data_4XPD
#
_model_server_result.job_id            ZI8ciUnnKQLuG1sUm9yp1w 
_model_server_result.datetime_utc      '2024-11-05 04:03:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xpd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    4XPD 
#
_exptl.entry_id    4XPD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              809.571 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETYL COENZYME *A' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4XPD 
_cell.length_a            85.564 
_cell.length_b            113.649 
_cell.length_c            146.721 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XPD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            D 
_struct_conn.ptnr1_label_atom_id            N 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             1 
_struct_conn.ptnr1_auth_asym_id             F 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              1 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            G 
_struct_conn.ptnr2_label_atom_id            C2 
_struct_conn.ptnr2_label_comp_id            CMC 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             F 
_struct_conn.ptnr2_auth_comp_id             CMC 
_struct_conn.ptnr2_auth_seq_id              101 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.325 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C23 H38 N7 O17 P3 S' 
_chem_comp.formula_weight    809.571 
_chem_comp.id                ACO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETYL COENZYME *A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4XPD 
_atom_sites.fract_transf_matrix[1][1]    0.011687 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008799 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006816 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 G4P A 1 901 1 G4P G4P . 
F 6 ACO C 1 201 1 ACO BCO . 
G 7 CMC F 1 101 1 CMC ACO . 
H 8 HOH A 1 1001 1 HOH HOH . 
H 8 HOH A 2 1002 2 HOH HOH . 
H 8 HOH A 3 1003 3 HOH HOH . 
H 8 HOH A 4 1004 6 HOH HOH . 
H 8 HOH A 5 1005 7 HOH HOH . 
H 8 HOH A 6 1006 8 HOH HOH . 
H 8 HOH A 7 1007 9 HOH HOH . 
H 8 HOH A 8 1008 10 HOH HOH . 
H 8 HOH A 9 1009 11 HOH HOH . 
I 8 HOH B 1 301 4 HOH HOH . 
I 8 HOH B 2 302 5 HOH HOH . 
I 8 HOH B 3 303 12 HOH HOH . 
J 8 HOH C 1 301 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A ACO . . . F 6 55.28 -21.232 12.751 1 64.16 ? N1A ACO 201 C 1 
HETATM 2 C C2A ACO . . . F 6 55.818 -20.92 13.947 1 63.07 ? C2A ACO 201 C 1 
HETATM 3 N N3A ACO . . . F 6 56.708 -19.926 14.09 1 62.45 ? N3A ACO 201 C 1 
HETATM 4 C C4A ACO . . . F 6 57.113 -19.181 13.029 1 63.28 ? C4A ACO 201 C 1 
HETATM 5 C C5A ACO . . . F 6 56.571 -19.452 11.696 1 64.62 ? C5A ACO 201 C 1 
HETATM 6 C C6A ACO . . . F 6 55.595 -20.567 11.611 1 64.69 ? C6A ACO 201 C 1 
HETATM 7 N N6A ACO . . . F 6 55.027 -20.909 10.431 1 66.93 ? N6A ACO 201 C 1 
HETATM 8 N N7A ACO . . . F 6 57.153 -18.562 10.859 1 64.91 ? N7A ACO 201 C 1 
HETATM 9 C C8A ACO . . . F 6 57.997 -17.784 11.595 1 63.93 ? C8A ACO 201 C 1 
HETATM 10 N N9A ACO . . . F 6 57.963 -18.171 12.888 1 63.23 ? N9A ACO 201 C 1 
HETATM 11 C C1B ACO . . . F 6 58.679 -17.645 14.066 1 62.57 ? C1B ACO 201 C 1 
HETATM 12 C C2B ACO . . . F 6 59.24 -16.239 13.915 1 63.34 ? C2B ACO 201 C 1 
HETATM 13 O O2B ACO . . . F 6 60.674 -16.219 13.805 1 62.19 ? O2B ACO 201 C 1 
HETATM 14 C C3B ACO . . . F 6 58.723 -15.587 15.184 1 63.74 ? C3B ACO 201 C 1 
HETATM 15 O O3B ACO . . . F 6 59.642 -15.868 16.254 1 68.15 ? O3B ACO 201 C 1 
HETATM 16 P P3B ACO . . . F 6 59.353 -16.566 17.695 1 73.21 ? P3B ACO 201 C 1 
HETATM 17 O O7A ACO . . . F 6 60.697 -17.146 18.079 1 72.53 ? O7A ACO 201 C 1 
HETATM 18 O O8A ACO . . . F 6 58.308 -17.645 17.516 1 72.5 ? O8A ACO 201 C 1 
HETATM 19 O O9A ACO . . . F 6 58.909 -15.407 18.559 1 72.19 ? O9A ACO 201 C 1 
HETATM 20 C C4B ACO . . . F 6 57.36 -16.236 15.367 1 59.46 ? C4B ACO 201 C 1 
HETATM 21 O O4B ACO . . . F 6 57.678 -17.595 15.095 1 61.3 ? O4B ACO 201 C 1 
HETATM 22 C C5B ACO . . . F 6 56.259 -15.785 14.408 1 54.88 ? C5B ACO 201 C 1 
HETATM 23 O O5B ACO . . . F 6 56.24 -14.37 14.231 1 48.98 ? O5B ACO 201 C 1 
HETATM 24 P P1A ACO . . . F 6 55.598 -13.734 12.899 1 44.38 ? P1A ACO 201 C 1 
HETATM 25 O O1A ACO . . . F 6 54.707 -14.751 12.227 1 43.45 ? O1A ACO 201 C 1 
HETATM 26 O O2A ACO . . . F 6 56.699 -13.088 12.102 1 43.81 ? O2A ACO 201 C 1 
HETATM 27 O O3A ACO . . . F 6 54.695 -12.575 13.543 1 41.96 ? O3A ACO 201 C 1 
HETATM 28 P P2A ACO . . . F 6 53.109 -12.733 13.759 1 39.26 ? P2A ACO 201 C 1 
HETATM 29 O O4A ACO . . . F 6 52.421 -12.614 12.421 1 40.22 ? O4A ACO 201 C 1 
HETATM 30 O O5A ACO . . . F 6 52.834 -13.91 14.659 1 39.65 ? O5A ACO 201 C 1 
HETATM 31 O O6A ACO . . . F 6 52.818 -11.391 14.573 1 39.24 ? O6A ACO 201 C 1 
HETATM 32 C CBP ACO . . . F 6 52.827 -10.058 16.551 1 39.8 ? CBP ACO 201 C 1 
HETATM 33 C CCP ACO . . . F 6 53.59 -11.074 15.722 1 39.45 ? CCP ACO 201 C 1 
HETATM 34 C CDP ACO . . . F 6 53.532 -9.908 17.892 1 39.28 ? CDP ACO 201 C 1 
HETATM 35 C CEP ACO . . . F 6 52.825 -8.737 15.788 1 39.02 ? CEP ACO 201 C 1 
HETATM 36 C CAP ACO . . . F 6 51.388 -10.555 16.75 1 41.28 ? CAP ACO 201 C 1 
HETATM 37 O OAP ACO . . . F 6 51.406 -11.938 17.14 1 41.48 ? OAP ACO 201 C 1 
HETATM 38 C C9P ACO . . . F 6 50.652 -9.797 17.814 1 42.56 ? C9P ACO 201 C 1 
HETATM 39 O O9P ACO . . . F 6 50.51 -10.334 18.901 1 43.33 ? O9P ACO 201 C 1 
HETATM 40 N N8P ACO . . . F 6 50.177 -8.584 17.515 1 42.87 ? N8P ACO 201 C 1 
HETATM 41 C C7P ACO . . . F 6 49.4 -7.77 18.444 1 42.7 ? C7P ACO 201 C 1 
HETATM 42 C C6P ACO . . . F 6 49.89 -7.751 19.898 1 43.5 ? C6P ACO 201 C 1 
HETATM 43 C C5P ACO . . . F 6 50.559 -6.432 20.159 1 44.85 ? C5P ACO 201 C 1 
HETATM 44 O O5P ACO . . . F 6 50.053 -5.648 20.931 1 47.03 ? O5P ACO 201 C 1 
HETATM 45 N N4P ACO . . . F 6 51.626 -6.182 19.416 1 46.1 ? N4P ACO 201 C 1 
HETATM 46 C C3P ACO . . . F 6 52.109 -4.845 19.135 1 46.46 ? C3P ACO 201 C 1 
HETATM 47 C C2P ACO . . . F 6 52.516 -3.907 20.26 1 46.73 ? C2P ACO 201 C 1 
HETATM 48 S S1P ACO . . . F 6 52.183 -2.309 19.595 1 47.84 ? S1P ACO 201 C 1 
HETATM 49 C C ACO . . . F 6 53.055 -1.089 20.314 1 46.42 ? C ACO 201 C 1 
HETATM 50 O O ACO . . . F 6 53.986 -0.603 19.7 1 46.29 ? O ACO 201 C 1 
HETATM 51 C CH3 ACO . . . F 6 52.66 -0.605 21.676 1 46.33 ? CH3 ACO 201 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           51 
#