data_4XOK # _model_server_result.job_id eyS7MmrXxmJ9J4f6EHZTUw _model_server_result.datetime_utc '2024-10-28 02:23:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":102}' # _entry.id 4XOK # _exptl.entry_id 4XOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XOK _cell.length_a 43.724 _cell.length_b 50.364 _cell.length_c 93.458 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,J 1 1 B,F,G,K 2 1 C,H,I,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N MET 1 A MET 1 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc2 A OE1 GLU 16 A GLU 16 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc3 A OD1 ASP 21 A ASP 21 1_555 E ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc4 A OD2 ASP 21 A ASP 21 1_555 E ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc5 A OE2 GLU 51 A GLU 51 1_555 I ZN ZN . C ZN 102 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc6 A NE2 HIS 68 A HIS 68 1_555 F ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc7 D ZN ZN . A ZN 101 3_444 B OE1 GLU 51 B GLU 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc8 E ZN ZN . A ZN 102 1_555 J O HOH . A HOH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc9 E ZN ZN . A ZN 102 2_454 B OE1 GLU 18 B GLU 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc10 E ZN ZN . A ZN 102 2_454 B OE2 GLU 18 B GLU 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc11 J O HOH . A HOH 223 1_555 F ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc12 B N MET 1 B MET 1 1_555 G ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc13 B NZ LYS 6 B LYS 6 1_555 F ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc14 B OE2 GLU 16 B GLU 16 1_555 G ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc15 B OD1 ASP 21 B ASP 21 1_555 H ZN ZN . C ZN 101 2_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc16 B NE2 HIS 68 B HIS 68 1_555 F ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc17 G ZN ZN . B ZN 102 3_554 C OE2 GLU 51 C GLU 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc18 K O HOH . B HOH 204 2_455 I ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc19 K O HOH . B HOH 210 2_455 H ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc20 C N MET 1 C MET 1 1_555 I ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc21 C OE1 GLU 16 C GLU 16 1_555 I ZN ZN . C ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc22 C OE1 GLU 18 C GLU 18 1_555 H ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc23 C OE2 GLU 18 C GLU 18 1_555 H ZN ZN . C ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XOK _atom_sites.fract_transf_matrix[1][1] 0.022871 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0107 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 101 1 ZN ZN . E 2 ZN A 1 102 2 ZN ZN . F 2 ZN B 1 101 4 ZN ZN . G 2 ZN B 1 102 5 ZN ZN . H 2 ZN C 1 101 3 ZN ZN . I 2 ZN C 1 102 6 ZN ZN . J 3 HOH A 1 201 56 HOH HOH . J 3 HOH A 2 202 15 HOH HOH . J 3 HOH A 3 203 27 HOH HOH . J 3 HOH A 4 204 52 HOH HOH . J 3 HOH A 5 205 40 HOH HOH . J 3 HOH A 6 206 34 HOH HOH . J 3 HOH A 7 207 32 HOH HOH . J 3 HOH A 8 208 65 HOH HOH . J 3 HOH A 9 209 23 HOH HOH . J 3 HOH A 10 210 75 HOH HOH . J 3 HOH A 11 211 16 HOH HOH . J 3 HOH A 12 212 55 HOH HOH . J 3 HOH A 13 213 59 HOH HOH . J 3 HOH A 14 214 3 HOH HOH . J 3 HOH A 15 215 80 HOH HOH . J 3 HOH A 16 216 1 HOH HOH . J 3 HOH A 17 217 36 HOH HOH . J 3 HOH A 18 218 9 HOH HOH . J 3 HOH A 19 219 37 HOH HOH . J 3 HOH A 20 220 46 HOH HOH . J 3 HOH A 21 221 76 HOH HOH . J 3 HOH A 22 222 74 HOH HOH . J 3 HOH A 23 223 5 HOH HOH . J 3 HOH A 24 224 8 HOH HOH . J 3 HOH A 25 225 13 HOH HOH . J 3 HOH A 26 226 18 HOH HOH . J 3 HOH A 27 227 31 HOH HOH . J 3 HOH A 28 228 35 HOH HOH . J 3 HOH A 29 229 41 HOH HOH . J 3 HOH A 30 230 51 HOH HOH . J 3 HOH A 31 231 54 HOH HOH . J 3 HOH A 32 232 64 HOH HOH . J 3 HOH A 33 233 69 HOH HOH . J 3 HOH A 34 234 70 HOH HOH . J 3 HOH A 35 235 72 HOH HOH . J 3 HOH A 36 236 73 HOH HOH . J 3 HOH A 37 237 78 HOH HOH . J 3 HOH A 38 238 82 HOH HOH . K 3 HOH B 1 201 10 HOH HOH . K 3 HOH B 2 202 57 HOH HOH . K 3 HOH B 3 203 6 HOH HOH . K 3 HOH B 4 204 44 HOH HOH . K 3 HOH B 5 205 66 HOH HOH . K 3 HOH B 6 206 42 HOH HOH . K 3 HOH B 7 207 68 HOH HOH . K 3 HOH B 8 208 62 HOH HOH . K 3 HOH B 9 209 24 HOH HOH . K 3 HOH B 10 210 29 HOH HOH . K 3 HOH B 11 211 14 HOH HOH . K 3 HOH B 12 212 47 HOH HOH . K 3 HOH B 13 213 33 HOH HOH . K 3 HOH B 14 214 61 HOH HOH . K 3 HOH B 15 215 7 HOH HOH . K 3 HOH B 16 216 58 HOH HOH . K 3 HOH B 17 217 4 HOH HOH . K 3 HOH B 18 218 17 HOH HOH . K 3 HOH B 19 219 22 HOH HOH . K 3 HOH B 20 220 25 HOH HOH . K 3 HOH B 21 221 28 HOH HOH . K 3 HOH B 22 222 49 HOH HOH . K 3 HOH B 23 223 53 HOH HOH . K 3 HOH B 24 224 63 HOH HOH . K 3 HOH B 25 225 79 HOH HOH . K 3 HOH B 26 226 81 HOH HOH . L 3 HOH C 1 201 38 HOH HOH . L 3 HOH C 2 202 26 HOH HOH . L 3 HOH C 3 203 2 HOH HOH . L 3 HOH C 4 204 77 HOH HOH . L 3 HOH C 5 205 20 HOH HOH . L 3 HOH C 6 206 30 HOH HOH . L 3 HOH C 7 207 45 HOH HOH . L 3 HOH C 8 208 71 HOH HOH . L 3 HOH C 9 209 43 HOH HOH . L 3 HOH C 10 210 50 HOH HOH . L 3 HOH C 11 211 60 HOH HOH . L 3 HOH C 12 212 67 HOH HOH . L 3 HOH C 13 213 21 HOH HOH . L 3 HOH C 14 214 11 HOH HOH . L 3 HOH C 15 215 12 HOH HOH . L 3 HOH C 16 216 19 HOH HOH . L 3 HOH C 17 217 39 HOH HOH . L 3 HOH C 18 218 48 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.148 _atom_site.Cartn_y -3.215 _atom_site.Cartn_z -43.477 _atom_site.occupancy 0.72 _atom_site.B_iso_or_equiv 41.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #