data_4XT6
#
_model_server_result.job_id            EPB9PDeBsvMJnbrt-ixfag 
_model_server_result.datetime_utc      '2024-12-03 19:23:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xt6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    4XT6 
#
_exptl.entry_id    4XT6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              181.195 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6S)-2-amino-6-methyl-5,6,7,8-tetrahydropteridin-4(3H)-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4XT6 
_cell.length_a            70.428 
_cell.length_b            96.016 
_cell.length_c            76.107 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XT6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 70.428 0 38.0535 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C7 H11 N5 O' 
_chem_comp.formula_weight    181.195 
_chem_comp.id                44V 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6S)-2-amino-6-methyl-5,6,7,8-tetrahydropteridin-4(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N06 C01 44V sing 1 n n 
N06 C05 44V sing 2 n n 
C01 C02 44V sing 3 n n 
N07 C05 44V sing 4 n n 
N07 C08 44V doub 5 n n 
C05 C04 44V doub 6 n n 
N12 C08 44V sing 7 n n 
C08 N09 44V sing 8 n n 
C02 C13 44V sing 9 n n 
C02 N03 44V sing 10 n n 
C04 N03 44V sing 11 n n 
C04 C10 44V sing 12 n n 
N09 C10 44V sing 13 n n 
C10 O11 44V doub 14 n n 
C13 H1 44V sing 15 n n 
C13 H2 44V sing 16 n n 
C13 H3 44V sing 17 n n 
C01 H4 44V sing 18 n n 
C01 H5 44V sing 19 n n 
C02 H6 44V sing 20 n n 
N03 H7 44V sing 21 n n 
N06 H8 44V sing 22 n n 
N09 H9 44V sing 23 n n 
N12 H10 44V sing 24 n n 
N12 H11 44V sing 25 n n 
#
_atom_sites.entry_id                     4XT6 
_atom_sites.fract_transf_matrix[1][1]    0.014199 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010415 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 301 259 NAP NAP . 
C 3 44V A 1 302 260 44V THF . 
D 4 HOH A 1 401 15 HOH HOH . 
D 4 HOH A 2 402 33 HOH HOH . 
D 4 HOH A 3 403 39 HOH HOH . 
D 4 HOH A 4 404 37 HOH HOH . 
D 4 HOH A 5 405 19 HOH HOH . 
D 4 HOH A 6 406 67 HOH HOH . 
D 4 HOH A 7 407 16 HOH HOH . 
D 4 HOH A 8 408 66 HOH HOH . 
D 4 HOH A 9 409 14 HOH HOH . 
D 4 HOH A 10 410 54 HOH HOH . 
D 4 HOH A 11 411 35 HOH HOH . 
D 4 HOH A 12 412 46 HOH HOH . 
D 4 HOH A 13 413 65 HOH HOH . 
D 4 HOH A 14 414 44 HOH HOH . 
D 4 HOH A 15 415 17 HOH HOH . 
D 4 HOH A 16 416 36 HOH HOH . 
D 4 HOH A 17 417 18 HOH HOH . 
D 4 HOH A 18 418 31 HOH HOH . 
D 4 HOH A 19 419 13 HOH HOH . 
D 4 HOH A 20 420 9 HOH HOH . 
D 4 HOH A 21 421 6 HOH HOH . 
D 4 HOH A 22 422 45 HOH HOH . 
D 4 HOH A 23 423 51 HOH HOH . 
D 4 HOH A 24 424 80 HOH HOH . 
D 4 HOH A 25 425 72 HOH HOH . 
D 4 HOH A 26 426 89 HOH HOH . 
D 4 HOH A 27 427 55 HOH HOH . 
D 4 HOH A 28 428 1 HOH HOH . 
D 4 HOH A 29 429 2 HOH HOH . 
D 4 HOH A 30 430 3 HOH HOH . 
D 4 HOH A 31 431 4 HOH HOH . 
D 4 HOH A 32 432 5 HOH HOH . 
D 4 HOH A 33 433 7 HOH HOH . 
D 4 HOH A 34 434 10 HOH HOH . 
D 4 HOH A 35 435 11 HOH HOH . 
D 4 HOH A 36 436 12 HOH HOH . 
D 4 HOH A 37 437 23 HOH HOH . 
D 4 HOH A 38 438 24 HOH HOH . 
D 4 HOH A 39 439 25 HOH HOH . 
D 4 HOH A 40 440 26 HOH HOH . 
D 4 HOH A 41 441 27 HOH HOH . 
D 4 HOH A 42 442 28 HOH HOH . 
D 4 HOH A 43 443 29 HOH HOH . 
D 4 HOH A 44 444 32 HOH HOH . 
D 4 HOH A 45 445 34 HOH HOH . 
D 4 HOH A 46 446 38 HOH HOH . 
D 4 HOH A 47 447 40 HOH HOH . 
D 4 HOH A 48 448 42 HOH HOH . 
D 4 HOH A 49 449 47 HOH HOH . 
D 4 HOH A 50 450 50 HOH HOH . 
D 4 HOH A 51 451 52 HOH HOH . 
D 4 HOH A 52 452 53 HOH HOH . 
D 4 HOH A 53 453 57 HOH HOH . 
D 4 HOH A 54 454 59 HOH HOH . 
D 4 HOH A 55 455 60 HOH HOH . 
D 4 HOH A 56 456 61 HOH HOH . 
D 4 HOH A 57 457 62 HOH HOH . 
D 4 HOH A 58 458 63 HOH HOH . 
D 4 HOH A 59 459 69 HOH HOH . 
D 4 HOH A 60 460 70 HOH HOH . 
D 4 HOH A 61 461 74 HOH HOH . 
D 4 HOH A 62 462 76 HOH HOH . 
D 4 HOH A 63 463 82 HOH HOH . 
D 4 HOH A 64 464 83 HOH HOH . 
D 4 HOH A 65 465 84 HOH HOH . 
D 4 HOH A 66 466 85 HOH HOH . 
D 4 HOH A 67 467 86 HOH HOH . 
D 4 HOH A 68 468 87 HOH HOH . 
D 4 HOH A 69 469 88 HOH HOH . 
D 4 HOH A 70 470 90 HOH HOH . 
D 4 HOH A 71 471 91 HOH HOH . 
D 4 HOH A 72 472 92 HOH HOH . 
D 4 HOH A 73 473 93 HOH HOH . 
D 4 HOH A 74 474 94 HOH HOH . 
D 4 HOH A 75 475 95 HOH HOH . 
D 4 HOH A 76 476 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 44V . . . C 3 20.236 23.345 20.714 1 35.31 ? C13 44V 302 A 1 
HETATM 2 C C01 44V . . . C 3 21.048 24.844 19.224 1 34.7 ? C01 44V 302 A 1 
HETATM 3 C C02 44V . . . C 3 21.165 24.556 20.4 1 34.16 ? C02 44V 302 A 1 
HETATM 4 N N03 44V . . . C 3 20.844 25.7 21.349 1 33 ? N03 44V 302 A 1 
HETATM 5 C C04 44V . . . C 3 21.369 26.964 21.101 1 27.21 ? C04 44V 302 A 1 
HETATM 6 C C05 44V . . . C 3 21.825 27.226 19.656 1 23.42 ? C05 44V 302 A 1 
HETATM 7 N N06 44V . . . C 3 21.653 26.17 18.754 1 23.91 ? N06 44V 302 A 1 
HETATM 8 N N07 44V . . . C 3 22.372 28.5 19.312 1 23.4 ? N07 44V 302 A 1 
HETATM 9 C C08 44V . . . C 3 22.511 29.545 20.337 1 20.13 ? C08 44V 302 A 1 
HETATM 10 N N09 44V . . . C 3 22.074 29.281 21.738 1 21.08 ? N09 44V 302 A 1 
HETATM 11 C C10 44V . . . C 3 21.514 28.015 22.108 1 25.57 ? C10 44V 302 A 1 
HETATM 12 O O11 44V . . . C 3 21.163 27.834 23.262 1 30.35 ? O11 44V 302 A 1 
HETATM 13 N N12 44V . . . C 3 23.063 30.807 20.012 1 23.2 ? N12 44V 302 A 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           220 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           13 
#