data_4XNX # _model_server_result.job_id XtdTIwk8k9gwERXb2a4R1A _model_server_result.datetime_utc '2024-11-24 13:53:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xnx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":707}' # _entry.id 4XNX # _exptl.entry_id 4XNX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 313.391 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-[(R)-(2-ethoxyphenoxy)(phenyl)methyl]morpholine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XNX _cell.length_a 97.673 _cell.length_b 141.036 _cell.length_c 167.247 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XNX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D BGC 1 B 1 BGC A 701 N9S 4 n D GLC 2 B 2 GLC A 701 N9S # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 C SG CYS 41 H CYS 22 1_555 C SG CYS 115 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 C SG CYS 165 H CYS 146 1_555 C SG CYS 220 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 D O4 BGC . B BGC 1 1_555 D C1 GLC . B GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 sing metalc ? metalc1 A O GLY 18 A GLY 42 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc5 A O SER 255 A SER 320 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc6 A OG SER 255 A SER 320 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc8 A O LEU 352 A LEU 417 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc9 A OG SER 356 A SER 421 1_555 H NA NA . A NA 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc10 G NA NA . A NA 704 1_555 K O HOH . A HOH 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? # _chem_comp.formula 'C19 H23 N O3' _chem_comp.formula_weight 313.391 _chem_comp.id 41X _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-[(R)-(2-ethoxyphenoxy)(phenyl)methyl]morpholine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Reboxetine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C8 41X doub 1 n y C7 C6 41X sing 2 n y C8 C9 41X sing 3 n y C6 C5 41X doub 4 n y C9 C10 41X doub 5 n y C5 C10 41X sing 6 n y C5 O1 41X sing 7 n n C17 C18 41X doub 8 n y C17 C16 41X sing 9 n y C10 O2 41X sing 10 n n C18 C13 41X sing 11 n y C16 C15 41X doub 12 n y O1 C4 41X sing 13 n n C13 C4 41X sing 14 n n C13 C14 41X doub 15 n y C15 C14 41X sing 16 n y O2 C11 41X sing 17 n n C4 C 41X sing 18 n n C1 C 41X sing 19 n n C1 N 41X sing 20 n n C11 C12 41X sing 21 n n C O 41X sing 22 n n N C2 41X sing 23 n n O C3 41X sing 24 n n C2 C3 41X sing 25 n n C12 H1 41X sing 26 n n C12 H2 41X sing 27 n n C12 H3 41X sing 28 n n C11 H4 41X sing 29 n n C11 H5 41X sing 30 n n C9 H6 41X sing 31 n n C8 H7 41X sing 32 n n C7 H8 41X sing 33 n n C6 H9 41X sing 34 n n C4 H10 41X sing 35 n n C18 H11 41X sing 36 n n C17 H12 41X sing 37 n n C16 H13 41X sing 38 n n C15 H14 41X sing 39 n n C14 H15 41X sing 40 n n C H16 41X sing 41 n n C3 H17 41X sing 42 n n C3 H18 41X sing 43 n n C2 H19 41X sing 44 n n C2 H20 41X sing 45 n n N H21 41X sing 46 n n C1 H23 41X sing 47 n n C1 H24 41X sing 48 n n # _atom_sites.entry_id 4XNX _atom_sites.fract_transf_matrix[1][1] 0.010238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005979 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 CLR A 1 702 702 CLR CLR . F 5 CLR A 1 703 703 CLR CLR . G 6 NA A 1 704 704 NA NA . H 6 NA A 1 705 705 NA NA . I 7 CL A 1 706 706 CL CL . J 8 41X A 1 707 707 41X 41X . K 9 HOH A 1 801 801 HOH HOH . K 9 HOH A 2 802 802 HOH HOH . K 9 HOH A 3 803 803 HOH HOH . K 9 HOH A 4 804 804 HOH HOH . K 9 HOH A 5 805 805 HOH HOH . L 9 HOH L 1 301 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 41X . . . J 8 -13.547 -2.784 29.124 1 102.27 ? C12 41X 707 A 1 HETATM 2 C C11 41X . . . J 8 -12.777 -3.962 28.551 1 99.41 ? C11 41X 707 A 1 HETATM 3 O O2 41X . . . J 8 -11.483 -3.551 28.106 1 96.47 ? O2 41X 707 A 1 HETATM 4 C C10 41X . . . J 8 -11.152 -3.642 26.781 1 101.94 ? C10 41X 707 A 1 HETATM 5 C C9 41X . . . J 8 -12.149 -3.899 25.848 1 106.5 ? C9 41X 707 A 1 HETATM 6 C C8 41X . . . J 8 -11.838 -3.996 24.489 1 107.1 ? C8 41X 707 A 1 HETATM 7 C C7 41X . . . J 8 -10.517 -3.832 24.056 1 98.43 ? C7 41X 707 A 1 HETATM 8 C C6 41X . . . J 8 -9.526 -3.57 25.002 1 103.62 ? C6 41X 707 A 1 HETATM 9 C C5 41X . . . J 8 -9.84 -3.47 26.358 1 104.16 ? C5 41X 707 A 1 HETATM 10 O O1 41X . . . J 8 -8.814 -3.218 27.24 1 131.31 ? O1 41X 707 A 1 HETATM 11 C C4 41X . . . J 8 -8.91 -2.321 28.354 1 101.32 ? C4 41X 707 A 1 HETATM 12 C C13 41X . . . J 8 -9.259 -0.951 27.906 1 104.54 ? C13 41X 707 A 1 HETATM 13 C C18 41X . . . J 8 -8.462 -0.314 26.956 1 101.43 ? C18 41X 707 A 1 HETATM 14 C C17 41X . . . J 8 -8.811 0.967 26.531 1 94.17 ? C17 41X 707 A 1 HETATM 15 C C16 41X . . . J 8 -9.944 1.61 27.046 1 91.66 ? C16 41X 707 A 1 HETATM 16 C C15 41X . . . J 8 -10.743 0.964 27.998 1 87.56 ? C15 41X 707 A 1 HETATM 17 C C14 41X . . . J 8 -10.403 -0.323 28.428 1 103.12 ? C14 41X 707 A 1 HETATM 18 C C 41X . . . J 8 -7.607 -2.413 29.148 1 93.72 ? C 41X 707 A 1 HETATM 19 O O 41X . . . J 8 -7.583 -1.553 30.276 1 93.44 ? O 41X 707 A 1 HETATM 20 C C3 41X . . . J 8 -6.677 -2.161 31.207 1 96.11 ? C3 41X 707 A 1 HETATM 21 C C2 41X . . . J 8 -5.272 -2.263 30.582 1 96.33 ? C2 41X 707 A 1 HETATM 22 N N 41X . . . J 8 -5.276 -2.792 29.19 1 97.68 ? N 41X 707 A 1 HETATM 23 C C1 41X . . . J 8 -6.329 -2.161 28.363 1 93.18 ? C1 41X 707 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 449 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 23 #