37 1537 24 HOH HOH . F 6 HOH A 38 1538 124 HOH HOH . F 6 HOH A 39 1539 177 HOH HOH . F 6 HOH A 40 1540 4 HOH HOH . F 6 HOH A 41 1541 25 HOH HOH . F 6 HOH A 42 1542 164 HOH HOH . F 6 HOH A 43 1543 19 HOH HOH . F 6 HOH A 44 1544 33 HOH HOH . F 6 HOH A 45 1545 102 HOH HOH . F 6 HOH A 46 1546 62 HOH HOH . F 6 HOH A 47 1547 99 HOH HOH . F 6 HOH A 48 1548 144 HOH HOH . F 6 HOH A 49 1549 82 HOH HOH . F 6 HOH A 50 1550 70 HOH HOH . F 6 HOH A 51 1551 97 HOH HOH . F 6 HOH A 52 1552 15 HOH HOH . F 6 HOH A 53 1553 41 HOH HOH . F 6 HOH A 54 1554 14 HOH HOH . F 6 HOH A 55 1555 169 HOH HOH . F 6 HOH A 56 1556 61 HOH HOH . F 6 HOH A 57 1557 58 HOH HOH . F 6 HOH A 58 1558 42 HOH HOH . F 6 HOH A 59 1559 84 HOH HOH . F 6 HOH A 60 1560 139 HOH HOH . F 6 HOH A 61 1561 36 HOH HOH . F 6 HOH A 62 1562 98 HOH HOH . F 6 HOH A 63 1563 127 HOH HOH . F 6 HOH A 64 1564 17 HOH HOH . F 6 HOH A 65 1565 158 HOH HOH . F 6 HOH A 66 1566 52 HOH HOH . F 6 HOH A 67 1567 3 HOH HOH . F 6 HOH A 68 1568 86 HOH HOH . F 6 HOH A 69 1569 81 HOH HOH . F 6 HOH A 70 1570 16 HOH HOH . F 6 HOH A 71 1571 79 HOH HOH . F 6 HOH A 72 1572 166 HOH HOH . F 6 HOH A 73 1573 9 HOH HOH . F 6 HOH A 74 1574 119 HOH HOH . F 6 HOH A 75 1575 160 HOH HOH . F 6 HOH A 76 1576 87 HOH HOH . F 6 HOH A 77 1577 20 HOH HOH . F 6 HOH A 78 1578 10 HOH HOH . F 6 HOH A 79 1579 143 HOH HOH . F 6 HOH A 80 1580 65 HOH HOH . F 6 HOH A 81 1581 72 HOH HOH . F 6 HOH A 82 1582 54 HOH HOH . F 6 HOH A 83 1583 29 HOH HOH . F 6 HOH A 84 1584 121 HOH HOH . F 6 HOH A 85 1585 34 HOH HOH . F 6 HOH A 86 1586 26 HOH HOH . F 6 HOH A 87 1587 48 HOH HOH . F 6 HOH A 88 1588 77 HOH HOH . F 6 HOH A 89 1589 69 HOH HOH . F 6 HOH A 90 1590 80 HOH HOH . F 6 HOH A 91 1591 113 HOH HOH . F 6 HOH A 92 1592 173 HOH HOH . F 6 HOH A 93 1593 44 HOH HOH . F 6 HOH A 94 1594 53 HOH HOH . F 6 HOH A 95 1595 67 HOH HOH . F 6 HOH A 96 1596 94 HOH HOH . F 6 HOH A 97 1597 32 HOH HOH . F 6 HOH A 98 1598 109 HOH HOH . F 6 HOH A 99 1599 2 HOH HOH . F 6 HOH A 100 1600 170 HOH HOH . F 6 HOH A 101 1601 85 HOH HOH . F 6 HOH A 102 1602 146 HOH HOH . F 6 HOH A 103 1603 162 HOH HOH . F 6 HOH A 104 1604 88 HOH HOH . F 6 HOH A 105 1605 78 HOH HOH . F 6 HOH A 106 1606 71 HOH HOH . F 6 HOH A 107 1607 131 HOH HOH . F 6 HOH A 108 1608 159 HOH HOH . F 6 HOH A 109 1609 28 HOH HOH . F 6 HOH A 110 1610 100 HOH HOH . F 6 HOH A 111 1611 135 HOH HOH . F 6 HOH A 112 1612 108 HOH HOH . F 6 HOH A 113 1613 128 HOH HOH . F 6 HOH A 114 1614 112 HOH HOH . F 6 HOH A 115 1615 64 HOH HOH . F 6 HOH A 116 1616 168 HOH HOH . F 6 HOH A 117 1617 114 HOH HOH . F 6 HOH A 118 1618 175 HOH HOH . F 6 HOH A 119 1619 138 HOH HOH . F 6 HOH A 120 1620 83 HOH HOH . F 6 HOH A 121 1621 103 HOH HOH . F 6 HOH A 122 1622 107 HOH HOH . F 6 HOH A 123 1623 63 HOH HOH . F 6 HOH A 124 1624 126 HOH HOH . F 6 HOH A 125 1625 46 HOH HOH . F 6 HOH A 126 1626 38 HOH HOH . F 6 HOH A 127 1627 92 HOH HOH . F 6 HOH A 128 1628 141 HOH HOH . F 6 HOH A 129 1629 137 HOH HOH . F 6 HOH A 130 1630 118 HOH HOH . F 6 HOH A 131 1631 149 HOH HOH . F 6 HOH A 132 1632 156 HOH HOH . F 6 HOH A 133 1633 133 HOH HOH . F 6 HOH A 134 1634 136 HOH HOH . F 6 HOH A 135 1635 60 HOH HOH . F 6 HOH A 136 1636 161 HOH HOH . F 6 HOH A 137 1637 101 HOH HOH . F 6 HOH A 138 1638 106 HOH HOH . F 6 HOH A 139 1639 73 HOH HOH . F 6 HOH A 140 1640 68 HOH HOH . F 6 HOH A 141 1641 105 HOH HOH . F 6 HOH A 142 1642 116 HOH HOH . F 6 HOH A 143 1643 90 HOH HOH . F 6 HOH A 144 1644 6 HOH HOH . F 6 HOH A 145 1645 165 HOH HOH . F 6 HOH A 146 1646 120 HOH HOH . F 6 HOH A 147 1647 91 HOH HOH . F 6 HOH A 148 1648 11 HOH HOH . F 6 HOH A 149 1649 117 HOH HOH . F 6 HOH A 150 1650 30 HOH HOH . F 6 HOH A 151 1651 74 HOH HOH . F 6 HOH A 152 1652 157 HOH HOH . F 6 HOH A 153 1653 125 HOH HOH . F 6 HOH A 154 1654 96 HOH HOH . F 6 HOH A 155 1655 150 HOH HOH . F 6 HOH A 156 1656 148 HOH HOH . F 6 HOH A 157 1657 154 HOH HOH . F 6 HOH A 158 1658 104 HOH HOH . G 6 HOH B 1 2001 89 HOH HOH . G 6 HOH B 2 2002 18 HOH HOH . G 6 HOH B 3 2003 123 HOH HOH . G 6 HOH B 4 2004 140 HOH HOH . G 6 HOH B 5 2005 56 HOH HOH . G 6 HOH B 6 2006 37 HOH HOH . G 6 HOH B 7 2007 57 HOH HOH . G 6 HOH B 8 2008 142 HOH HOH . G 6 HOH B 9 2009 122 HOH HOH . G 6 HOH B 10 2010 132 HOH HOH . G 6 HOH B 11 2011 66 HOH HOH . G 6 HOH B 12 2012 134 HOH HOH . G 6 HOH B 13 2013 95 HOH HOH . G 6 HOH B 14 2014 110 HOH HOH . G 6 HOH B 15 2015 176 HOH HOH . G 6 HOH B 16 2016 40 HOH HOH . G 6 HOH B 17 2017 111 HOH HOH . G 6 HOH B 18 2018 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 4.317 9.226 -19.124 1 21.63 ? C1 EDO 1401 A 1 HETATM 2 O O1 EDO . . . C 3 2.893 9.332 -19.497 1 24.43 ? O1 EDO 1401 A 1 HETATM 3 C C2 EDO . . . C 3 4.498 9.803 -17.699 1 18.72 ? C2 EDO 1401 A 1 HETATM 4 O O2 EDO . . . C 3 3.758 9.008 -16.755 1 18.19 ? O2 EDO 1401 A 1 HETATM 5 H H11 EDO . . . C 3 4.931 9.785 -19.833 1 25.96 ? H11 EDO 1401 A 1 HETATM 6 H H12 EDO . . . C 3 4.631 8.18 -19.145 1 25.96 ? H12 EDO 1401 A 1 HETATM 7 H HO1 EDO . . . C 3 2.765 8.975 -20.387 1 29.32 ? HO1 EDO 1401 A 1 HETATM 8 H H21 EDO . . . C 3 5.557 9.802 -17.432 1 22.46 ? H21 EDO 1401 A 1 HETATM 9 H H22 EDO . . . C 3 4.141 10.835 -17.671 1 22.46 ? H22 EDO 1401 A 1 HETATM 10 H HO2 EDO . . . C 3 3.874 9.371 -15.866 1 21.83 ? HO2 EDO 1401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #