data_4XM6
#
_model_server_result.job_id            6y_J91G7tr47CgWX1XIFyg 
_model_server_result.datetime_utc      '2024-11-23 03:34:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xm6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":803}' 
#
_entry.id    4XM6 
#
_exptl.entry_id    4XM6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4XM6 
_cell.length_a            57.936 
_cell.length_b            76.922 
_cell.length_c            138.576 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XM6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 425 A HIS 686 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc2 A NE2 HIS 429 A HIS 690 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc3 A OE1 GLU 474 A GLU 735 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc4 A OE2 GLU 474 A GLU 735 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc5 B O4 41R . A 41R 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc6 B O5 41R . A 41R 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 119 n n 
C1 C2 EDO sing 120 n n 
C1 H11 EDO sing 121 n n 
C1 H12 EDO sing 122 n n 
O1 HO1 EDO sing 123 n n 
C2 O2 EDO sing 124 n n 
C2 H21 EDO sing 125 n n 
C2 H22 EDO sing 126 n n 
O2 HO2 EDO sing 127 n n 
#
_atom_sites.entry_id                     4XM6 
_atom_sites.fract_transf_matrix[1][1]    0.01726 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007216 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 41R A 1 801 1 41R INH . 
C 3 ZN A 1 802 2 ZN ZN . 
D 4 EDO A 1 803 1 EDO EDO . 
E 4 EDO A 1 804 1 EDO EDO . 
F 5 HOH A 1 901 95 HOH HOH . 
F 5 HOH A 2 902 63 HOH HOH . 
F 5 HOH A 3 903 43 HOH HOH . 
F 5 HOH A 4 904 21 HOH HOH . 
F 5 HOH A 5 905 25 HOH HOH . 
F 5 HOH A 6 906 19 HOH HOH . 
F 5 HOH A 7 907 28 HOH HOH . 
F 5 HOH A 8 908 46 HOH HOH . 
F 5 HOH A 9 909 67 HOH HOH . 
F 5 HOH A 10 910 8 HOH HOH . 
F 5 HOH A 11 911 84 HOH HOH . 
F 5 HOH A 12 912 13 HOH HOH . 
F 5 HOH A 13 913 103 HOH HOH . 
F 5 HOH A 14 914 64 HOH HOH . 
F 5 HOH A 15 915 112 HOH HOH . 
F 5 HOH A 16 916 114 HOH HOH . 
F 5 HOH A 17 917 106 HOH HOH . 
F 5 HOH A 18 918 73 HOH HOH . 
F 5 HOH A 19 919 2 HOH HOH . 
F 5 HOH A 20 920 118 HOH HOH . 
F 5 HOH A 21 921 107 HOH HOH . 
F 5 HOH A 22 922 24 HOH HOH . 
F 5 HOH A 23 923 3 HOH HOH . 
F 5 HOH A 24 924 1 HOH HOH . 
F 5 HOH A 25 925 2 HOH HOH . 
F 5 HOH A 26 926 3 HOH HOH . 
F 5 HOH A 27 927 4 HOH HOH . 
F 5 HOH A 28 928 5 HOH HOH . 
F 5 HOH A 29 929 6 HOH HOH . 
F 5 HOH A 30 930 7 HOH HOH . 
F 5 HOH A 31 931 9 HOH HOH . 
F 5 HOH A 32 932 10 HOH HOH . 
F 5 HOH A 33 933 11 HOH HOH . 
F 5 HOH A 34 934 12 HOH HOH . 
F 5 HOH A 35 935 14 HOH HOH . 
F 5 HOH A 36 936 15 HOH HOH . 
F 5 HOH A 37 937 16 HOH HOH . 
F 5 HOH A 38 938 17 HOH HOH . 
F 5 HOH A 39 939 18 HOH HOH . 
F 5 HOH A 40 940 20 HOH HOH . 
F 5 HOH A 41 941 22 HOH HOH . 
F 5 HOH A 42 942 23 HOH HOH . 
F 5 HOH A 43 943 26 HOH HOH . 
F 5 HOH A 44 944 27 HOH HOH . 
F 5 HOH A 45 945 29 HOH HOH . 
F 5 HOH A 46 946 30 HOH HOH . 
F 5 HOH A 47 947 31 HOH HOH . 
F 5 HOH A 48 948 32 HOH HOH . 
F 5 HOH A 49 949 33 HOH HOH . 
F 5 HOH A 50 950 34 HOH HOH . 
F 5 HOH A 51 951 35 HOH HOH . 
F 5 HOH A 52 952 36 HOH HOH . 
F 5 HOH A 53 953 38 HOH HOH . 
F 5 HOH A 54 954 39 HOH HOH . 
F 5 HOH A 55 955 40 HOH HOH . 
F 5 HOH A 56 956 41 HOH HOH . 
F 5 HOH A 57 957 42 HOH HOH . 
F 5 HOH A 58 958 44 HOH HOH . 
F 5 HOH A 59 959 45 HOH HOH . 
F 5 HOH A 60 960 47 HOH HOH . 
F 5 HOH A 61 961 48 HOH HOH . 
F 5 HOH A 62 962 49 HOH HOH . 
F 5 HOH A 63 963 50 HOH HOH . 
F 5 HOH A 64 964 52 HOH HOH . 
F 5 HOH A 65 965 53 HOH HOH . 
F 5 HOH A 66 966 54 HOH HOH . 
F 5 HOH A 67 967 55 HOH HOH . 
F 5 HOH A 68 968 56 HOH HOH . 
F 5 HOH A 69 969 57 HOH HOH . 
F 5 HOH A 70 970 58 HOH HOH . 
F 5 HOH A 71 971 59 HOH HOH . 
F 5 HOH A 72 972 60 HOH HOH . 
F 5 HOH A 73 973 61 HOH HOH . 
F 5 HOH A 74 974 62 HOH HOH . 
F 5 HOH A 75 975 66 HOH HOH . 
F 5 HOH A 76 976 68 HOH HOH . 
F 5 HOH A 77 977 69 HOH HOH . 
F 5 HOH A 78 978 70 HOH HOH . 
F 5 HOH A 79 979 71 HOH HOH . 
F 5 HOH A 80 980 72 HOH HOH . 
F 5 HOH A 81 981 74 HOH HOH . 
F 5 HOH A 82 982 75 HOH HOH . 
F 5 HOH A 83 983 76 HOH HOH . 
F 5 HOH A 84 984 77 HOH HOH . 
F 5 HOH A 85 985 78 HOH HOH . 
F 5 HOH A 86 986 79 HOH HOH . 
F 5 HOH A 87 987 80 HOH HOH . 
F 5 HOH A 88 988 81 HOH HOH . 
F 5 HOH A 89 989 82 HOH HOH . 
F 5 HOH A 90 990 83 HOH HOH . 
F 5 HOH A 91 991 85 HOH HOH . 
F 5 HOH A 92 992 87 HOH HOH . 
F 5 HOH A 93 993 88 HOH HOH . 
F 5 HOH A 94 994 89 HOH HOH . 
F 5 HOH A 95 995 90 HOH HOH . 
F 5 HOH A 96 996 91 HOH HOH . 
F 5 HOH A 97 997 92 HOH HOH . 
F 5 HOH A 98 998 93 HOH HOH . 
F 5 HOH A 99 999 94 HOH HOH . 
F 5 HOH A 100 1000 96 HOH HOH . 
F 5 HOH A 101 1001 97 HOH HOH . 
F 5 HOH A 102 1002 98 HOH HOH . 
F 5 HOH A 103 1003 99 HOH HOH . 
F 5 HOH A 104 1004 100 HOH HOH . 
F 5 HOH A 105 1005 101 HOH HOH . 
F 5 HOH A 106 1006 102 HOH HOH . 
F 5 HOH A 107 1007 104 HOH HOH . 
F 5 HOH A 108 1008 105 HOH HOH . 
F 5 HOH A 109 1009 108 HOH HOH . 
F 5 HOH A 110 1010 109 HOH HOH . 
F 5 HOH A 111 1011 110 HOH HOH . 
F 5 HOH A 112 1012 111 HOH HOH . 
F 5 HOH A 113 1013 113 HOH HOH . 
F 5 HOH A 114 1014 115 HOH HOH . 
F 5 HOH A 115 1015 116 HOH HOH . 
F 5 HOH A 116 1016 117 HOH HOH . 
F 5 HOH A 117 1017 119 HOH HOH . 
F 5 HOH A 118 1018 120 HOH HOH . 
F 5 HOH A 119 1019 1 HOH HOH . 
F 5 HOH A 120 1020 4 HOH HOH . 
F 5 HOH A 121 1021 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 15.163 44.859 34.086 1 66.62 ? C1 EDO 803 A 1 
HETATM 2 O O1 EDO . . . D 4 15.889 44.286 32.992 1 66.08 ? O1 EDO 803 A 1 
HETATM 3 C C2 EDO . . . D 4 14.967 43.797 35.161 1 61.53 ? C2 EDO 803 A 1 
HETATM 4 O O2 EDO . . . D 4 16.241 43.229 35.487 1 56.19 ? O2 EDO 803 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#