data_4XLI # _model_server_result.job_id gdCJLWZ6rx2PJGyOTE53fA _model_server_result.datetime_utc '2025-07-30 16:06:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":600}' # _entry.id 4XLI # _exptl.entry_id 4XLI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 488.006 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XLI _cell.length_a 109.688 _cell.length_b 109.688 _cell.length_c 121.52 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 120 A GLU 398 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc2 A OE2 GLU 120 A GLU 398 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc3 A ND1 HIS 258 A HIS 536 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc4 D ZN ZN . A ZN 602 1_555 B OE2 GLU 120 B GLU 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.829 ? metalc ? metalc5 D ZN ZN . A ZN 602 1_555 B ND1 HIS 258 B HIS 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? # _chem_comp.formula 'C22 H26 Cl N7 O2 S' _chem_comp.formula_weight 488.006 _chem_comp.id 1N1 _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Dasatinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 1N1 doub 1 n y C1 N1 1N1 sing 2 n y C1 H1 1N1 sing 3 n n C2 C3 1N1 sing 4 n n C2 S 1N1 sing 5 n y C3 N2 1N1 sing 6 n n C3 O 1N1 doub 7 n n N6 C20 1N1 sing 8 n n N6 C17 1N1 sing 9 n n N6 C18 1N1 sing 10 n n C7 C8 1N1 doub 11 n y C7 C6 1N1 sing 12 n y C7 H7 1N1 sing 13 n n C8 C9 1N1 sing 14 n y C8 H8 1N1 sing 15 n n C9 C10 1N1 sing 16 n n C9 C4 1N1 doub 17 n y C10 H101 1N1 sing 18 n n C10 H102 1N1 sing 19 n n C10 H103 1N1 sing 20 n n C11 C12 1N1 sing 21 n y C11 N 1N1 sing 22 n n C11 N4 1N1 doub 23 n y C12 C13 1N1 doub 24 n y C12 H12 1N1 sing 25 n n C13 N3 1N1 sing 26 n y C13 N5 1N1 sing 27 n n C14 C15 1N1 sing 28 n n C14 N3 1N1 doub 29 n y C14 N4 1N1 sing 30 n y C15 H151 1N1 sing 31 n n C15 H152 1N1 sing 32 n n C15 H153 1N1 sing 33 n n C16 N5 1N1 sing 34 n n C16 C17 1N1 sing 35 n n C16 H161 1N1 sing 36 n n C16 H162 1N1 sing 37 n n C19 N5 1N1 sing 38 n n C19 C18 1N1 sing 39 n n C19 H191 1N1 sing 40 n n C19 H192 1N1 sing 41 n n C20 C21 1N1 sing 42 n n C20 H201 1N1 sing 43 n n C20 H202 1N1 sing 44 n n C21 O1 1N1 sing 45 n n C21 H211 1N1 sing 46 n n C21 H212 1N1 sing 47 n n N C 1N1 sing 48 n n N HN 1N1 sing 49 n n C N1 1N1 doub 50 n y C S 1N1 sing 51 n y N2 C4 1N1 sing 52 n n N2 HN2 1N1 sing 53 n n C4 C5 1N1 sing 54 n y C5 C6 1N1 doub 55 n y C5 CL 1N1 sing 56 n n C6 H6 1N1 sing 57 n n C17 H171 1N1 sing 58 n n C17 H172 1N1 sing 59 n n C18 H181 1N1 sing 60 n n C18 H182 1N1 sing 61 n n O1 HO1 1N1 sing 62 n n # _atom_sites.entry_id 4XLI _atom_sites.fract_transf_matrix[1][1] 0.009117 _atom_sites.fract_transf_matrix[1][2] 0.005264 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1N1 A 1 601 600 1N1 1N1 . D 3 ZN A 1 602 1 ZN ZN . E 2 1N1 B 1 600 600 1N1 1N1 . F 4 HOH A 1 701 3 HOH HOH . F 4 HOH A 2 702 6 HOH HOH . F 4 HOH A 3 703 28 HOH HOH . F 4 HOH A 4 704 8 HOH HOH . F 4 HOH A 5 705 12 HOH HOH . F 4 HOH A 6 706 2 HOH HOH . F 4 HOH A 7 707 14 HOH HOH . F 4 HOH A 8 708 11 HOH HOH . F 4 HOH A 9 709 5 HOH HOH . F 4 HOH A 10 710 24 HOH HOH . F 4 HOH A 11 711 1 HOH HOH . F 4 HOH A 12 712 27 HOH HOH . F 4 HOH A 13 713 4 HOH HOH . F 4 HOH A 14 714 7 HOH HOH . F 4 HOH A 15 715 13 HOH HOH . F 4 HOH A 16 716 26 HOH HOH . F 4 HOH A 17 717 9 HOH HOH . F 4 HOH A 18 718 10 HOH HOH . G 4 HOH B 1 701 23 HOH HOH . G 4 HOH B 2 702 16 HOH HOH . G 4 HOH B 3 703 19 HOH HOH . G 4 HOH B 4 704 29 HOH HOH . G 4 HOH B 5 705 20 HOH HOH . G 4 HOH B 6 706 17 HOH HOH . G 4 HOH B 7 707 25 HOH HOH . G 4 HOH B 8 708 32 HOH HOH . G 4 HOH B 9 709 18 HOH HOH . G 4 HOH B 10 710 22 HOH HOH . G 4 HOH B 11 711 21 HOH HOH . G 4 HOH B 12 712 30 HOH HOH . G 4 HOH B 13 713 31 HOH HOH . G 4 HOH B 14 714 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1N1 . . . E 2 52.16 55.437 -23.743 1 50.75 ? C1 1N1 600 B 1 HETATM 2 C C2 1N1 . . . E 2 53.463 55.861 -24.044 1 43.12 ? C2 1N1 600 B 1 HETATM 3 C C3 1N1 . . . E 2 54.547 55.295 -24.928 1 50.86 ? C3 1N1 600 B 1 HETATM 4 N N6 1N1 . . . E 2 51.643 63.921 -16.777 1 83.84 ? N6 1N1 600 B 1 HETATM 5 C C7 1N1 . . . E 2 56.994 52.583 -28.158 1 47.36 ? C7 1N1 600 B 1 HETATM 6 C C8 1N1 . . . E 2 56.822 52.116 -26.85 1 47.2 ? C8 1N1 600 B 1 HETATM 7 C C9 1N1 . . . E 2 55.835 52.649 -26.045 1 47.7 ? C9 1N1 600 B 1 HETATM 8 C C10 1N1 . . . E 2 55.656 52.157 -24.666 1 41.54 ? C10 1N1 600 B 1 HETATM 9 C C11 1N1 . . . E 2 52.678 59.143 -21.083 1 52.82 ? C11 1N1 600 B 1 HETATM 10 C C12 1N1 . . . E 2 52.161 59.984 -20.11 1 54.26 ? C12 1N1 600 B 1 HETATM 11 C C13 1N1 . . . E 2 52.959 61.002 -19.571 1 63.66 ? C13 1N1 600 B 1 HETATM 12 C C14 1N1 . . . E 2 54.736 60.291 -20.936 1 53.75 ? C14 1N1 600 B 1 HETATM 13 C C15 1N1 . . . E 2 56.131 60.501 -21.408 1 45.59 ? C15 1N1 600 B 1 HETATM 14 C C16 1N1 . . . E 2 53.056 63.24 -18.72 1 66.66 ? C16 1N1 600 B 1 HETATM 15 C C19 1N1 . . . E 2 51.046 62.02 -18.388 1 62.13 ? C19 1N1 600 B 1 HETATM 16 C C20 1N1 . . . E 2 51.816 64.307 -15.341 1 87.51 ? C20 1N1 600 B 1 HETATM 17 C C21 1N1 . . . E 2 50.673 63.942 -14.388 1 91.67 ? C21 1N1 600 B 1 HETATM 18 N N 1N1 . . . E 2 51.868 58.169 -21.576 1 49.62 ? N 1N1 600 B 1 HETATM 19 C C 1N1 . . . E 2 52.301 57.243 -22.463 1 49.42 ? C 1N1 600 B 1 HETATM 20 N N1 1N1 . . . E 2 51.481 56.226 -22.829 1 49.73 ? N1 1N1 600 B 1 HETATM 21 S S 1N1 . . . E 2 53.893 57.3 -23.173 1 46.44 ? S 1N1 600 B 1 HETATM 22 N N2 1N1 . . . E 2 54.095 54.413 -25.799 1 54.74 ? N2 1N1 600 B 1 HETATM 23 C C4 1N1 . . . E 2 54.931 53.687 -26.579 1 52.69 ? C4 1N1 600 B 1 HETATM 24 C C5 1N1 . . . E 2 55.205 54.13 -27.923 1 54.42 ? C5 1N1 600 B 1 HETATM 25 C C6 1N1 . . . E 2 56.217 53.592 -28.693 1 49.21 ? C6 1N1 600 B 1 HETATM 26 CL CL 1N1 . . . E 2 54.149 55.416 -28.509 1 83.85 ? CL 1N1 600 B 1 HETATM 27 O O 1N1 . . . E 2 55.727 55.594 -24.798 1 66.89 ? O 1N1 600 B 1 HETATM 28 N N3 1N1 . . . E 2 54.258 61.103 -19.973 1 57.73 ? N3 1N1 600 B 1 HETATM 29 N N4 1N1 . . . E 2 53.969 59.312 -21.483 1 52.67 ? N4 1N1 600 B 1 HETATM 30 N N5 1N1 . . . E 2 52.501 61.888 -18.556 1 65.2 ? N5 1N1 600 B 1 HETATM 31 C C17 1N1 . . . E 2 53.019 63.824 -17.323 1 73.47 ? C17 1N1 600 B 1 HETATM 32 C C18 1N1 . . . E 2 50.788 62.714 -17.041 1 73.3 ? C18 1N1 600 B 1 HETATM 33 O O1 1N1 . . . E 2 51.15 62.941 -13.474 1 86.18 ? O1 1N1 600 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 41 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 479 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 33 #