data_4XNV # _model_server_result.job_id RjJqVIpXHpovvN8Q74aOtw _model_server_result.datetime_utc '2024-11-21 13:59:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xnv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1102}' # _entry.id 4XNV # _exptl.entry_id 4XNV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XNV _cell.length_a 66.27 _cell.length_b 66.27 _cell.length_c 239.07 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XNV _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 41 A CYS 42 1_555 A SG CYS 344 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 123 A CYS 124 1_555 A SG CYS 201 A CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A SG CYS 252 A CYS 1006 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc2 A SG CYS 255 A CYS 1009 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 A SG CYS 285 A CYS 1039 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc4 A SG CYS 288 A CYS 1042 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 163 n n C1 C10 CLR sing 164 n n C1 H11 CLR sing 165 n n C1 H12 CLR sing 166 n n C2 C3 CLR sing 167 n n C2 H21 CLR sing 168 n n C2 H22 CLR sing 169 n n C3 C4 CLR sing 170 n n C3 O1 CLR sing 171 n n C3 H3 CLR sing 172 n n C4 C5 CLR sing 173 n n C4 H41 CLR sing 174 n n C4 H42 CLR sing 175 n n C5 C6 CLR doub 176 n n C5 C10 CLR sing 177 n n C6 C7 CLR sing 178 n n C6 H6 CLR sing 179 n n C7 C8 CLR sing 180 n n C7 H71 CLR sing 181 n n C7 H72 CLR sing 182 n n C8 C9 CLR sing 183 n n C8 C14 CLR sing 184 n n C8 H8 CLR sing 185 n n C9 C10 CLR sing 186 n n C9 C11 CLR sing 187 n n C9 H9 CLR sing 188 n n C10 C19 CLR sing 189 n n C11 C12 CLR sing 190 n n C11 H111 CLR sing 191 n n C11 H112 CLR sing 192 n n C12 C13 CLR sing 193 n n C12 H121 CLR sing 194 n n C12 H122 CLR sing 195 n n C13 C14 CLR sing 196 n n C13 C17 CLR sing 197 n n C13 C18 CLR sing 198 n n C14 C15 CLR sing 199 n n C14 H14 CLR sing 200 n n C15 C16 CLR sing 201 n n C15 H151 CLR sing 202 n n C15 H152 CLR sing 203 n n C16 C17 CLR sing 204 n n C16 H161 CLR sing 205 n n C16 H162 CLR sing 206 n n C17 C20 CLR sing 207 n n C17 H17 CLR sing 208 n n C18 H181 CLR sing 209 n n C18 H182 CLR sing 210 n n C18 H183 CLR sing 211 n n C19 H191 CLR sing 212 n n C19 H192 CLR sing 213 n n C19 H193 CLR sing 214 n n C20 C21 CLR sing 215 n n C20 C22 CLR sing 216 n n C20 H20 CLR sing 217 n n C21 H211 CLR sing 218 n n C21 H212 CLR sing 219 n n C21 H213 CLR sing 220 n n C22 C23 CLR sing 221 n n C22 H221 CLR sing 222 n n C22 H222 CLR sing 223 n n C23 C24 CLR sing 224 n n C23 H231 CLR sing 225 n n C23 H232 CLR sing 226 n n C24 C25 CLR sing 227 n n C24 H241 CLR sing 228 n n C24 H242 CLR sing 229 n n C25 C26 CLR sing 230 n n C25 C27 CLR sing 231 n n C25 H25 CLR sing 232 n n C26 H261 CLR sing 233 n n C26 H262 CLR sing 234 n n C26 H263 CLR sing 235 n n C27 H271 CLR sing 236 n n C27 H272 CLR sing 237 n n C27 H273 CLR sing 238 n n O1 H1 CLR sing 239 n n # _atom_sites.entry_id 4XNV _atom_sites.fract_transf_matrix[1][1] 0.01509 _atom_sites.fract_transf_matrix[1][2] 0.008712 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017424 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BUR A 1 1101 1 BUR BUR . C 3 CLR A 1 1102 1 CLR CLR . D 4 Y01 A 1 1103 2 Y01 Y01 . E 4 Y01 A 1 1104 3 Y01 Y01 . F 4 Y01 A 1 1105 4 Y01 Y01 . G 5 OLC A 1 1106 5 OLC OLC . H 5 OLC A 1 1107 6 OLC OLC . I 5 OLC A 1 1108 7 OLC OLC . J 5 OLC A 1 1109 8 OLC OLC . K 5 OLC A 1 1110 10 OLC OLC . L 5 OLC A 1 1111 11 OLC OLC . M 5 OLC A 1 1112 12 OLC OLC . N 5 OLC A 1 1113 13 OLC OLC . O 6 1PE A 1 1114 200 1PE 1PE . P 7 ZN A 1 1115 1 ZN ZN . Q 8 HOH A 1 1201 108 HOH HOH . Q 8 HOH A 2 1202 102 HOH HOH . Q 8 HOH A 3 1203 105 HOH HOH . Q 8 HOH A 4 1204 116 HOH HOH . Q 8 HOH A 5 1205 115 HOH HOH . Q 8 HOH A 6 1206 7 HOH HOH . Q 8 HOH A 7 1207 119 HOH HOH . Q 8 HOH A 8 1208 125 HOH HOH . Q 8 HOH A 9 1209 123 HOH HOH . Q 8 HOH A 10 1210 4 HOH HOH . Q 8 HOH A 11 1211 118 HOH HOH . Q 8 HOH A 12 1212 124 HOH HOH . Q 8 HOH A 13 1213 120 HOH HOH . Q 8 HOH A 14 1214 3 HOH HOH . Q 8 HOH A 15 1215 109 HOH HOH . Q 8 HOH A 16 1216 117 HOH HOH . Q 8 HOH A 17 1217 10 HOH HOH . Q 8 HOH A 18 1218 112 HOH HOH . Q 8 HOH A 19 1219 114 HOH HOH . Q 8 HOH A 20 1220 106 HOH HOH . Q 8 HOH A 21 1221 103 HOH HOH . Q 8 HOH A 22 1222 9 HOH HOH . Q 8 HOH A 23 1223 121 HOH HOH . Q 8 HOH A 24 1224 104 HOH HOH . Q 8 HOH A 25 1225 2 HOH HOH . Q 8 HOH A 26 1226 8 HOH HOH . Q 8 HOH A 27 1227 1 HOH HOH . Q 8 HOH A 28 1228 5 HOH HOH . Q 8 HOH A 29 1229 107 HOH HOH . Q 8 HOH A 30 1230 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . C 3 8.534 17.784 0.156 1 36.2 ? C1 CLR 1102 A 1 HETATM 2 C C2 CLR . . . C 3 8.381 17.519 -1.367 1 36.02 ? C2 CLR 1102 A 1 HETATM 3 C C3 CLR . . . C 3 8.02 16.026 -1.634 1 35.5 ? C3 CLR 1102 A 1 HETATM 4 C C4 CLR . . . C 3 6.731 15.623 -0.867 1 34.91 ? C4 CLR 1102 A 1 HETATM 5 C C5 CLR . . . C 3 6.814 15.954 0.611 1 34.77 ? C5 CLR 1102 A 1 HETATM 6 C C6 CLR . . . C 3 6.474 14.976 1.49 1 32.81 ? C6 CLR 1102 A 1 HETATM 7 C C7 CLR . . . C 3 6.507 15.121 2.985 1 34.45 ? C7 CLR 1102 A 1 HETATM 8 C C8 CLR . . . C 3 6.684 16.588 3.48 1 35.99 ? C8 CLR 1102 A 1 HETATM 9 C C9 CLR . . . C 3 7.741 17.339 2.563 1 37.55 ? C9 CLR 1102 A 1 HETATM 10 C C10 CLR . . . C 3 7.279 17.383 1.033 1 36.69 ? C10 CLR 1102 A 1 HETATM 11 C C11 CLR . . . C 3 8.334 18.672 3.156 1 40.15 ? C11 CLR 1102 A 1 HETATM 12 C C12 CLR . . . C 3 8.585 18.678 4.7 1 40.81 ? C12 CLR 1102 A 1 HETATM 13 C C13 CLR . . . C 3 7.398 18.119 5.557 1 41.22 ? C13 CLR 1102 A 1 HETATM 14 C C14 CLR . . . C 3 7.11 16.654 4.988 1 38.68 ? C14 CLR 1102 A 1 HETATM 15 C C15 CLR . . . C 3 6.236 15.977 6.052 1 39.7 ? C15 CLR 1102 A 1 HETATM 16 C C16 CLR . . . C 3 6.791 16.525 7.373 1 39.39 ? C16 CLR 1102 A 1 HETATM 17 C C17 CLR . . . C 3 7.764 17.72 7.061 1 40.49 ? C17 CLR 1102 A 1 HETATM 18 C C18 CLR . . . C 3 6.181 19.118 5.5 1 42.6 ? C18 CLR 1102 A 1 HETATM 19 C C19 CLR . . . C 3 6.083 18.394 0.799 1 34.55 ? C19 CLR 1102 A 1 HETATM 20 C C20 CLR . . . C 3 7.843 18.778 8.239 1 40.9 ? C20 CLR 1102 A 1 HETATM 21 C C21 CLR . . . C 3 8.699 20.039 7.921 1 39.11 ? C21 CLR 1102 A 1 HETATM 22 C C22 CLR . . . C 3 8.44 18.143 9.542 1 45.79 ? C22 CLR 1102 A 1 HETATM 23 C C23 CLR . . . C 3 7.76 18.722 10.797 1 49.43 ? C23 CLR 1102 A 1 HETATM 24 C C24 CLR . . . C 3 8.208 18.003 12.093 1 52.02 ? C24 CLR 1102 A 1 HETATM 25 C C25 CLR . . . C 3 8.138 18.864 13.418 1 53.65 ? C25 CLR 1102 A 1 HETATM 26 C C26 CLR . . . C 3 9.417 19.675 13.679 1 53.25 ? C26 CLR 1102 A 1 HETATM 27 C C27 CLR . . . C 3 6.891 19.741 13.594 1 52.87 ? C27 CLR 1102 A 1 HETATM 28 O O1 CLR . . . C 3 7.803 15.927 -3.034 1 35.39 ? O1 CLR 1102 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #