data_4XLV # _model_server_result.job_id U7uRiP2FwZvpouTSrCJeSw _model_server_result.datetime_utc '2025-07-31 03:00:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xlv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1303}' # _entry.id 4XLV # _exptl.entry_id 4XLV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XLV _cell.length_a 66.982 _cell.length_b 66.982 _cell.length_c 136.58 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XLV _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 136.58 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 202 A ILE 1157 1_555 A N PTR 203 A PTR 1158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C PTR 203 A PTR 1158 1_555 A N GLU 204 A GLU 1159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C ASP 206 A ASP 1161 1_555 A N PTR 207 A PTR 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C PTR 207 A PTR 1162 1_555 A N PTR 208 A PTR 1163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C PTR 208 A PTR 1163 1_555 A N ARG 209 A ARG 1164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc1 A OD1 ASN 182 A ASN 1137 1_555 C MG MG . A MG 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc2 A OD2 ASP 195 A ASP 1150 1_555 C MG MG . A MG 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc3 B O1B ACP . A ACP 1301 1_555 C MG MG . A MG 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc4 B O1A ACP . A ACP 1301 1_555 C MG MG . A MG 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc5 B O3G ACP . A ACP 1301 1_555 D MG MG . A MG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc6 B O2B ACP . A ACP 1301 1_555 D MG MG . A MG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc7 C MG MG . A MG 1302 1_555 E O HOH . A HOH 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc8 D MG MG . A MG 1303 1_555 E O HOH . A HOH 1478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc9 D MG MG . A MG 1303 1_555 E O HOH . A HOH 1487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XLV _atom_sites.fract_transf_matrix[1][1] 0.014929 _atom_sites.fract_transf_matrix[1][2] 0.008619 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACP A 1 1301 200 ACP ACP . C 3 MG A 1 1302 201 MG MG . D 3 MG A 1 1303 202 MG MG . E 4 HOH A 1 1401 51 HOH HOH . E 4 HOH A 2 1402 125 HOH HOH . E 4 HOH A 3 1403 54 HOH HOH . E 4 HOH A 4 1404 80 HOH HOH . E 4 HOH A 5 1405 138 HOH HOH . E 4 HOH A 6 1406 11 HOH HOH . E 4 HOH A 7 1407 142 HOH HOH . E 4 HOH A 8 1408 69 HOH HOH . E 4 HOH A 9 1409 143 HOH HOH . E 4 HOH A 10 1410 17 HOH HOH . E 4 HOH A 11 1411 127 HOH HOH . E 4 HOH A 12 1412 47 HOH HOH . E 4 HOH A 13 1413 73 HOH HOH . E 4 HOH A 14 1414 18 HOH HOH . E 4 HOH A 15 1415 62 HOH HOH . E 4 HOH A 16 1416 128 HOH HOH . E 4 HOH A 17 1417 93 HOH HOH . E 4 HOH A 18 1418 116 HOH HOH . E 4 HOH A 19 1419 8 HOH HOH . E 4 HOH A 20 1420 95 HOH HOH . E 4 HOH A 21 1421 27 HOH HOH . E 4 HOH A 22 1422 63 HOH HOH . E 4 HOH A 23 1423 85 HOH HOH . E 4 HOH A 24 1424 99 HOH HOH . E 4 HOH A 25 1425 106 HOH HOH . E 4 HOH A 26 1426 123 HOH HOH . E 4 HOH A 27 1427 94 HOH HOH . E 4 HOH A 28 1428 77 HOH HOH . E 4 HOH A 29 1429 119 HOH HOH . E 4 HOH A 30 1430 98 HOH HOH . E 4 HOH A 31 1431 1 HOH HOH . E 4 HOH A 32 1432 2 HOH HOH . E 4 HOH A 33 1433 3 HOH HOH . E 4 HOH A 34 1434 4 HOH HOH . E 4 HOH A 35 1435 5 HOH HOH . E 4 HOH A 36 1436 6 HOH HOH . E 4 HOH A 37 1437 7 HOH HOH . E 4 HOH A 38 1438 9 HOH HOH . E 4 HOH A 39 1439 10 HOH HOH . E 4 HOH A 40 1440 12 HOH HOH . E 4 HOH A 41 1441 13 HOH HOH . E 4 HOH A 42 1442 14 HOH HOH . E 4 HOH A 43 1443 15 HOH HOH . E 4 HOH A 44 1444 16 HOH HOH . E 4 HOH A 45 1445 19 HOH HOH . E 4 HOH A 46 1446 20 HOH HOH . E 4 HOH A 47 1447 21 HOH HOH . E 4 HOH A 48 1448 22 HOH HOH . E 4 HOH A 49 1449 23 HOH HOH . E 4 HOH A 50 1450 24 HOH HOH . E 4 HOH A 51 1451 25 HOH HOH . E 4 HOH A 52 1452 26 HOH HOH . E 4 HOH A 53 1453 28 HOH HOH . E 4 HOH A 54 1454 29 HOH HOH . E 4 HOH A 55 1455 30 HOH HOH . E 4 HOH A 56 1456 31 HOH HOH . E 4 HOH A 57 1457 32 HOH HOH . E 4 HOH A 58 1458 33 HOH HOH . E 4 HOH A 59 1459 34 HOH HOH . E 4 HOH A 60 1460 35 HOH HOH . E 4 HOH A 61 1461 36 HOH HOH . E 4 HOH A 62 1462 37 HOH HOH . E 4 HOH A 63 1463 38 HOH HOH . E 4 HOH A 64 1464 39 HOH HOH . E 4 HOH A 65 1465 40 HOH HOH . E 4 HOH A 66 1466 41 HOH HOH . E 4 HOH A 67 1467 42 HOH HOH . E 4 HOH A 68 1468 43 HOH HOH . E 4 HOH A 69 1469 44 HOH HOH . E 4 HOH A 70 1470 45 HOH HOH . E 4 HOH A 71 1471 46 HOH HOH . E 4 HOH A 72 1472 48 HOH HOH . E 4 HOH A 73 1473 49 HOH HOH . E 4 HOH A 74 1474 50 HOH HOH . E 4 HOH A 75 1475 52 HOH HOH . E 4 HOH A 76 1476 53 HOH HOH . E 4 HOH A 77 1477 55 HOH HOH . E 4 HOH A 78 1478 56 HOH HOH . E 4 HOH A 79 1479 57 HOH HOH . E 4 HOH A 80 1480 58 HOH HOH . E 4 HOH A 81 1481 59 HOH HOH . E 4 HOH A 82 1482 60 HOH HOH . E 4 HOH A 83 1483 61 HOH HOH . E 4 HOH A 84 1484 64 HOH HOH . E 4 HOH A 85 1485 65 HOH HOH . E 4 HOH A 86 1486 66 HOH HOH . E 4 HOH A 87 1487 67 HOH HOH . E 4 HOH A 88 1488 68 HOH HOH . E 4 HOH A 89 1489 70 HOH HOH . E 4 HOH A 90 1490 71 HOH HOH . E 4 HOH A 91 1491 72 HOH HOH . E 4 HOH A 92 1492 74 HOH HOH . E 4 HOH A 93 1493 75 HOH HOH . E 4 HOH A 94 1494 76 HOH HOH . E 4 HOH A 95 1495 79 HOH HOH . E 4 HOH A 96 1496 81 HOH HOH . E 4 HOH A 97 1497 82 HOH HOH . E 4 HOH A 98 1498 83 HOH HOH . E 4 HOH A 99 1499 84 HOH HOH . E 4 HOH A 100 1500 86 HOH HOH . E 4 HOH A 101 1501 87 HOH HOH . E 4 HOH A 102 1502 88 HOH HOH . E 4 HOH A 103 1503 89 HOH HOH . E 4 HOH A 104 1504 90 HOH HOH . E 4 HOH A 105 1505 91 HOH HOH . E 4 HOH A 106 1506 92 HOH HOH . E 4 HOH A 107 1507 96 HOH HOH . E 4 HOH A 108 1508 97 HOH HOH . E 4 HOH A 109 1509 100 HOH HOH . E 4 HOH A 110 1510 101 HOH HOH . E 4 HOH A 111 1511 102 HOH HOH . E 4 HOH A 112 1512 103 HOH HOH . E 4 HOH A 113 1513 104 HOH HOH . E 4 HOH A 114 1514 105 HOH HOH . E 4 HOH A 115 1515 108 HOH HOH . E 4 HOH A 116 1516 109 HOH HOH . E 4 HOH A 117 1517 110 HOH HOH . E 4 HOH A 118 1518 111 HOH HOH . E 4 HOH A 119 1519 112 HOH HOH . E 4 HOH A 120 1520 113 HOH HOH . E 4 HOH A 121 1521 114 HOH HOH . E 4 HOH A 122 1522 115 HOH HOH . E 4 HOH A 123 1523 117 HOH HOH . E 4 HOH A 124 1524 118 HOH HOH . E 4 HOH A 125 1525 120 HOH HOH . E 4 HOH A 126 1526 121 HOH HOH . E 4 HOH A 127 1527 122 HOH HOH . E 4 HOH A 128 1528 124 HOH HOH . E 4 HOH A 129 1529 126 HOH HOH . E 4 HOH A 130 1530 129 HOH HOH . E 4 HOH A 131 1531 130 HOH HOH . E 4 HOH A 132 1532 131 HOH HOH . E 4 HOH A 133 1533 132 HOH HOH . E 4 HOH A 134 1534 133 HOH HOH . E 4 HOH A 135 1535 134 HOH HOH . E 4 HOH A 136 1536 135 HOH HOH . E 4 HOH A 137 1537 136 HOH HOH . E 4 HOH A 138 1538 137 HOH HOH . E 4 HOH A 139 1539 139 HOH HOH . E 4 HOH A 140 1540 140 HOH HOH . E 4 HOH A 141 1541 141 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 31.185 _atom_site.Cartn_y 10.179 _atom_site.Cartn_z 56.368 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 514 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #