data_4XNE # _model_server_result.job_id rq5puXicJX4iYoyvkGG7rQ _model_server_result.datetime_utc '2024-11-23 20:55:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4XNE # _exptl.entry_id 4XNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.191 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-phenyl-1H-1,2,4-triazole-3,5-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.13 _cell.angle_gamma 90 _cell.entry_id 4XNE _cell.length_a 49.15 _cell.length_b 71.56 _cell.length_c 60.94 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 150 A THR 158 1_555 A N CME 151 A CME 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C CME 151 A CME 159 1_555 A N ASP 152 A ASP 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C ASN 243 A ASN 251 1_555 A N CME 244 A CME 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C CME 244 A CME 252 1_555 A N ILE 245 A ILE 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C8 H9 N5' _chem_comp.formula_weight 175.191 _chem_comp.id TT4 _chem_comp.mon_nstd_flag . _chem_comp.name 1-phenyl-1H-1,2,4-triazole-3,5-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CAJ TT4 sing 359 n n CAJ NAI TT4 doub 360 n y CAJ NAH TT4 sing 361 n y NAI NAM TT4 sing 362 n y CAF CAD TT4 doub 363 n y CAF CAK TT4 sing 364 n y NAM CAK TT4 sing 365 n n NAM CAL TT4 sing 366 n y NAH CAL TT4 doub 367 n y CAD CAC TT4 sing 368 n y CAK CAG TT4 doub 369 n y CAL NAB TT4 sing 370 n n CAC CAE TT4 doub 371 n y CAG CAE TT4 sing 372 n y CAF H1 TT4 sing 373 n n CAD H2 TT4 sing 374 n n CAC H3 TT4 sing 375 n n CAE H4 TT4 sing 376 n n CAG H5 TT4 sing 377 n n NAA H6 TT4 sing 378 n n NAA H7 TT4 sing 379 n n NAB H8 TT4 sing 380 n n NAB H9 TT4 sing 381 n n # _atom_sites.entry_id 4XNE _atom_sites.fract_transf_matrix[1][1] 0.020346 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007058 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TT4 A 1 401 1 TT4 TT4 . C 3 SO4 A 1 402 1 SO4 SO4 . D 4 HOH A 1 501 96 HOH HOH . D 4 HOH A 2 502 57 HOH HOH . D 4 HOH A 3 503 78 HOH HOH . D 4 HOH A 4 504 33 HOH HOH . D 4 HOH A 5 505 73 HOH HOH . D 4 HOH A 6 506 106 HOH HOH . D 4 HOH A 7 507 12 HOH HOH . D 4 HOH A 8 508 4 HOH HOH . D 4 HOH A 9 509 85 HOH HOH . D 4 HOH A 10 510 54 HOH HOH . D 4 HOH A 11 511 55 HOH HOH . D 4 HOH A 12 512 75 HOH HOH . D 4 HOH A 13 513 98 HOH HOH . D 4 HOH A 14 514 19 HOH HOH . D 4 HOH A 15 515 76 HOH HOH . D 4 HOH A 16 516 53 HOH HOH . D 4 HOH A 17 517 88 HOH HOH . D 4 HOH A 18 518 107 HOH HOH . D 4 HOH A 19 519 36 HOH HOH . D 4 HOH A 20 520 91 HOH HOH . D 4 HOH A 21 521 95 HOH HOH . D 4 HOH A 22 522 63 HOH HOH . D 4 HOH A 23 523 7 HOH HOH . D 4 HOH A 24 524 9 HOH HOH . D 4 HOH A 25 525 40 HOH HOH . D 4 HOH A 26 526 5 HOH HOH . D 4 HOH A 27 527 34 HOH HOH . D 4 HOH A 28 528 86 HOH HOH . D 4 HOH A 29 529 64 HOH HOH . D 4 HOH A 30 530 62 HOH HOH . D 4 HOH A 31 531 3 HOH HOH . D 4 HOH A 32 532 110 HOH HOH . D 4 HOH A 33 533 84 HOH HOH . D 4 HOH A 34 534 90 HOH HOH . D 4 HOH A 35 535 2 HOH HOH . D 4 HOH A 36 536 120 HOH HOH . D 4 HOH A 37 537 1 HOH HOH . D 4 HOH A 38 538 2 HOH HOH . D 4 HOH A 39 539 4 HOH HOH . D 4 HOH A 40 540 5 HOH HOH . D 4 HOH A 41 541 6 HOH HOH . D 4 HOH A 42 542 7 HOH HOH . D 4 HOH A 43 543 8 HOH HOH . D 4 HOH A 44 544 10 HOH HOH . D 4 HOH A 45 545 13 HOH HOH . D 4 HOH A 46 546 14 HOH HOH . D 4 HOH A 47 547 15 HOH HOH . D 4 HOH A 48 548 17 HOH HOH . D 4 HOH A 49 549 18 HOH HOH . D 4 HOH A 50 550 21 HOH HOH . D 4 HOH A 51 551 22 HOH HOH . D 4 HOH A 52 552 23 HOH HOH . D 4 HOH A 53 553 24 HOH HOH . D 4 HOH A 54 554 25 HOH HOH . D 4 HOH A 55 555 26 HOH HOH . D 4 HOH A 56 556 27 HOH HOH . D 4 HOH A 57 557 28 HOH HOH . D 4 HOH A 58 558 29 HOH HOH . D 4 HOH A 59 559 30 HOH HOH . D 4 HOH A 60 560 31 HOH HOH . D 4 HOH A 61 561 32 HOH HOH . D 4 HOH A 62 562 35 HOH HOH . D 4 HOH A 63 563 37 HOH HOH . D 4 HOH A 64 564 38 HOH HOH . D 4 HOH A 65 565 39 HOH HOH . D 4 HOH A 66 566 41 HOH HOH . D 4 HOH A 67 567 42 HOH HOH . D 4 HOH A 68 568 44 HOH HOH . D 4 HOH A 69 569 46 HOH HOH . D 4 HOH A 70 570 47 HOH HOH . D 4 HOH A 71 571 48 HOH HOH . D 4 HOH A 72 572 49 HOH HOH . D 4 HOH A 73 573 50 HOH HOH . D 4 HOH A 74 574 51 HOH HOH . D 4 HOH A 75 575 52 HOH HOH . D 4 HOH A 76 576 56 HOH HOH . D 4 HOH A 77 577 58 HOH HOH . D 4 HOH A 78 578 59 HOH HOH . D 4 HOH A 79 579 60 HOH HOH . D 4 HOH A 80 580 61 HOH HOH . D 4 HOH A 81 581 65 HOH HOH . D 4 HOH A 82 582 66 HOH HOH . D 4 HOH A 83 583 67 HOH HOH . D 4 HOH A 84 584 68 HOH HOH . D 4 HOH A 85 585 69 HOH HOH . D 4 HOH A 86 586 70 HOH HOH . D 4 HOH A 87 587 71 HOH HOH . D 4 HOH A 88 588 72 HOH HOH . D 4 HOH A 89 589 74 HOH HOH . D 4 HOH A 90 590 77 HOH HOH . D 4 HOH A 91 591 79 HOH HOH . D 4 HOH A 92 592 80 HOH HOH . D 4 HOH A 93 593 81 HOH HOH . D 4 HOH A 94 594 82 HOH HOH . D 4 HOH A 95 595 83 HOH HOH . D 4 HOH A 96 596 87 HOH HOH . D 4 HOH A 97 597 89 HOH HOH . D 4 HOH A 98 598 92 HOH HOH . D 4 HOH A 99 599 93 HOH HOH . D 4 HOH A 100 600 94 HOH HOH . D 4 HOH A 101 601 97 HOH HOH . D 4 HOH A 102 602 99 HOH HOH . D 4 HOH A 103 603 100 HOH HOH . D 4 HOH A 104 604 101 HOH HOH . D 4 HOH A 105 605 102 HOH HOH . D 4 HOH A 106 606 103 HOH HOH . D 4 HOH A 107 607 104 HOH HOH . D 4 HOH A 108 608 105 HOH HOH . D 4 HOH A 109 609 108 HOH HOH . D 4 HOH A 110 610 109 HOH HOH . D 4 HOH A 111 611 111 HOH HOH . D 4 HOH A 112 612 112 HOH HOH . D 4 HOH A 113 613 113 HOH HOH . D 4 HOH A 114 614 114 HOH HOH . D 4 HOH A 115 615 115 HOH HOH . D 4 HOH A 116 616 116 HOH HOH . D 4 HOH A 117 617 117 HOH HOH . D 4 HOH A 118 618 118 HOH HOH . D 4 HOH A 119 619 119 HOH HOH . D 4 HOH A 120 620 1 HOH HOH . D 4 HOH A 121 621 3 HOH HOH . D 4 HOH A 122 622 6 HOH HOH . D 4 HOH A 123 623 9 HOH HOH . D 4 HOH A 124 624 10 HOH HOH . D 4 HOH A 125 625 11 HOH HOH . D 4 HOH A 126 626 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAF TT4 . . . B 2 -16.206 15.869 41.99 1 41.41 ? CAF TT4 401 A 1 HETATM 2 C CAD TT4 . . . B 2 -15.441 17.025 42.151 1 42.88 ? CAD TT4 401 A 1 HETATM 3 C CAC TT4 . . . B 2 -14.1 16.946 42.502 1 43.52 ? CAC TT4 401 A 1 HETATM 4 C CAE TT4 . . . B 2 -13.51 15.7 42.706 1 44.26 ? CAE TT4 401 A 1 HETATM 5 C CAG TT4 . . . B 2 -14.262 14.539 42.55 1 42.15 ? CAG TT4 401 A 1 HETATM 6 C CAK TT4 . . . B 2 -15.619 14.617 42.207 1 40.5 ? CAK TT4 401 A 1 HETATM 7 N NAM TT4 . . . B 2 -16.314 13.486 42.042 1 37.16 ? NAM TT4 401 A 1 HETATM 8 N NAI TT4 . . . B 2 -15.875 12.527 41.515 1 33.64 ? NAI TT4 401 A 1 HETATM 9 C CAJ TT4 . . . B 2 -16.782 11.571 41.498 1 31.99 ? CAJ TT4 401 A 1 HETATM 10 N NAA TT4 . . . B 2 -16.585 10.375 40.978 1 30.11 ? NAA TT4 401 A 1 HETATM 11 N NAH TT4 . . . B 2 -17.897 11.993 42.069 1 33.73 ? NAH TT4 401 A 1 HETATM 12 C CAL TT4 . . . B 2 -17.563 13.222 42.425 1 35.26 ? CAL TT4 401 A 1 HETATM 13 N NAB TT4 . . . B 2 -18.367 14.07 43.051 1 37.89 ? NAB TT4 401 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #