data_4XM2 # _model_server_result.job_id SSpfq3ibkJUXiy9GQyYUNg _model_server_result.datetime_utc '2024-11-27 02:43:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xm2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":301}' # _entry.id 4XM2 # _exptl.entry_id 4XM2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.88 _cell.angle_gamma 90 _cell.entry_id 4XM2 _cell.length_a 81.634 _cell.length_b 121.825 _cell.length_c 92.133 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XM2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 40 A HIS 40 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A OD2 ASP 43 A ASP 43 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc3 A NE2 HIS 151 A HIS 151 1_555 G ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc4 B ND1 HIS 40 B HIS 40 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc5 B OD2 ASP 43 B ASP 43 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc6 B NE2 HIS 151 B HIS 151 1_555 H ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc7 C ND1 HIS 40 C HIS 40 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc8 C OD2 ASP 43 C ASP 43 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc9 C NE2 HIS 151 C HIS 151 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc10 D ND1 HIS 40 D HIS 40 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc11 D OD2 ASP 43 D ASP 43 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc12 D NE2 HIS 151 D HIS 151 1_555 J ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc13 J ZN ZN . D ZN 301 1_555 P O HOH . D HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc14 J ZN ZN . D ZN 301 1_555 R O HOH . F HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc15 E ND1 HIS 40 E HIS 40 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc16 E OD2 ASP 43 E ASP 43 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc17 E NE2 HIS 151 E HIS 151 1_555 K ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc18 K ZN ZN . E ZN 301 1_555 Q O HOH . E HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc19 F ND1 HIS 40 F HIS 40 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc20 F OD2 ASP 43 F ASP 43 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc21 F NE2 HIS 151 F HIS 151 1_555 L ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc22 L ZN ZN . F ZN 301 1_555 R O HOH . F HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XM2 _atom_sites.fract_transf_matrix[1][1] 0.01225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005424 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ZN A 1 301 1 ZN ZN . H 2 ZN B 1 301 4 ZN ZN . I 2 ZN C 1 301 5 ZN ZN . J 2 ZN D 1 301 2 ZN ZN . K 2 ZN E 1 301 6 ZN ZN . L 2 ZN F 1 301 3 ZN ZN . M 3 HOH A 1 401 101 HOH HOH . M 3 HOH A 2 402 12 HOH HOH . M 3 HOH A 3 403 28 HOH HOH . M 3 HOH A 4 404 29 HOH HOH . M 3 HOH A 5 405 32 HOH HOH . M 3 HOH A 6 406 37 HOH HOH . M 3 HOH A 7 407 38 HOH HOH . M 3 HOH A 8 408 41 HOH HOH . M 3 HOH A 9 409 42 HOH HOH . M 3 HOH A 10 410 43 HOH HOH . M 3 HOH A 11 411 48 HOH HOH . M 3 HOH A 12 412 74 HOH HOH . M 3 HOH A 13 413 77 HOH HOH . M 3 HOH A 14 414 79 HOH HOH . M 3 HOH A 15 415 81 HOH HOH . M 3 HOH A 16 416 94 HOH HOH . M 3 HOH A 17 417 99 HOH HOH . N 3 HOH B 1 401 3 HOH HOH . N 3 HOH B 2 402 4 HOH HOH . N 3 HOH B 3 403 14 HOH HOH . N 3 HOH B 4 404 16 HOH HOH . N 3 HOH B 5 405 17 HOH HOH . N 3 HOH B 6 406 19 HOH HOH . N 3 HOH B 7 407 22 HOH HOH . N 3 HOH B 8 408 23 HOH HOH . N 3 HOH B 9 409 46 HOH HOH . N 3 HOH B 10 410 47 HOH HOH . N 3 HOH B 11 411 52 HOH HOH . N 3 HOH B 12 412 100 HOH HOH . N 3 HOH B 13 413 105 HOH HOH . N 3 HOH B 14 414 106 HOH HOH . N 3 HOH B 15 415 108 HOH HOH . N 3 HOH B 16 416 114 HOH HOH . O 3 HOH C 1 401 11 HOH HOH . O 3 HOH C 2 402 18 HOH HOH . O 3 HOH C 3 403 33 HOH HOH . O 3 HOH C 4 404 34 HOH HOH . O 3 HOH C 5 405 35 HOH HOH . O 3 HOH C 6 406 36 HOH HOH . O 3 HOH C 7 407 55 HOH HOH . O 3 HOH C 8 408 58 HOH HOH . O 3 HOH C 9 409 60 HOH HOH . O 3 HOH C 10 410 61 HOH HOH . O 3 HOH C 11 411 63 HOH HOH . O 3 HOH C 12 412 67 HOH HOH . O 3 HOH C 13 413 84 HOH HOH . O 3 HOH C 14 414 92 HOH HOH . O 3 HOH C 15 415 97 HOH HOH . O 3 HOH C 16 416 109 HOH HOH . O 3 HOH C 17 417 112 HOH HOH . O 3 HOH C 18 418 113 HOH HOH . P 3 HOH D 1 401 1 HOH HOH . P 3 HOH D 2 402 8 HOH HOH . P 3 HOH D 3 403 13 HOH HOH . P 3 HOH D 4 404 31 HOH HOH . P 3 HOH D 5 405 40 HOH HOH . P 3 HOH D 6 406 45 HOH HOH . P 3 HOH D 7 407 49 HOH HOH . P 3 HOH D 8 408 51 HOH HOH . P 3 HOH D 9 409 64 HOH HOH . P 3 HOH D 10 410 65 HOH HOH . P 3 HOH D 11 411 69 HOH HOH . P 3 HOH D 12 412 71 HOH HOH . P 3 HOH D 13 413 72 HOH HOH . P 3 HOH D 14 414 73 HOH HOH . P 3 HOH D 15 415 75 HOH HOH . P 3 HOH D 16 416 78 HOH HOH . P 3 HOH D 17 417 83 HOH HOH . P 3 HOH D 18 418 88 HOH HOH . P 3 HOH D 19 419 89 HOH HOH . P 3 HOH D 20 420 93 HOH HOH . P 3 HOH D 21 421 102 HOH HOH . P 3 HOH D 22 422 104 HOH HOH . P 3 HOH D 23 423 110 HOH HOH . P 3 HOH D 24 424 111 HOH HOH . Q 3 HOH E 1 401 5 HOH HOH . Q 3 HOH E 2 402 7 HOH HOH . Q 3 HOH E 3 403 9 HOH HOH . Q 3 HOH E 4 404 20 HOH HOH . Q 3 HOH E 5 405 21 HOH HOH . Q 3 HOH E 6 406 25 HOH HOH . Q 3 HOH E 7 407 27 HOH HOH . Q 3 HOH E 8 408 54 HOH HOH . Q 3 HOH E 9 409 59 HOH HOH . Q 3 HOH E 10 410 70 HOH HOH . Q 3 HOH E 11 411 85 HOH HOH . Q 3 HOH E 12 412 86 HOH HOH . Q 3 HOH E 13 413 87 HOH HOH . Q 3 HOH E 14 414 90 HOH HOH . Q 3 HOH E 15 415 95 HOH HOH . Q 3 HOH E 16 416 96 HOH HOH . Q 3 HOH E 17 417 98 HOH HOH . Q 3 HOH E 18 418 103 HOH HOH . R 3 HOH F 1 401 2 HOH HOH . R 3 HOH F 2 402 6 HOH HOH . R 3 HOH F 3 403 10 HOH HOH . R 3 HOH F 4 404 15 HOH HOH . R 3 HOH F 5 405 24 HOH HOH . R 3 HOH F 6 406 26 HOH HOH . R 3 HOH F 7 407 30 HOH HOH . R 3 HOH F 8 408 39 HOH HOH . R 3 HOH F 9 409 44 HOH HOH . R 3 HOH F 10 410 50 HOH HOH . R 3 HOH F 11 411 53 HOH HOH . R 3 HOH F 12 412 56 HOH HOH . R 3 HOH F 13 413 57 HOH HOH . R 3 HOH F 14 414 62 HOH HOH . R 3 HOH F 15 415 66 HOH HOH . R 3 HOH F 16 416 68 HOH HOH . R 3 HOH F 17 417 76 HOH HOH . R 3 HOH F 18 418 80 HOH HOH . R 3 HOH F 19 419 82 HOH HOH . R 3 HOH F 20 420 91 HOH HOH . R 3 HOH F 21 421 107 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 2 _atom_site.Cartn_x 48.646 _atom_site.Cartn_y -31.617 _atom_site.Cartn_z 32.605 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #