data_4XSK
#
_model_server_result.job_id            pkd7BvDn3ZVQ3PXAULSXsw 
_model_server_result.datetime_utc      '2024-11-07 02:42:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xsk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":305}' 
#
_entry.id    4XSK 
#
_exptl.entry_id    4XSK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4XSK 
_cell.length_a            121.025 
_cell.length_b            121.025 
_cell.length_c            42.774 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XSK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? 
disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4XSK 
_atom_sites.fract_transf_matrix[1][1]    0.008263 
_atom_sites.fract_transf_matrix[1][2]    0.004771 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009541 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023379 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 U 1 301 123 SO4 SO4 . 
C 2 SO4 U 1 302 124 SO4 SO4 . 
D 3 PGE U 1 303 125 PGE PG6 . 
E 3 PGE U 1 304 126 PGE PG6 . 
F 4 GOL U 1 305 127 GOL GOL . 
G 4 GOL U 1 306 128 GOL GOL . 
H 5 HOH U 1 401 100 HOH HOH . 
H 5 HOH U 2 402 51 HOH HOH . 
H 5 HOH U 3 403 62 HOH HOH . 
H 5 HOH U 4 404 60 HOH HOH . 
H 5 HOH U 5 405 108 HOH HOH . 
H 5 HOH U 6 406 54 HOH HOH . 
H 5 HOH U 7 407 80 HOH HOH . 
H 5 HOH U 8 408 87 HOH HOH . 
H 5 HOH U 9 409 41 HOH HOH . 
H 5 HOH U 10 410 57 HOH HOH . 
H 5 HOH U 11 411 56 HOH HOH . 
H 5 HOH U 12 412 73 HOH HOH . 
H 5 HOH U 13 413 71 HOH HOH . 
H 5 HOH U 14 414 49 HOH HOH . 
H 5 HOH U 15 415 81 HOH HOH . 
H 5 HOH U 16 416 15 HOH HOH . 
H 5 HOH U 17 417 52 HOH HOH . 
H 5 HOH U 18 418 22 HOH HOH . 
H 5 HOH U 19 419 93 HOH HOH . 
H 5 HOH U 20 420 10 HOH HOH . 
H 5 HOH U 21 421 25 HOH HOH . 
H 5 HOH U 22 422 28 HOH HOH . 
H 5 HOH U 23 423 13 HOH HOH . 
H 5 HOH U 24 424 12 HOH HOH . 
H 5 HOH U 25 425 14 HOH HOH . 
H 5 HOH U 26 426 65 HOH HOH . 
H 5 HOH U 27 427 106 HOH HOH . 
H 5 HOH U 28 428 26 HOH HOH . 
H 5 HOH U 29 429 101 HOH HOH . 
H 5 HOH U 30 430 102 HOH HOH . 
H 5 HOH U 31 431 33 HOH HOH . 
H 5 HOH U 32 432 37 HOH HOH . 
H 5 HOH U 33 433 3 HOH HOH . 
H 5 HOH U 34 434 4 HOH HOH . 
H 5 HOH U 35 435 55 HOH HOH . 
H 5 HOH U 36 436 82 HOH HOH . 
H 5 HOH U 37 437 42 HOH HOH . 
H 5 HOH U 38 438 69 HOH HOH . 
H 5 HOH U 39 439 43 HOH HOH . 
H 5 HOH U 40 440 77 HOH HOH . 
H 5 HOH U 41 441 5 HOH HOH . 
H 5 HOH U 42 442 18 HOH HOH . 
H 5 HOH U 43 443 21 HOH HOH . 
H 5 HOH U 44 444 2 HOH HOH . 
H 5 HOH U 45 445 92 HOH HOH . 
H 5 HOH U 46 446 88 HOH HOH . 
H 5 HOH U 47 447 44 HOH HOH . 
H 5 HOH U 48 448 113 HOH HOH . 
H 5 HOH U 49 449 9 HOH HOH . 
H 5 HOH U 50 450 1 HOH HOH . 
H 5 HOH U 51 451 40 HOH HOH . 
H 5 HOH U 52 452 48 HOH HOH . 
H 5 HOH U 53 453 74 HOH HOH . 
H 5 HOH U 54 454 39 HOH HOH . 
H 5 HOH U 55 455 19 HOH HOH . 
H 5 HOH U 56 456 58 HOH HOH . 
H 5 HOH U 57 457 91 HOH HOH . 
H 5 HOH U 58 458 53 HOH HOH . 
H 5 HOH U 59 459 23 HOH HOH . 
H 5 HOH U 60 460 78 HOH HOH . 
H 5 HOH U 61 461 38 HOH HOH . 
H 5 HOH U 62 462 29 HOH HOH . 
H 5 HOH U 63 463 31 HOH HOH . 
H 5 HOH U 64 464 27 HOH HOH . 
H 5 HOH U 65 465 11 HOH HOH . 
H 5 HOH U 66 466 45 HOH HOH . 
H 5 HOH U 67 467 66 HOH HOH . 
H 5 HOH U 68 468 24 HOH HOH . 
H 5 HOH U 69 469 59 HOH HOH . 
H 5 HOH U 70 470 16 HOH HOH . 
H 5 HOH U 71 471 114 HOH HOH . 
H 5 HOH U 72 472 118 HOH HOH . 
H 5 HOH U 73 473 89 HOH HOH . 
H 5 HOH U 74 474 110 HOH HOH . 
H 5 HOH U 75 475 8 HOH HOH . 
H 5 HOH U 76 476 117 HOH HOH . 
H 5 HOH U 77 477 85 HOH HOH . 
H 5 HOH U 78 478 34 HOH HOH . 
H 5 HOH U 79 479 94 HOH HOH . 
H 5 HOH U 80 480 95 HOH HOH . 
H 5 HOH U 81 481 96 HOH HOH . 
H 5 HOH U 82 482 20 HOH HOH . 
H 5 HOH U 83 483 86 HOH HOH . 
H 5 HOH U 84 484 116 HOH HOH . 
H 5 HOH U 85 485 46 HOH HOH . 
H 5 HOH U 86 486 30 HOH HOH . 
H 5 HOH U 87 487 32 HOH HOH . 
H 5 HOH U 88 488 99 HOH HOH . 
H 5 HOH U 89 489 6 HOH HOH . 
H 5 HOH U 90 490 68 HOH HOH . 
H 5 HOH U 91 491 36 HOH HOH . 
H 5 HOH U 92 492 121 HOH HOH . 
H 5 HOH U 93 493 70 HOH HOH . 
H 5 HOH U 94 494 83 HOH HOH . 
H 5 HOH U 95 495 105 HOH HOH . 
H 5 HOH U 96 496 67 HOH HOH . 
H 5 HOH U 97 497 64 HOH HOH . 
H 5 HOH U 98 498 90 HOH HOH . 
H 5 HOH U 99 499 17 HOH HOH . 
H 5 HOH U 100 500 107 HOH HOH . 
H 5 HOH U 101 501 75 HOH HOH . 
H 5 HOH U 102 502 111 HOH HOH . 
H 5 HOH U 103 503 98 HOH HOH . 
H 5 HOH U 104 504 63 HOH HOH . 
H 5 HOH U 105 505 97 HOH HOH . 
H 5 HOH U 106 506 109 HOH HOH . 
H 5 HOH U 107 507 76 HOH HOH . 
H 5 HOH U 108 508 104 HOH HOH . 
H 5 HOH U 109 509 47 HOH HOH . 
H 5 HOH U 110 510 35 HOH HOH . 
H 5 HOH U 111 511 61 HOH HOH . 
H 5 HOH U 112 512 50 HOH HOH . 
H 5 HOH U 113 513 120 HOH HOH . 
H 5 HOH U 114 514 72 HOH HOH . 
H 5 HOH U 115 515 115 HOH HOH . 
H 5 HOH U 116 516 79 HOH HOH . 
H 5 HOH U 117 517 103 HOH HOH . 
H 5 HOH U 118 518 112 HOH HOH . 
H 5 HOH U 119 519 84 HOH HOH . 
H 5 HOH U 120 520 122 HOH HOH . 
H 5 HOH U 121 521 119 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 -41.193 -5.301 -9.078 1 31.98 ? C1 GOL 305 U 1 
HETATM 2 O O1 GOL . . . F 4 -40.451 -6.579 -9.032 1 34.71 ? O1 GOL 305 U 1 
HETATM 3 C C2 GOL . . . F 4 -40.758 -4.302 -10.153 1 36.53 ? C2 GOL 305 U 1 
HETATM 4 O O2 GOL . . . F 4 -41.961 -3.837 -10.811 1 39.26 ? O2 GOL 305 U 1 
HETATM 5 C C3 GOL . . . F 4 -40.023 -3.012 -9.772 1 33.56 ? C3 GOL 305 U 1 
HETATM 6 O O3 GOL . . . F 4 -39.764 -2.291 -11.021 1 38.52 ? O3 GOL 305 U 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#