data_4XUD # _model_server_result.job_id Y5jtmk9yKBPTMINt8Kpoug _model_server_result.datetime_utc '2024-11-05 21:00:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 4XUD # _exptl.entry_id 4XUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XUD _cell.length_a 43.812 _cell.length_b 57.631 _cell.length_c 98.249 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 144 A ASP 191 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 A OD2 ASP 172 A ASP 219 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc3 A OD1 ASN 173 A ASN 220 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc4 B O 43H . A 43H 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc5 B O5 43H . A 43H 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc6 C MG MG . A MG 302 1_555 F O HOH . A HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 257 n n O1 C6 MES sing 258 n n C2 C3 MES sing 259 n n C2 H21 MES sing 260 n n C2 H22 MES sing 261 n n C3 N4 MES sing 262 n n C3 H31 MES sing 263 n n C3 H32 MES sing 264 n n N4 C5 MES sing 265 n n N4 C7 MES sing 266 n n N4 HN4 MES sing 267 n n C5 C6 MES sing 268 n n C5 H51 MES sing 269 n n C5 H52 MES sing 270 n n C6 H61 MES sing 271 n n C6 H62 MES sing 272 n n C7 C8 MES sing 273 n n C7 H71 MES sing 274 n n C7 H72 MES sing 275 n n C8 S MES sing 276 n n C8 H81 MES sing 277 n n C8 H82 MES sing 278 n n S O1S MES doub 279 n n S O2S MES doub 280 n n S O3S MES sing 281 n n # _atom_sites.entry_id 4XUD _atom_sites.fract_transf_matrix[1][1] 0.022825 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017352 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 43H A 1 301 1 43H 340 . C 3 MG A 1 302 1 MG MG . D 4 SAM A 1 303 2 SAM SAM . E 5 MES A 1 304 3 MES MES . F 6 HOH A 1 401 162 HOH HOH . F 6 HOH A 2 402 100 HOH HOH . F 6 HOH A 3 403 42 HOH HOH . F 6 HOH A 4 404 102 HOH HOH . F 6 HOH A 5 405 77 HOH HOH . F 6 HOH A 6 406 7 HOH HOH . F 6 HOH A 7 407 72 HOH HOH . F 6 HOH A 8 408 39 HOH HOH . F 6 HOH A 9 409 105 HOH HOH . F 6 HOH A 10 410 36 HOH HOH . F 6 HOH A 11 411 15 HOH HOH . F 6 HOH A 12 412 95 HOH HOH . F 6 HOH A 13 413 99 HOH HOH . F 6 HOH A 14 414 49 HOH HOH . F 6 HOH A 15 415 70 HOH HOH . F 6 HOH A 16 416 20 HOH HOH . F 6 HOH A 17 417 29 HOH HOH . F 6 HOH A 18 418 24 HOH HOH . F 6 HOH A 19 419 46 HOH HOH . F 6 HOH A 20 420 13 HOH HOH . F 6 HOH A 21 421 22 HOH HOH . F 6 HOH A 22 422 31 HOH HOH . F 6 HOH A 23 423 89 HOH HOH . F 6 HOH A 24 424 25 HOH HOH . F 6 HOH A 25 425 21 HOH HOH . F 6 HOH A 26 426 12 HOH HOH . F 6 HOH A 27 427 17 HOH HOH . F 6 HOH A 28 428 116 HOH HOH . F 6 HOH A 29 429 64 HOH HOH . F 6 HOH A 30 430 87 HOH HOH . F 6 HOH A 31 431 124 HOH HOH . F 6 HOH A 32 432 67 HOH HOH . F 6 HOH A 33 433 135 HOH HOH . F 6 HOH A 34 434 98 HOH HOH . F 6 HOH A 35 435 79 HOH HOH . F 6 HOH A 36 436 57 HOH HOH . F 6 HOH A 37 437 90 HOH HOH . F 6 HOH A 38 438 97 HOH HOH . F 6 HOH A 39 439 93 HOH HOH . F 6 HOH A 40 440 88 HOH HOH . F 6 HOH A 41 441 113 HOH HOH . F 6 HOH A 42 442 81 HOH HOH . F 6 HOH A 43 443 120 HOH HOH . F 6 HOH A 44 444 111 HOH HOH . F 6 HOH A 45 445 140 HOH HOH . F 6 HOH A 46 446 104 HOH HOH . F 6 HOH A 47 447 141 HOH HOH . F 6 HOH A 48 448 157 HOH HOH . F 6 HOH A 49 449 84 HOH HOH . F 6 HOH A 50 450 145 HOH HOH . F 6 HOH A 51 451 130 HOH HOH . F 6 HOH A 52 452 114 HOH HOH . F 6 HOH A 53 453 92 HOH HOH . F 6 HOH A 54 454 30 HOH HOH . F 6 HOH A 55 455 146 HOH HOH . F 6 HOH A 56 456 158 HOH HOH . F 6 HOH A 57 457 144 HOH HOH . F 6 HOH A 58 458 147 HOH HOH . F 6 HOH A 59 459 1 HOH HOH . F 6 HOH A 60 460 8 HOH HOH . F 6 HOH A 61 461 9 HOH HOH . F 6 HOH A 62 462 10 HOH HOH . F 6 HOH A 63 463 11 HOH HOH . F 6 HOH A 64 464 14 HOH HOH . F 6 HOH A 65 465 16 HOH HOH . F 6 HOH A 66 466 18 HOH HOH . F 6 HOH A 67 467 19 HOH HOH . F 6 HOH A 68 468 23 HOH HOH . F 6 HOH A 69 469 26 HOH HOH . F 6 HOH A 70 470 27 HOH HOH . F 6 HOH A 71 471 28 HOH HOH . F 6 HOH A 72 472 32 HOH HOH . F 6 HOH A 73 473 33 HOH HOH . F 6 HOH A 74 474 34 HOH HOH . F 6 HOH A 75 475 35 HOH HOH . F 6 HOH A 76 476 37 HOH HOH . F 6 HOH A 77 477 38 HOH HOH . F 6 HOH A 78 478 40 HOH HOH . F 6 HOH A 79 479 41 HOH HOH . F 6 HOH A 80 480 43 HOH HOH . F 6 HOH A 81 481 44 HOH HOH . F 6 HOH A 82 482 45 HOH HOH . F 6 HOH A 83 483 47 HOH HOH . F 6 HOH A 84 484 48 HOH HOH . F 6 HOH A 85 485 50 HOH HOH . F 6 HOH A 86 486 51 HOH HOH . F 6 HOH A 87 487 52 HOH HOH . F 6 HOH A 88 488 53 HOH HOH . F 6 HOH A 89 489 54 HOH HOH . F 6 HOH A 90 490 55 HOH HOH . F 6 HOH A 91 491 56 HOH HOH . F 6 HOH A 92 492 58 HOH HOH . F 6 HOH A 93 493 59 HOH HOH . F 6 HOH A 94 494 60 HOH HOH . F 6 HOH A 95 495 61 HOH HOH . F 6 HOH A 96 496 62 HOH HOH . F 6 HOH A 97 497 63 HOH HOH . F 6 HOH A 98 498 65 HOH HOH . F 6 HOH A 99 499 66 HOH HOH . F 6 HOH A 100 500 68 HOH HOH . F 6 HOH A 101 501 69 HOH HOH . F 6 HOH A 102 502 71 HOH HOH . F 6 HOH A 103 503 73 HOH HOH . F 6 HOH A 104 504 74 HOH HOH . F 6 HOH A 105 505 75 HOH HOH . F 6 HOH A 106 506 76 HOH HOH . F 6 HOH A 107 507 78 HOH HOH . F 6 HOH A 108 508 80 HOH HOH . F 6 HOH A 109 509 82 HOH HOH . F 6 HOH A 110 510 83 HOH HOH . F 6 HOH A 111 511 85 HOH HOH . F 6 HOH A 112 512 86 HOH HOH . F 6 HOH A 113 513 91 HOH HOH . F 6 HOH A 114 514 94 HOH HOH . F 6 HOH A 115 515 96 HOH HOH . F 6 HOH A 116 516 101 HOH HOH . F 6 HOH A 117 517 103 HOH HOH . F 6 HOH A 118 518 106 HOH HOH . F 6 HOH A 119 519 107 HOH HOH . F 6 HOH A 120 520 108 HOH HOH . F 6 HOH A 121 521 109 HOH HOH . F 6 HOH A 122 522 110 HOH HOH . F 6 HOH A 123 523 112 HOH HOH . F 6 HOH A 124 524 115 HOH HOH . F 6 HOH A 125 525 117 HOH HOH . F 6 HOH A 126 526 118 HOH HOH . F 6 HOH A 127 527 119 HOH HOH . F 6 HOH A 128 528 121 HOH HOH . F 6 HOH A 129 529 122 HOH HOH . F 6 HOH A 130 530 123 HOH HOH . F 6 HOH A 131 531 125 HOH HOH . F 6 HOH A 132 532 126 HOH HOH . F 6 HOH A 133 533 127 HOH HOH . F 6 HOH A 134 534 128 HOH HOH . F 6 HOH A 135 535 129 HOH HOH . F 6 HOH A 136 536 131 HOH HOH . F 6 HOH A 137 537 132 HOH HOH . F 6 HOH A 138 538 133 HOH HOH . F 6 HOH A 139 539 134 HOH HOH . F 6 HOH A 140 540 136 HOH HOH . F 6 HOH A 141 541 137 HOH HOH . F 6 HOH A 142 542 138 HOH HOH . F 6 HOH A 143 543 139 HOH HOH . F 6 HOH A 144 544 142 HOH HOH . F 6 HOH A 145 545 143 HOH HOH . F 6 HOH A 146 546 148 HOH HOH . F 6 HOH A 147 547 149 HOH HOH . F 6 HOH A 148 548 150 HOH HOH . F 6 HOH A 149 549 151 HOH HOH . F 6 HOH A 150 550 152 HOH HOH . F 6 HOH A 151 551 153 HOH HOH . F 6 HOH A 152 552 154 HOH HOH . F 6 HOH A 153 553 155 HOH HOH . F 6 HOH A 154 554 156 HOH HOH . F 6 HOH A 155 555 159 HOH HOH . F 6 HOH A 156 556 160 HOH HOH . F 6 HOH A 157 557 161 HOH HOH . F 6 HOH A 158 558 163 HOH HOH . F 6 HOH A 159 559 164 HOH HOH . F 6 HOH A 160 560 165 HOH HOH . F 6 HOH A 161 561 166 HOH HOH . F 6 HOH A 162 562 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . E 5 -1.3 2.689 -32.675 1 90.2 ? O1 MES 304 A 1 HETATM 2 C C2 MES . . . E 5 -2.538 2.895 -31.993 1 89.6 ? C2 MES 304 A 1 HETATM 3 C C3 MES . . . E 5 -2.882 1.642 -31.179 1 90.05 ? C3 MES 304 A 1 HETATM 4 N N4 MES . . . E 5 -2.895 0.387 -31.998 1 90.19 ? N4 MES 304 A 1 HETATM 5 C C5 MES . . . E 5 -1.858 0.34 -33.079 1 90.27 ? C5 MES 304 A 1 HETATM 6 C C6 MES . . . E 5 -1.529 1.71 -33.698 1 90.24 ? C6 MES 304 A 1 HETATM 7 C C7 MES . . . E 5 -4.251 0.053 -32.527 1 91.5 ? C7 MES 304 A 1 HETATM 8 C C8 MES . . . E 5 -5.031 -0.827 -31.539 1 93.65 ? C8 MES 304 A 1 HETATM 9 S S MES . . . E 5 -6.039 -1.981 -32.312 1 95.33 ? S MES 304 A 1 HETATM 10 O O1S MES . . . E 5 -7.611 -1.385 -32.577 1 95.79 ? O1S MES 304 A 1 HETATM 11 O O2S MES . . . E 5 -5.406 -2.393 -33.842 1 95.23 ? O2S MES 304 A 1 HETATM 12 O O3S MES . . . E 5 -6.201 -3.344 -31.298 1 94.79 ? O3S MES 304 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #