data_4XU3
#
_model_server_result.job_id            Qzll2ExNitkopC8c9QEizQ 
_model_server_result.datetime_utc      '2025-09-24 04:46:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xu3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    4XU3 
#
_exptl.entry_id    4XU3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              513.594 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-({2-[(6-amino-9H-purin-9-yl)methoxy]ethyl}sulfamoyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4XU3 
_cell.length_a            63.326 
_cell.length_b            68.73 
_cell.length_c            114.093 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XU3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C18 H27 N9 O5 S2' 
_chem_comp.formula_weight    513.594 
_chem_comp.id                44R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-({2-[(6-amino-9H-purin-9-yl)methoxy]ethyl}sulfamoyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAE SBK 44R doub 1 n n 
OAD SBK 44R doub 2 n n 
SBK NAW 44R sing 3 n n 
SBK NAV 44R sing 4 n n 
NAW CAN 44R sing 5 n n 
NAV CAZ 44R sing 6 n n 
CAN CBE 44R sing 7 n n 
CAZ OAB 44R doub 8 n n 
CAZ CAJ 44R sing 9 n n 
CBE OAX 44R sing 10 n n 
OAX CBG 44R sing 11 n n 
CAJ CAH 44R sing 12 n n 
CBG N9 44R sing 13 n n 
CAH CAI 44R sing 14 n n 
N9 C4 44R sing 15 n y 
N9 C8 44R sing 16 n y 
N3 C4 44R doub 17 n y 
N3 C2 44R sing 18 n y 
CAI CAK 44R sing 19 n n 
C4 C5 44R sing 20 n y 
C8 N7 44R doub 21 n y 
C2 N1 44R doub 22 n y 
C5 N7 44R sing 23 n y 
C5 C6 44R doub 24 n y 
CAK CBH 44R sing 25 n n 
N1 C6 44R sing 26 n y 
NAU CBI 44R sing 27 n n 
NAU CBA 44R sing 28 n n 
C6 N6 44R sing 29 n n 
CBI CBH 44R sing 30 n n 
CBI CBF 44R sing 31 n n 
CBH SAY 44R sing 32 n n 
OAC CBA 44R doub 33 n n 
CBA NAT 44R sing 34 n n 
CBF NAT 44R sing 35 n n 
CBF CAO 44R sing 36 n n 
SAY CAO 44R sing 37 n n 
C2 H1 44R sing 38 n n 
C8 H2 44R sing 39 n n 
CBI H3 44R sing 40 n n 
NAU H4 44R sing 41 n n 
NAT H5 44R sing 42 n n 
CBF H6 44R sing 43 n n 
CAO H7 44R sing 44 n n 
CAO H8 44R sing 45 n n 
CBH H9 44R sing 46 n n 
CAK H10 44R sing 47 n n 
CAK H11 44R sing 48 n n 
CAI H12 44R sing 49 n n 
CAI H13 44R sing 50 n n 
CAH H14 44R sing 51 n n 
CAH H15 44R sing 52 n n 
CAJ H16 44R sing 53 n n 
CAJ H17 44R sing 54 n n 
NAV H18 44R sing 55 n n 
NAW H19 44R sing 56 n n 
CAN H20 44R sing 57 n n 
CAN H21 44R sing 58 n n 
CBE H22 44R sing 59 n n 
CBE H23 44R sing 60 n n 
CBG H24 44R sing 61 n n 
CBG H25 44R sing 62 n n 
N6 H26 44R sing 63 n n 
N6 H27 44R sing 64 n n 
#
_atom_sites.entry_id                     4XU3 
_atom_sites.fract_transf_matrix[1][1]    0.015791 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01455 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008765 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 44R A 1 301 300 44R 607 . 
D 3 CL A 1 302 400 CL CL . 
E 2 44R B 1 300 300 44R 607 . 
F 4 HOH A 1 401 119 HOH HOH . 
F 4 HOH A 2 402 32 HOH HOH . 
F 4 HOH A 3 403 64 HOH HOH . 
F 4 HOH A 4 404 77 HOH HOH . 
F 4 HOH A 5 405 160 HOH HOH . 
F 4 HOH A 6 406 61 HOH HOH . 
F 4 HOH A 7 407 52 HOH HOH . 
F 4 HOH A 8 408 92 HOH HOH . 
F 4 HOH A 9 409 11 HOH HOH . 
F 4 HOH A 10 410 80 HOH HOH . 
F 4 HOH A 11 411 84 HOH HOH . 
F 4 HOH A 12 412 165 HOH HOH . 
F 4 HOH A 13 413 7 HOH HOH . 
F 4 HOH A 14 414 39 HOH HOH . 
F 4 HOH A 15 415 25 HOH HOH . 
F 4 HOH A 16 416 3 HOH HOH . 
F 4 HOH A 17 417 114 HOH HOH . 
F 4 HOH A 18 418 48 HOH HOH . 
F 4 HOH A 19 419 173 HOH HOH . 
F 4 HOH A 20 420 10 HOH HOH . 
F 4 HOH A 21 421 74 HOH HOH . 
F 4 HOH A 22 422 123 HOH HOH . 
F 4 HOH A 23 423 164 HOH HOH . 
F 4 HOH A 24 424 68 HOH HOH . 
F 4 HOH A 25 425 9 HOH HOH . 
F 4 HOH A 26 426 144 HOH HOH . 
F 4 HOH A 27 427 12 HOH HOH . 
F 4 HOH A 28 428 70 HOH HOH . 
F 4 HOH A 29 429 124 HOH HOH . 
F 4 HOH A 30 430 89 HOH HOH . 
F 4 HOH A 31 431 133 HOH HOH . 
F 4 HOH A 32 432 40 HOH HOH . 
F 4 HOH A 33 433 110 HOH HOH . 
F 4 HOH A 34 434 23 HOH HOH . 
F 4 HOH A 35 435 172 HOH HOH . 
F 4 HOH A 36 436 103 HOH HOH . 
F 4 HOH A 37 437 72 HOH HOH . 
F 4 HOH A 38 438 138 HOH HOH . 
F 4 HOH A 39 439 157 HOH HOH . 
F 4 HOH A 40 440 56 HOH HOH . 
F 4 HOH A 41 441 1 HOH HOH . 
F 4 HOH A 42 442 5 HOH HOH . 
F 4 HOH A 43 443 6 HOH HOH . 
F 4 HOH A 44 444 8 HOH HOH . 
F 4 HOH A 45 445 13 HOH HOH . 
F 4 HOH A 46 446 17 HOH HOH . 
F 4 HOH A 47 447 21 HOH HOH . 
F 4 HOH A 48 448 22 HOH HOH . 
F 4 HOH A 49 449 28 HOH HOH . 
F 4 HOH A 50 450 29 HOH HOH . 
F 4 HOH A 51 451 34 HOH HOH . 
F 4 HOH A 52 452 35 HOH HOH . 
F 4 HOH A 53 453 37 HOH HOH . 
F 4 HOH A 54 454 38 HOH HOH . 
F 4 HOH A 55 455 41 HOH HOH . 
F 4 HOH A 56 456 42 HOH HOH . 
F 4 HOH A 57 457 45 HOH HOH . 
F 4 HOH A 58 458 46 HOH HOH . 
F 4 HOH A 59 459 47 HOH HOH . 
F 4 HOH A 60 460 51 HOH HOH . 
F 4 HOH A 61 461 53 HOH HOH . 
F 4 HOH A 62 462 55 HOH HOH . 
F 4 HOH A 63 463 60 HOH HOH . 
F 4 HOH A 64 464 62 HOH HOH . 
F 4 HOH A 65 465 63 HOH HOH . 
F 4 HOH A 66 466 66 HOH HOH . 
F 4 HOH A 67 467 73 HOH HOH . 
F 4 HOH A 68 468 79 HOH HOH . 
F 4 HOH A 69 469 81 HOH HOH . 
F 4 HOH A 70 470 82 HOH HOH . 
F 4 HOH A 71 471 85 HOH HOH . 
F 4 HOH A 72 472 86 HOH HOH . 
F 4 HOH A 73 473 87 HOH HOH . 
F 4 HOH A 74 474 90 HOH HOH . 
F 4 HOH A 75 475 95 HOH HOH . 
F 4 HOH A 76 476 99 HOH HOH . 
F 4 HOH A 77 477 100 HOH HOH . 
F 4 HOH A 78 478 105 HOH HOH . 
F 4 HOH A 79 479 108 HOH HOH . 
F 4 HOH A 80 480 111 HOH HOH . 
F 4 HOH A 81 481 113 HOH HOH . 
F 4 HOH A 82 482 118 HOH HOH . 
F 4 HOH A 83 483 122 HOH HOH . 
F 4 HOH A 84 484 128 HOH HOH . 
F 4 HOH A 85 485 137 HOH HOH . 
F 4 HOH A 86 486 139 HOH HOH . 
F 4 HOH A 87 487 143 HOH HOH . 
F 4 HOH A 88 488 146 HOH HOH . 
F 4 HOH A 89 489 152 HOH HOH . 
F 4 HOH A 90 490 153 HOH HOH . 
F 4 HOH A 91 491 159 HOH HOH . 
F 4 HOH A 92 492 169 HOH HOH . 
F 4 HOH A 93 493 170 HOH HOH . 
F 4 HOH A 94 494 175 HOH HOH . 
F 4 HOH A 95 495 176 HOH HOH . 
F 4 HOH A 96 496 177 HOH HOH . 
F 4 HOH A 97 497 178 HOH HOH . 
F 4 HOH A 98 498 179 HOH HOH . 
F 4 HOH A 99 499 180 HOH HOH . 
G 4 HOH B 1 401 58 HOH HOH . 
G 4 HOH B 2 402 107 HOH HOH . 
G 4 HOH B 3 403 158 HOH HOH . 
G 4 HOH B 4 404 141 HOH HOH . 
G 4 HOH B 5 405 112 HOH HOH . 
G 4 HOH B 6 406 15 HOH HOH . 
G 4 HOH B 7 407 19 HOH HOH . 
G 4 HOH B 8 408 78 HOH HOH . 
G 4 HOH B 9 409 156 HOH HOH . 
G 4 HOH B 10 410 33 HOH HOH . 
G 4 HOH B 11 411 102 HOH HOH . 
G 4 HOH B 12 412 67 HOH HOH . 
G 4 HOH B 13 413 16 HOH HOH . 
G 4 HOH B 14 414 69 HOH HOH . 
G 4 HOH B 15 415 91 HOH HOH . 
G 4 HOH B 16 416 2 HOH HOH . 
G 4 HOH B 17 417 4 HOH HOH . 
G 4 HOH B 18 418 30 HOH HOH . 
G 4 HOH B 19 419 115 HOH HOH . 
G 4 HOH B 20 420 161 HOH HOH . 
G 4 HOH B 21 421 83 HOH HOH . 
G 4 HOH B 22 422 43 HOH HOH . 
G 4 HOH B 23 423 166 HOH HOH . 
G 4 HOH B 24 424 49 HOH HOH . 
G 4 HOH B 25 425 31 HOH HOH . 
G 4 HOH B 26 426 94 HOH HOH . 
G 4 HOH B 27 427 168 HOH HOH . 
G 4 HOH B 28 428 147 HOH HOH . 
G 4 HOH B 29 429 54 HOH HOH . 
G 4 HOH B 30 430 155 HOH HOH . 
G 4 HOH B 31 431 140 HOH HOH . 
G 4 HOH B 32 432 57 HOH HOH . 
G 4 HOH B 33 433 135 HOH HOH . 
G 4 HOH B 34 434 136 HOH HOH . 
G 4 HOH B 35 435 14 HOH HOH . 
G 4 HOH B 36 436 18 HOH HOH . 
G 4 HOH B 37 437 20 HOH HOH . 
G 4 HOH B 38 438 24 HOH HOH . 
G 4 HOH B 39 439 26 HOH HOH . 
G 4 HOH B 40 440 27 HOH HOH . 
G 4 HOH B 41 441 36 HOH HOH . 
G 4 HOH B 42 442 44 HOH HOH . 
G 4 HOH B 43 443 50 HOH HOH . 
G 4 HOH B 44 444 59 HOH HOH . 
G 4 HOH B 45 445 65 HOH HOH . 
G 4 HOH B 46 446 71 HOH HOH . 
G 4 HOH B 47 447 75 HOH HOH . 
G 4 HOH B 48 448 76 HOH HOH . 
G 4 HOH B 49 449 88 HOH HOH . 
G 4 HOH B 50 450 93 HOH HOH . 
G 4 HOH B 51 451 96 HOH HOH . 
G 4 HOH B 52 452 97 HOH HOH . 
G 4 HOH B 53 453 98 HOH HOH . 
G 4 HOH B 54 454 101 HOH HOH . 
G 4 HOH B 55 455 104 HOH HOH . 
G 4 HOH B 56 456 106 HOH HOH . 
G 4 HOH B 57 457 109 HOH HOH . 
G 4 HOH B 58 458 116 HOH HOH . 
G 4 HOH B 59 459 117 HOH HOH . 
G 4 HOH B 60 460 120 HOH HOH . 
G 4 HOH B 61 461 121 HOH HOH . 
G 4 HOH B 62 462 125 HOH HOH . 
G 4 HOH B 63 463 126 HOH HOH . 
G 4 HOH B 64 464 127 HOH HOH . 
G 4 HOH B 65 465 129 HOH HOH . 
G 4 HOH B 66 466 130 HOH HOH . 
G 4 HOH B 67 467 131 HOH HOH . 
G 4 HOH B 68 468 132 HOH HOH . 
G 4 HOH B 69 469 134 HOH HOH . 
G 4 HOH B 70 470 142 HOH HOH . 
G 4 HOH B 71 471 145 HOH HOH . 
G 4 HOH B 72 472 148 HOH HOH . 
G 4 HOH B 73 473 149 HOH HOH . 
G 4 HOH B 74 474 150 HOH HOH . 
G 4 HOH B 75 475 154 HOH HOH . 
G 4 HOH B 76 476 162 HOH HOH . 
G 4 HOH B 77 477 163 HOH HOH . 
G 4 HOH B 78 478 167 HOH HOH . 
G 4 HOH B 79 479 171 HOH HOH . 
G 4 HOH B 80 480 174 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 44R . . . C 2 -7.983 -0.836 11.943 1 29.57 ? C2 44R 301 A 1 
HETATM 2 C C4 44R . . . C 2 -5.715 -0.418 11.586 1 30.65 ? C4 44R 301 A 1 
HETATM 3 C C5 44R . . . C 2 -5.469 -0.617 12.933 1 31.32 ? C5 44R 301 A 1 
HETATM 4 C C6 44R . . . C 2 -6.528 -0.926 13.773 1 31.02 ? C6 44R 301 A 1 
HETATM 5 N N1 44R . . . C 2 -7.771 -1.027 13.254 1 30.56 ? N1 44R 301 A 1 
HETATM 6 N N3 44R . . . C 2 -6.977 -0.536 11.111 1 31.51 ? N3 44R 301 A 1 
HETATM 7 C C8 44R . . . C 2 -3.589 -0.156 11.939 1 32.19 ? C8 44R 301 A 1 
HETATM 8 C CBI 44R . . . C 2 -2.173 -10.038 13.86 1 34.88 ? CBI 44R 301 A 1 
HETATM 9 N NAU 44R . . . C 2 -0.967 -9.329 13.476 1 34.35 ? NAU 44R 301 A 1 
HETATM 10 C CBA 44R . . . C 2 -0.014 -9.45 14.396 1 37.92 ? CBA 44R 301 A 1 
HETATM 11 O OAC 44R . . . C 2 1.077 -8.903 14.353 1 34.2 ? OAC 44R 301 A 1 
HETATM 12 N NAT 44R . . . C 2 -0.416 -10.237 15.383 1 28.78 ? NAT 44R 301 A 1 
HETATM 13 C CBF 44R . . . C 2 -1.82 -10.552 15.257 1 30.86 ? CBF 44R 301 A 1 
HETATM 14 C CAO 44R . . . C 2 -2.562 -9.808 16.356 1 34.27 ? CAO 44R 301 A 1 
HETATM 15 S SAY 44R . . . C 2 -3.592 -8.643 15.547 1 31.32 ? SAY 44R 301 A 1 
HETATM 16 C CBH 44R . . . C 2 -3.392 -9.121 13.87 1 31.54 ? CBH 44R 301 A 1 
HETATM 17 C CAK 44R . . . C 2 -3.212 -7.911 12.966 1 29.25 ? CAK 44R 301 A 1 
HETATM 18 C CAI 44R . . . C 2 -3.558 -8.295 11.533 1 29.09 ? CAI 44R 301 A 1 
HETATM 19 C CAH 44R . . . C 2 -3.683 -7.067 10.642 1 30.2 ? CAH 44R 301 A 1 
HETATM 20 C CAJ 44R . . . C 2 -4.079 -7.476 9.23 1 28.61 ? CAJ 44R 301 A 1 
HETATM 21 C CAZ 44R . . . C 2 -4.459 -6.253 8.43 1 28.9 ? CAZ 44R 301 A 1 
HETATM 22 O OAB 44R . . . C 2 -5.542 -5.723 8.611 1 28.78 ? OAB 44R 301 A 1 
HETATM 23 N NAV 44R . . . C 2 -3.56 -5.822 7.546 1 31.02 ? NAV 44R 301 A 1 
HETATM 24 S SBK 44R . . . C 2 -3.954 -4.765 6.407 1 40.11 ? SBK 44R 301 A 1 
HETATM 25 O OAD 44R . . . C 2 -5.313 -4.967 5.99 1 34.28 ? OAD 44R 301 A 1 
HETATM 26 O OAE 44R . . . C 2 -3.094 -4.934 5.269 1 38.89 ? OAE 44R 301 A 1 
HETATM 27 N NAW 44R . . . C 2 -3.776 -3.269 6.939 1 33.8 ? NAW 44R 301 A 1 
HETATM 28 C CAN 44R . . . C 2 -3.068 -3.004 8.173 1 36.71 ? CAN 44R 301 A 1 
HETATM 29 C CBE 44R . . . C 2 -3.037 -1.512 8.479 1 38.95 ? CBE 44R 301 A 1 
HETATM 30 O OAX 44R . . . C 2 -4.334 -1.133 8.925 1 33.63 ? OAX 44R 301 A 1 
HETATM 31 C CBG 44R . . . C 2 -4.346 0.131 9.583 1 32.07 ? CBG 44R 301 A 1 
HETATM 32 N N9 44R . . . C 2 -4.547 -0.143 11.002 1 34.04 ? N9 44R 301 A 1 
HETATM 33 N N7 44R . . . C 2 -4.147 -0.449 13.134 1 29.99 ? N7 44R 301 A 1 
HETATM 34 N N6 44R . . . C 2 -6.317 -1.123 15.098 1 28.06 ? N6 44R 301 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           34 
#