data_4XSN # _model_server_result.job_id 781xEPS80CMP9fTOQsahUw _model_server_result.datetime_utc '2024-11-24 17:58:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xsn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4XSN # _exptl.entry_id 4XSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XSN _cell.length_a 18.799 _cell.length_b 29.077 _cell.length_c 43.278 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DC 1 A DC 1 1_555 A P BGM 2 A BGM 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale2 A O3' BGM 2 A BGM 2 1_555 A P DC 3 A DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.612 ? covale ? covale3 B O3' DC 1 B DC 1 1_555 B P BGM 2 B BGM 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.573 ? covale ? covale4 B O3' BGM 2 B BGM 2 1_555 B P DC 3 B DC 3 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.593 ? covale ? covale5 B O3' BGM 2 B BGM 2 1_555 B P DC 3 B DC 3 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.595 ? metalc ? metalc1 B N7 DG 4 B DG 4 1_555 C CU CU . B CU 101 4_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc2 B O6 DG 4 B DG 4 1_555 C CU CU . B CU 101 4_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc3 B N7 DG 6 B DG 6 1_555 C CU CU . B CU 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc4 C CU CU . B CU 101 1_555 E O HOH . B HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc5 C CU CU . B CU 101 1_555 E O HOH . B HOH 211 4_466 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc6 C CU CU . B CU 101 1_555 E O HOH . B HOH 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 BGM 2 A BGM 2 1_555 B N3 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 BGM 2 A BGM 2 1_555 B O2 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 BGM 2 A BGM 2 1_555 B N4 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 4 B DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 4 B DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 4 B DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 A DG 4 1_555 B N3 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 A DG 4 1_555 B O2 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 A DG 4 1_555 B N4 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 DC 5 A DC 5 1_555 B N1 BGM 2 B BGM 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N4 DC 5 A DC 5 1_555 B O6 BGM 2 B BGM 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O2 DC 5 A DC 5 1_555 B N2 BGM 2 B BGM 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DG 6 A DG 6 1_555 B N3 DC 1 B DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N2 DG 6 A DG 6 1_555 B O2 DC 1 B DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O6 DG 6 A DG 6 1_555 B N4 DC 1 B DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XSN _atom_sites.fract_transf_matrix[1][1] 0.053194 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034391 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU B 1 101 1 CU CU . D 3 HOH A 1 101 168 HOH HOH . D 3 HOH A 2 102 164 HOH HOH . D 3 HOH A 3 103 172 HOH HOH . D 3 HOH A 4 104 166 HOH HOH . D 3 HOH A 5 105 130 HOH HOH . D 3 HOH A 6 106 134 HOH HOH . D 3 HOH A 7 107 144 HOH HOH . D 3 HOH A 8 108 162 HOH HOH . D 3 HOH A 9 109 176 HOH HOH . D 3 HOH A 10 110 106 HOH HOH . D 3 HOH A 11 111 160 HOH HOH . D 3 HOH A 12 112 187 HOH HOH . D 3 HOH A 13 113 109 HOH HOH . D 3 HOH A 14 114 107 HOH HOH . D 3 HOH A 15 115 120 HOH HOH . D 3 HOH A 16 116 127 HOH HOH . D 3 HOH A 17 117 192 HOH HOH . D 3 HOH A 18 118 112 HOH HOH . D 3 HOH A 19 119 104 HOH HOH . D 3 HOH A 20 120 159 HOH HOH . D 3 HOH A 21 121 105 HOH HOH . D 3 HOH A 22 122 108 HOH HOH . D 3 HOH A 23 123 114 HOH HOH . D 3 HOH A 24 124 118 HOH HOH . D 3 HOH A 25 125 126 HOH HOH . D 3 HOH A 26 126 177 HOH HOH . D 3 HOH A 27 127 157 HOH HOH . D 3 HOH A 28 128 116 HOH HOH . D 3 HOH A 29 129 163 HOH HOH . D 3 HOH A 30 130 156 HOH HOH . D 3 HOH A 31 131 178 HOH HOH . D 3 HOH A 32 132 195 HOH HOH . D 3 HOH A 33 133 165 HOH HOH . D 3 HOH A 34 134 190 HOH HOH . D 3 HOH A 35 135 139 HOH HOH . D 3 HOH A 36 136 196 HOH HOH . D 3 HOH A 37 137 198 HOH HOH . D 3 HOH A 38 138 182 HOH HOH . D 3 HOH A 39 139 175 HOH HOH . D 3 HOH A 40 140 194 HOH HOH . D 3 HOH A 41 141 140 HOH HOH . D 3 HOH A 42 142 122 HOH HOH . D 3 HOH A 43 143 128 HOH HOH . D 3 HOH A 44 144 129 HOH HOH . D 3 HOH A 45 145 131 HOH HOH . D 3 HOH A 46 146 145 HOH HOH . D 3 HOH A 47 147 146 HOH HOH . D 3 HOH A 48 148 151 HOH HOH . D 3 HOH A 49 149 153 HOH HOH . D 3 HOH A 50 150 179 HOH HOH . D 3 HOH A 51 151 185 HOH HOH . E 3 HOH B 1 201 110 HOH HOH . E 3 HOH B 2 202 188 HOH HOH . E 3 HOH B 3 203 189 HOH HOH . E 3 HOH B 4 204 135 HOH HOH . E 3 HOH B 5 205 117 HOH HOH . E 3 HOH B 6 206 124 HOH HOH . E 3 HOH B 7 207 111 HOH HOH . E 3 HOH B 8 208 102 HOH HOH . E 3 HOH B 9 209 137 HOH HOH . E 3 HOH B 10 210 115 HOH HOH . E 3 HOH B 11 211 100 HOH HOH . E 3 HOH B 12 212 138 HOH HOH . E 3 HOH B 13 213 101 HOH HOH . E 3 HOH B 14 214 136 HOH HOH . E 3 HOH B 15 215 197 HOH HOH . E 3 HOH B 16 216 171 HOH HOH . E 3 HOH B 17 217 147 HOH HOH . E 3 HOH B 18 218 161 HOH HOH . E 3 HOH B 19 219 148 HOH HOH . E 3 HOH B 20 220 186 HOH HOH . E 3 HOH B 21 221 155 HOH HOH . E 3 HOH B 22 222 193 HOH HOH . E 3 HOH B 23 223 167 HOH HOH . E 3 HOH B 24 224 141 HOH HOH . E 3 HOH B 25 225 158 HOH HOH . E 3 HOH B 26 226 149 HOH HOH . E 3 HOH B 27 227 119 HOH HOH . E 3 HOH B 28 228 121 HOH HOH . E 3 HOH B 29 229 133 HOH HOH . E 3 HOH B 30 230 173 HOH HOH . E 3 HOH B 31 231 181 HOH HOH . E 3 HOH B 32 232 125 HOH HOH . E 3 HOH B 33 233 170 HOH HOH . E 3 HOH B 34 234 180 HOH HOH . E 3 HOH B 35 235 183 HOH HOH . E 3 HOH B 36 236 154 HOH HOH . E 3 HOH B 37 237 174 HOH HOH . E 3 HOH B 38 238 123 HOH HOH . E 3 HOH B 39 239 103 HOH HOH . E 3 HOH B 40 240 113 HOH HOH . E 3 HOH B 41 241 132 HOH HOH . E 3 HOH B 42 242 142 HOH HOH . E 3 HOH B 43 243 143 HOH HOH . E 3 HOH B 44 244 152 HOH HOH . E 3 HOH B 45 245 169 HOH HOH . E 3 HOH B 46 246 184 HOH HOH . E 3 HOH B 47 247 199 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.171 _atom_site.Cartn_y 21.415 _atom_site.Cartn_z 17.608 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #