data_4XTL # _model_server_result.job_id 4upsSrlrT821daemXS9v7g _model_server_result.datetime_utc '2024-11-04 22:32:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xtl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":335}' # _entry.id 4XTL # _exptl.entry_id 4XTL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 34 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XTL _cell.length_a 40.18 _cell.length_b 80.84 _cell.length_c 232.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XTL _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 254 A SER 254 1_555 A N LYR 255 A LYR 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C LYR 255 A LYR 255 1_555 A N VAL 256 A VAL 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A OH TYR 25 A TYR 25 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc2 A O THR 83 A THR 83 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc3 A O PHE 86 A PHE 86 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc4 B NA NA . A NA 301 1_555 MA O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc5 B NA NA . A NA 301 1_555 MA O HOH . A HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc6 B NA NA . A NA 301 1_555 MA O HOH . A HOH 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 194 n n C1 H11 LFA sing 195 n n C1 H12 LFA sing 196 n n C1 H13 LFA sing 197 n n C2 C3 LFA sing 198 n n C2 H21 LFA sing 199 n n C2 H22 LFA sing 200 n n C3 C4 LFA sing 201 n n C3 H31 LFA sing 202 n n C3 H32 LFA sing 203 n n C4 C5 LFA sing 204 n n C4 H41 LFA sing 205 n n C4 H42 LFA sing 206 n n C5 C6 LFA sing 207 n n C5 H51 LFA sing 208 n n C5 H52 LFA sing 209 n n C6 C7 LFA sing 210 n n C6 H61 LFA sing 211 n n C6 H62 LFA sing 212 n n C7 C8 LFA sing 213 n n C7 H71 LFA sing 214 n n C7 H72 LFA sing 215 n n C8 C9 LFA sing 216 n n C8 H81 LFA sing 217 n n C8 H82 LFA sing 218 n n C9 C10 LFA sing 219 n n C9 H91 LFA sing 220 n n C9 H92 LFA sing 221 n n C10 C11 LFA sing 222 n n C10 H101 LFA sing 223 n n C10 H102 LFA sing 224 n n C11 C12 LFA sing 225 n n C11 H111 LFA sing 226 n n C11 H112 LFA sing 227 n n C12 C13 LFA sing 228 n n C12 H121 LFA sing 229 n n C12 H122 LFA sing 230 n n C13 C14 LFA sing 231 n n C13 H131 LFA sing 232 n n C13 H132 LFA sing 233 n n C14 C15 LFA sing 234 n n C14 H141 LFA sing 235 n n C14 H142 LFA sing 236 n n C15 C16 LFA sing 237 n n C15 H151 LFA sing 238 n n C15 H152 LFA sing 239 n n C16 C17 LFA sing 240 n n C16 H161 LFA sing 241 n n C16 H162 LFA sing 242 n n C17 C18 LFA sing 243 n n C17 H171 LFA sing 244 n n C17 H172 LFA sing 245 n n C18 C19 LFA sing 246 n n C18 H181 LFA sing 247 n n C18 H182 LFA sing 248 n n C19 C20 LFA sing 249 n n C19 H191 LFA sing 250 n n C19 H192 LFA sing 251 n n C20 H201 LFA sing 252 n n C20 H202 LFA sing 253 n n C20 H203 LFA sing 254 n n # _atom_sites.entry_id 4XTL _atom_sites.fract_transf_matrix[1][1] 0.024888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01237 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 101 NA NA . C 3 LFA A 1 302 1 LFA LFA . D 3 LFA A 1 303 3 LFA LFA . E 3 LFA A 1 304 4 LFA LFA . F 3 LFA A 1 305 10 LFA LFA . G 3 LFA A 1 306 11 LFA LFA . H 3 LFA A 1 307 13 LFA LFA . I 3 LFA A 1 308 14 LFA LFA . J 3 LFA A 1 309 15 LFA LFA . K 3 LFA A 1 310 17 LFA LFA . L 3 LFA A 1 311 18 LFA LFA . M 3 LFA A 1 312 19 LFA LFA . N 3 LFA A 1 313 20 LFA LFA . O 3 LFA A 1 314 21 LFA LFA . P 3 LFA A 1 315 24 LFA LFA . Q 3 LFA A 1 316 25 LFA LFA . R 3 LFA A 1 317 26 LFA LFA . S 3 LFA A 1 318 27 LFA LFA . T 3 LFA A 1 319 28 LFA LFA . U 3 LFA A 1 320 30 LFA LFA . V 3 LFA A 1 321 31 LFA LFA . W 3 LFA A 1 322 32 LFA LFA . X 3 LFA A 1 323 34 LFA LFA . Y 3 LFA A 1 324 35 LFA LFA . Z 3 LFA A 1 325 36 LFA LFA . AA 3 LFA A 1 326 37 LFA LFA . BA 3 LFA A 1 327 38 LFA LFA . CA 3 LFA A 1 328 39 LFA LFA . DA 3 LFA A 1 329 41 LFA LFA . EA 3 LFA A 1 330 42 LFA LFA . FA 3 LFA A 1 331 43 LFA LFA . GA 3 LFA A 1 332 44 LFA LFA . HA 3 LFA A 1 333 45 LFA LFA . IA 3 LFA A 1 334 46 LFA LFA . JA 3 LFA A 1 335 47 LFA LFA . KA 4 GOL A 1 336 1 GOL GOL . LA 4 GOL A 1 337 2 GOL GOL . MA 5 HOH A 1 401 137 HOH HOH . MA 5 HOH A 2 402 114 HOH HOH . MA 5 HOH A 3 403 31 HOH HOH . MA 5 HOH A 4 404 142 HOH HOH . MA 5 HOH A 5 405 58 HOH HOH . MA 5 HOH A 6 406 159 HOH HOH . MA 5 HOH A 7 407 17 HOH HOH . MA 5 HOH A 8 408 11 HOH HOH . MA 5 HOH A 9 409 130 HOH HOH . MA 5 HOH A 10 410 171 HOH HOH . MA 5 HOH A 11 411 110 HOH HOH . MA 5 HOH A 12 412 104 HOH HOH . MA 5 HOH A 13 413 59 HOH HOH . MA 5 HOH A 14 414 101 HOH HOH . MA 5 HOH A 15 415 180 HOH HOH . MA 5 HOH A 16 416 56 HOH HOH . MA 5 HOH A 17 417 173 HOH HOH . MA 5 HOH A 18 418 20 HOH HOH . MA 5 HOH A 19 419 30 HOH HOH . MA 5 HOH A 20 420 50 HOH HOH . MA 5 HOH A 21 421 34 HOH HOH . MA 5 HOH A 22 422 16 HOH HOH . MA 5 HOH A 23 423 41 HOH HOH . MA 5 HOH A 24 424 42 HOH HOH . MA 5 HOH A 25 425 21 HOH HOH . MA 5 HOH A 26 426 172 HOH HOH . MA 5 HOH A 27 427 170 HOH HOH . MA 5 HOH A 28 428 106 HOH HOH . MA 5 HOH A 29 429 175 HOH HOH . MA 5 HOH A 30 430 184 HOH HOH . MA 5 HOH A 31 431 179 HOH HOH . MA 5 HOH A 32 432 139 HOH HOH . MA 5 HOH A 33 433 19 HOH HOH . MA 5 HOH A 34 434 1 HOH HOH . MA 5 HOH A 35 435 2 HOH HOH . MA 5 HOH A 36 436 3 HOH HOH . MA 5 HOH A 37 437 4 HOH HOH . MA 5 HOH A 38 438 5 HOH HOH . MA 5 HOH A 39 439 6 HOH HOH . MA 5 HOH A 40 440 7 HOH HOH . MA 5 HOH A 41 441 8 HOH HOH . MA 5 HOH A 42 442 9 HOH HOH . MA 5 HOH A 43 443 10 HOH HOH . MA 5 HOH A 44 444 12 HOH HOH . MA 5 HOH A 45 445 13 HOH HOH . MA 5 HOH A 46 446 14 HOH HOH . MA 5 HOH A 47 447 15 HOH HOH . MA 5 HOH A 48 448 18 HOH HOH . MA 5 HOH A 49 449 22 HOH HOH . MA 5 HOH A 50 450 24 HOH HOH . MA 5 HOH A 51 451 25 HOH HOH . MA 5 HOH A 52 452 26 HOH HOH . MA 5 HOH A 53 453 27 HOH HOH . MA 5 HOH A 54 454 28 HOH HOH . MA 5 HOH A 55 455 29 HOH HOH . MA 5 HOH A 56 456 32 HOH HOH . MA 5 HOH A 57 457 33 HOH HOH . MA 5 HOH A 58 458 35 HOH HOH . MA 5 HOH A 59 459 36 HOH HOH . MA 5 HOH A 60 460 37 HOH HOH . MA 5 HOH A 61 461 38 HOH HOH . MA 5 HOH A 62 462 39 HOH HOH . MA 5 HOH A 63 463 40 HOH HOH . MA 5 HOH A 64 464 43 HOH HOH . MA 5 HOH A 65 465 44 HOH HOH . MA 5 HOH A 66 466 45 HOH HOH . MA 5 HOH A 67 467 46 HOH HOH . MA 5 HOH A 68 468 47 HOH HOH . MA 5 HOH A 69 469 48 HOH HOH . MA 5 HOH A 70 470 49 HOH HOH . MA 5 HOH A 71 471 51 HOH HOH . MA 5 HOH A 72 472 52 HOH HOH . MA 5 HOH A 73 473 53 HOH HOH . MA 5 HOH A 74 474 54 HOH HOH . MA 5 HOH A 75 475 55 HOH HOH . MA 5 HOH A 76 476 57 HOH HOH . MA 5 HOH A 77 477 102 HOH HOH . MA 5 HOH A 78 478 103 HOH HOH . MA 5 HOH A 79 479 105 HOH HOH . MA 5 HOH A 80 480 107 HOH HOH . MA 5 HOH A 81 481 108 HOH HOH . MA 5 HOH A 82 482 109 HOH HOH . MA 5 HOH A 83 483 111 HOH HOH . MA 5 HOH A 84 484 112 HOH HOH . MA 5 HOH A 85 485 113 HOH HOH . MA 5 HOH A 86 486 115 HOH HOH . MA 5 HOH A 87 487 116 HOH HOH . MA 5 HOH A 88 488 117 HOH HOH . MA 5 HOH A 89 489 118 HOH HOH . MA 5 HOH A 90 490 119 HOH HOH . MA 5 HOH A 91 491 120 HOH HOH . MA 5 HOH A 92 492 121 HOH HOH . MA 5 HOH A 93 493 122 HOH HOH . MA 5 HOH A 94 494 123 HOH HOH . MA 5 HOH A 95 495 124 HOH HOH . MA 5 HOH A 96 496 125 HOH HOH . MA 5 HOH A 97 497 126 HOH HOH . MA 5 HOH A 98 498 127 HOH HOH . MA 5 HOH A 99 499 128 HOH HOH . MA 5 HOH A 100 500 129 HOH HOH . MA 5 HOH A 101 501 131 HOH HOH . MA 5 HOH A 102 502 132 HOH HOH . MA 5 HOH A 103 503 133 HOH HOH . MA 5 HOH A 104 504 135 HOH HOH . MA 5 HOH A 105 505 136 HOH HOH . MA 5 HOH A 106 506 138 HOH HOH . MA 5 HOH A 107 507 140 HOH HOH . MA 5 HOH A 108 508 141 HOH HOH . MA 5 HOH A 109 509 143 HOH HOH . MA 5 HOH A 110 510 144 HOH HOH . MA 5 HOH A 111 511 145 HOH HOH . MA 5 HOH A 112 512 146 HOH HOH . MA 5 HOH A 113 513 147 HOH HOH . MA 5 HOH A 114 514 148 HOH HOH . MA 5 HOH A 115 515 149 HOH HOH . MA 5 HOH A 116 516 150 HOH HOH . MA 5 HOH A 117 517 151 HOH HOH . MA 5 HOH A 118 518 152 HOH HOH . MA 5 HOH A 119 519 153 HOH HOH . MA 5 HOH A 120 520 154 HOH HOH . MA 5 HOH A 121 521 155 HOH HOH . MA 5 HOH A 122 522 156 HOH HOH . MA 5 HOH A 123 523 157 HOH HOH . MA 5 HOH A 124 524 158 HOH HOH . MA 5 HOH A 125 525 160 HOH HOH . MA 5 HOH A 126 526 161 HOH HOH . MA 5 HOH A 127 527 162 HOH HOH . MA 5 HOH A 128 528 163 HOH HOH . MA 5 HOH A 129 529 164 HOH HOH . MA 5 HOH A 130 530 165 HOH HOH . MA 5 HOH A 131 531 166 HOH HOH . MA 5 HOH A 132 532 167 HOH HOH . MA 5 HOH A 133 533 168 HOH HOH . MA 5 HOH A 134 534 169 HOH HOH . MA 5 HOH A 135 535 174 HOH HOH . MA 5 HOH A 136 536 176 HOH HOH . MA 5 HOH A 137 537 177 HOH HOH . MA 5 HOH A 138 538 178 HOH HOH . MA 5 HOH A 139 539 181 HOH HOH . MA 5 HOH A 140 540 182 HOH HOH . MA 5 HOH A 141 541 183 HOH HOH . MA 5 HOH A 142 542 185 HOH HOH . MA 5 HOH A 143 543 186 HOH HOH . MA 5 HOH A 144 544 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . JA 3 24.719 1.348 23.678 1 67.1 ? C1 LFA 335 A 1 HETATM 2 C C2 LFA . . . JA 3 24.23 1.565 22.261 1 67.87 ? C2 LFA 335 A 1 HETATM 3 C C3 LFA . . . JA 3 24.644 0.418 21.34 1 73.86 ? C3 LFA 335 A 1 HETATM 4 C C4 LFA . . . JA 3 24.238 0.667 19.888 1 72.27 ? C4 LFA 335 A 1 HETATM 5 C C5 LFA . . . JA 3 22.722 0.794 19.726 1 81.9 ? C5 LFA 335 A 1 HETATM 6 C C6 LFA . . . JA 3 22.193 -0.025 18.548 1 82.77 ? C6 LFA 335 A 1 HETATM 7 C C7 LFA . . . JA 3 21.655 0.854 17.42 1 83.32 ? C7 LFA 335 A 1 HETATM 8 C C8 LFA . . . JA 3 22.49 0.727 16.15 1 78.42 ? C8 LFA 335 A 1 HETATM 9 C C9 LFA . . . JA 3 21.703 1.223 14.941 1 79.05 ? C9 LFA 335 A 1 HETATM 10 C C10 LFA . . . JA 3 22.605 1.41 13.728 1 68.23 ? C10 LFA 335 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #