data_4XNV
#
_model_server_result.job_id            Zaman0GMJD0Dqeq62lPO8w 
_model_server_result.datetime_utc      '2024-11-21 14:03:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xnv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":1114}' 
#
_entry.id    4XNV 
#
_exptl.entry_id    4XNV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4XNV 
_cell.length_a            66.27 
_cell.length_b            66.27 
_cell.length_c            239.07 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XNV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             O 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 41 A CYS 42 1_555 A SG CYS 344 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf2 A SG CYS 123 A CYS 124 1_555 A SG CYS 201 A CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A SG CYS 252 A CYS 1006 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? 
metalc ? metalc2 A SG CYS 255 A CYS 1009 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc3 A SG CYS 285 A CYS 1039 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? 
metalc ? metalc4 A SG CYS 288 A CYS 1042 1_555 P ZN ZN . A ZN 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 1PE sing 1 n n 
OH2 HO2 1PE sing 2 n n 
C12 C22 1PE sing 3 n n 
C12 H121 1PE sing 4 n n 
C12 H122 1PE sing 5 n n 
C22 OH3 1PE sing 6 n n 
C22 H221 1PE sing 7 n n 
C22 H222 1PE sing 8 n n 
OH3 C23 1PE sing 9 n n 
C13 C23 1PE sing 10 n n 
C13 OH4 1PE sing 11 n n 
C13 H131 1PE sing 12 n n 
C13 H132 1PE sing 13 n n 
C23 H231 1PE sing 14 n n 
C23 H232 1PE sing 15 n n 
OH4 C24 1PE sing 16 n n 
C14 C24 1PE sing 17 n n 
C14 OH5 1PE sing 18 n n 
C14 H141 1PE sing 19 n n 
C14 H142 1PE sing 20 n n 
C24 H241 1PE sing 21 n n 
C24 H242 1PE sing 22 n n 
OH5 C25 1PE sing 23 n n 
C15 C25 1PE sing 24 n n 
C15 OH6 1PE sing 25 n n 
C15 H151 1PE sing 26 n n 
C15 H152 1PE sing 27 n n 
C25 H251 1PE sing 28 n n 
C25 H252 1PE sing 29 n n 
OH6 C26 1PE sing 30 n n 
C16 C26 1PE sing 31 n n 
C16 OH7 1PE sing 32 n n 
C16 H161 1PE sing 33 n n 
C16 H162 1PE sing 34 n n 
C26 H261 1PE sing 35 n n 
C26 H262 1PE sing 36 n n 
OH7 HO7 1PE sing 37 n n 
#
_atom_sites.entry_id                     4XNV 
_atom_sites.fract_transf_matrix[1][1]    0.01509 
_atom_sites.fract_transf_matrix[1][2]    0.008712 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017424 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004183 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BUR A 1 1101 1 BUR BUR . 
C 3 CLR A 1 1102 1 CLR CLR . 
D 4 Y01 A 1 1103 2 Y01 Y01 . 
E 4 Y01 A 1 1104 3 Y01 Y01 . 
F 4 Y01 A 1 1105 4 Y01 Y01 . 
G 5 OLC A 1 1106 5 OLC OLC . 
H 5 OLC A 1 1107 6 OLC OLC . 
I 5 OLC A 1 1108 7 OLC OLC . 
J 5 OLC A 1 1109 8 OLC OLC . 
K 5 OLC A 1 1110 10 OLC OLC . 
L 5 OLC A 1 1111 11 OLC OLC . 
M 5 OLC A 1 1112 12 OLC OLC . 
N 5 OLC A 1 1113 13 OLC OLC . 
O 6 1PE A 1 1114 200 1PE 1PE . 
P 7 ZN A 1 1115 1 ZN ZN . 
Q 8 HOH A 1 1201 108 HOH HOH . 
Q 8 HOH A 2 1202 102 HOH HOH . 
Q 8 HOH A 3 1203 105 HOH HOH . 
Q 8 HOH A 4 1204 116 HOH HOH . 
Q 8 HOH A 5 1205 115 HOH HOH . 
Q 8 HOH A 6 1206 7 HOH HOH . 
Q 8 HOH A 7 1207 119 HOH HOH . 
Q 8 HOH A 8 1208 125 HOH HOH . 
Q 8 HOH A 9 1209 123 HOH HOH . 
Q 8 HOH A 10 1210 4 HOH HOH . 
Q 8 HOH A 11 1211 118 HOH HOH . 
Q 8 HOH A 12 1212 124 HOH HOH . 
Q 8 HOH A 13 1213 120 HOH HOH . 
Q 8 HOH A 14 1214 3 HOH HOH . 
Q 8 HOH A 15 1215 109 HOH HOH . 
Q 8 HOH A 16 1216 117 HOH HOH . 
Q 8 HOH A 17 1217 10 HOH HOH . 
Q 8 HOH A 18 1218 112 HOH HOH . 
Q 8 HOH A 19 1219 114 HOH HOH . 
Q 8 HOH A 20 1220 106 HOH HOH . 
Q 8 HOH A 21 1221 103 HOH HOH . 
Q 8 HOH A 22 1222 9 HOH HOH . 
Q 8 HOH A 23 1223 121 HOH HOH . 
Q 8 HOH A 24 1224 104 HOH HOH . 
Q 8 HOH A 25 1225 2 HOH HOH . 
Q 8 HOH A 26 1226 8 HOH HOH . 
Q 8 HOH A 27 1227 1 HOH HOH . 
Q 8 HOH A 28 1228 5 HOH HOH . 
Q 8 HOH A 29 1229 107 HOH HOH . 
Q 8 HOH A 30 1230 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . O 6 -19.026 37.07 0.018 1 84.59 ? OH2 1PE 1114 A 1 
HETATM 2 C C12 1PE . . . O 6 -20.333 36.662 0.418 1 85.02 ? C12 1PE 1114 A 1 
HETATM 3 C C22 1PE . . . O 6 -20.277 36.143 1.854 1 86.37 ? C22 1PE 1114 A 1 
HETATM 4 O OH3 1PE . . . O 6 -21.376 36.679 2.597 1 88.21 ? OH3 1PE 1114 A 1 
HETATM 5 C C13 1PE . . . O 6 -22.303 36.972 4.817 1 90.24 ? C13 1PE 1114 A 1 
HETATM 6 C C23 1PE . . . O 6 -21.372 36.144 3.924 1 89.39 ? C23 1PE 1114 A 1 
HETATM 7 O OH4 1PE . . . O 6 -23.63 36.435 4.775 1 91.23 ? OH4 1PE 1114 A 1 
HETATM 8 C C14 1PE . . . O 6 -25.256 36.61 2.982 1 92.1 ? C14 1PE 1114 A 1 
HETATM 9 C C24 1PE . . . O 6 -24.52 37.344 4.111 1 91.9 ? C24 1PE 1114 A 1 
HETATM 10 O OH5 1PE . . . O 6 -25.427 37.483 1.858 1 91.54 ? OH5 1PE 1114 A 1 
HETATM 11 C C15 1PE . . . O 6 -24.386 38.138 -0.214 1 89.49 ? C15 1PE 1114 A 1 
HETATM 12 C C25 1PE . . . O 6 -24.697 36.982 0.734 1 90.48 ? C25 1PE 1114 A 1 
HETATM 13 O OH6 1PE . . . O 6 -24.551 37.705 -1.565 1 88.35 ? OH6 1PE 1114 A 1 
HETATM 14 C C16 1PE . . . O 6 -24.244 38.587 -3.78 1 86.91 ? C16 1PE 1114 A 1 
HETATM 15 C C26 1PE . . . O 6 -24.818 38.839 -2.389 1 87.52 ? C26 1PE 1114 A 1 
HETATM 16 O OH7 1PE . . . O 6 -25.306 38.193 -4.65 1 86.26 ? OH7 1PE 1114 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#