data_4XT1 # _model_server_result.job_id 1yGEiOI2C5jt1s9njUbNQQ _model_server_result.datetime_utc '2025-01-03 14:30:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xt1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 4XT1 # _exptl.entry_id 4XT1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XT1 _cell.length_a 81.024 _cell.length_b 81.024 _cell.length_c 231.303 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XT1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 23 1_555 A SG CYS 271 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 112 A CYS 104 1_555 A SG CYS 181 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 8 B CYS 8 1_555 B SG CYS 34 B CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 12 B CYS 12 1_555 B SG CYS 50 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 C SG CYS 26 C CYS 22 1_555 C SG CYS 99 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 B C PCA 1 B PCA 1 1_555 B N HIS 2 B HIS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 4XT1 _atom_sites.fract_transf_matrix[1][1] 0.012342 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012342 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CLR A 1 401 401 CLR CLR . E 4 CLR A 1 402 402 CLR CLR . F 5 OLC A 1 403 501 OLC OLC . G 5 OLC A 1 404 502 OLC OLC . H 5 OLC A 1 405 503 OLC OLC . I 5 OLC A 1 406 504 OLC OLC . J 5 OLC A 1 407 505 OLC OLC . K 5 OLC A 1 408 506 OLC OLC . L 6 UNL A 1 409 601 UNL UNL . M 6 UNL A 1 410 602 UNL UNL . N 6 UNL A 1 411 603 UNL UNL . O 6 UNL A 1 412 604 UNL UNL . P 6 UNL A 1 413 605 UNL UNL . Q 6 UNL A 1 414 606 UNL UNL . R 6 UNL A 1 415 607 UNL UNL . S 7 SIN A 1 416 701 SIN SIN . T 8 HOH A 1 501 810 HOH HOH . T 8 HOH A 2 502 801 HOH HOH . T 8 HOH A 3 503 802 HOH HOH . T 8 HOH A 4 504 803 HOH HOH . T 8 HOH A 5 505 805 HOH HOH . T 8 HOH A 6 506 807 HOH HOH . T 8 HOH A 7 507 808 HOH HOH . T 8 HOH A 8 508 809 HOH HOH . T 8 HOH A 9 509 811 HOH HOH . T 8 HOH A 10 510 813 HOH HOH . T 8 HOH A 11 511 814 HOH HOH . T 8 HOH A 12 512 815 HOH HOH . T 8 HOH A 13 513 816 HOH HOH . T 8 HOH A 14 514 817 HOH HOH . T 8 HOH A 15 515 818 HOH HOH . T 8 HOH A 16 516 819 HOH HOH . T 8 HOH A 17 517 820 HOH HOH . T 8 HOH A 18 518 821 HOH HOH . U 8 HOH B 1 101 804 HOH HOH . V 8 HOH C 1 201 806 HOH HOH . V 8 HOH C 2 202 812 HOH HOH . V 8 HOH C 3 203 201 HOH HOH . V 8 HOH C 4 204 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . D 4 114.69 30.275 223.322 1 100.48 ? C1 CLR 401 A 1 HETATM 2 C C2 CLR . . . D 4 114.791 30.719 221.867 1 104.64 ? C2 CLR 401 A 1 HETATM 3 C C3 CLR . . . D 4 113.47 31.375 221.454 1 89.34 ? C3 CLR 401 A 1 HETATM 4 C C4 CLR . . . D 4 113.264 32.626 222.316 1 78.82 ? C4 CLR 401 A 1 HETATM 5 C C5 CLR . . . D 4 113.283 32.251 223.76 1 88.5 ? C5 CLR 401 A 1 HETATM 6 C C6 CLR . . . D 4 112.322 32.713 224.54 1 97.67 ? C6 CLR 401 A 1 HETATM 7 C C7 CLR . . . D 4 112.245 32.409 225.986 1 102.59 ? C7 CLR 401 A 1 HETATM 8 C C8 CLR . . . D 4 113.643 32.121 226.518 1 104.87 ? C8 CLR 401 A 1 HETATM 9 C C9 CLR . . . D 4 114.315 31.014 225.694 1 99.29 ? C9 CLR 401 A 1 HETATM 10 C C10 CLR . . . D 4 114.493 31.495 224.234 1 98.33 ? C10 CLR 401 A 1 HETATM 11 C C11 CLR . . . D 4 115.668 30.607 226.292 1 104.26 ? C11 CLR 401 A 1 HETATM 12 C C12 CLR . . . D 4 115.587 30.263 227.776 1 93.67 ? C12 CLR 401 A 1 HETATM 13 C C13 CLR . . . D 4 114.968 31.433 228.541 1 99.32 ? C13 CLR 401 A 1 HETATM 14 C C14 CLR . . . D 4 113.555 31.657 227.962 1 111.83 ? C14 CLR 401 A 1 HETATM 15 C C15 CLR . . . D 4 112.944 32.622 228.963 1 120.49 ? C15 CLR 401 A 1 HETATM 16 C C16 CLR . . . D 4 113.391 32.035 230.307 1 115.86 ? C16 CLR 401 A 1 HETATM 17 C C17 CLR . . . D 4 114.654 31.179 230.036 1 99.5 ? C17 CLR 401 A 1 HETATM 18 C C18 CLR . . . D 4 115.808 32.721 228.392 1 101.47 ? C18 CLR 401 A 1 HETATM 19 C C19 CLR . . . D 4 115.709 32.424 224.126 1 104.99 ? C19 CLR 401 A 1 HETATM 20 C C20 CLR . . . D 4 115.806 31.549 230.99 1 101.86 ? C20 CLR 401 A 1 HETATM 21 C C21 CLR . . . D 4 116.829 30.413 231.073 1 112.48 ? C21 CLR 401 A 1 HETATM 22 C C22 CLR . . . D 4 115.255 31.892 232.383 1 102.74 ? C22 CLR 401 A 1 HETATM 23 C C23 CLR . . . D 4 116.31 31.617 233.45 1 106.84 ? C23 CLR 401 A 1 HETATM 24 C C24 CLR . . . D 4 115.654 31.068 234.707 1 95.44 ? C24 CLR 401 A 1 HETATM 25 C C25 CLR . . . D 4 114.99 32.201 235.489 1 93.51 ? C25 CLR 401 A 1 HETATM 26 C C26 CLR . . . D 4 114.26 31.622 236.69 1 84.57 ? C26 CLR 401 A 1 HETATM 27 C C27 CLR . . . D 4 116.043 33.205 235.944 1 103.85 ? C27 CLR 401 A 1 HETATM 28 O O1 CLR . . . D 4 113.59 31.728 220.113 1 93.7 ? O1 CLR 401 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #