data_4XWG # _model_server_result.job_id aKNurD8Z1sndwf0txkW17g _model_server_result.datetime_utc '2024-11-14 04:17:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xwg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":508}' # _entry.id 4XWG # _exptl.entry_id 4XWG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4XWG _cell.length_a 168.59 _cell.length_b 168.59 _cell.length_c 93.57 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 22 1_555 A SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 A SG CYS 135 L CYS 135 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf4 B SG CYS 153 H CYS 153 1_555 B SG CYS 209 H CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf5 C SG CYS 50 A CYS 50 1_555 C SG CYS 74 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf6 C SG CYS 313 A CYS 313 1_555 C SG CYS 356 A CYS 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? covale ? covale1 C ND2 ASN 84 A ASN 84 1_555 H C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale2 C ND2 ASN 272 A ASN 272 1_555 I C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? covale ? covale3 C ND2 ASN 384 A ASN 384 1_555 J C1 NAG . A NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? metalc ? metalc1 A OD1 ASP 139 L ASP 139 1_555 G ZN ZN . L ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc2 A OD2 ASP 139 L ASP 139 1_555 G ZN ZN . L ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc3 A OD1 ASP 152 L ASP 152 1_555 O ZN ZN . A ZN 508 7_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc4 A OD2 ASP 152 L ASP 152 1_555 O ZN ZN . A ZN 508 7_445 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc5 A OE1 GLU 161 L GLU 161 1_555 D ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc6 A OE2 GLU 161 L GLU 161 1_555 D ZN ZN . L ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc7 A ND1 HIS 189 L HIS 189 1_555 O ZN ZN . A ZN 508 7_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc8 A ND1 HIS 198 L HIS 198 1_555 E ZN ZN . L ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc9 A OE1 GLU 204 L GLU 204 1_555 F ZN ZN . L ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc10 A OE2 GLU 204 L GLU 204 1_555 F ZN ZN . L ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc11 G ZN ZN . L ZN 304 1_555 B NE2 HIS 177 H HIS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc12 C OD1 ASP 44 A ASP 44 1_555 R ZN ZN . A ZN 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc13 C OD2 ASP 44 A ASP 44 1_555 R ZN ZN . A ZN 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc14 C OD1 ASP 73 A ASP 73 1_555 U ZN ZN . A ZN 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc15 C OD2 ASP 73 A ASP 73 1_555 U ZN ZN . A ZN 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc16 C NE2 HIS 122 A HIS 122 1_555 N ZN ZN . A ZN 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc17 C NE2 HIS 168 A HIS 168 1_555 O ZN ZN . A ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc18 C OE1 GLU 261 A GLU 261 1_555 R ZN ZN . A ZN 511 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc19 C OE2 GLU 261 A GLU 261 1_555 R ZN ZN . A ZN 511 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc20 C OD1 ASP 262 A ASP 262 1_555 M ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc21 C OD2 ASP 262 A ASP 262 1_555 M ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc22 C ND1 HIS 263 A HIS 263 1_555 K ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc23 C NE2 HIS 263 A HIS 263 1_555 K ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc24 C NE2 HIS 286 A HIS 286 1_555 K ZN ZN . A ZN 504 6_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc25 C OE1 GLU 288 A GLU 288 1_555 M ZN ZN . A ZN 506 6_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc26 C OE2 GLU 288 A GLU 288 1_555 M ZN ZN . A ZN 506 6_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc27 C OE1 GLU 289 A GLU 289 1_555 M ZN ZN . A ZN 506 6_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc28 C OE2 GLU 289 A GLU 289 1_555 M ZN ZN . A ZN 506 6_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc29 C O HIS 329 A HIS 329 1_555 S ZN ZN . A ZN 512 6_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc30 C NE2 HIS 329 A HIS 329 1_555 V ZN ZN . A ZN 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc31 C OE1 GLU 354 A GLU 354 1_555 S ZN ZN . A ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc32 C OE2 GLU 354 A GLU 354 1_555 S ZN ZN . A ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc33 C ND1 HIS 368 A HIS 368 1_555 T ZN ZN . A ZN 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc34 C NE2 HIS 373 A HIS 373 1_555 Q ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc35 C NE2 HIS 377 A HIS 377 1_555 L ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc36 C NE2 HIS 389 A HIS 389 1_555 P ZN ZN . A ZN 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc37 L ZN ZN . A ZN 505 1_555 Y O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4XWG _atom_sites.fract_transf_matrix[1][1] 0.005932 _atom_sites.fract_transf_matrix[1][2] 0.003425 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006849 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN L 1 301 12 ZN ZN . E 4 ZN L 1 302 14 ZN ZN . F 4 ZN L 1 303 16 ZN ZN . G 4 ZN L 1 304 7 ZN ZN . H 5 NAG A 1 501 2 NAG NAG . I 5 NAG A 1 502 3 NAG NAG . J 5 NAG A 1 503 4 NAG NAG . K 4 ZN A 1 504 1 ZN ZN . L 4 ZN A 1 505 2 ZN ZN . M 4 ZN A 1 506 3 ZN ZN . N 4 ZN A 1 507 4 ZN ZN . O 4 ZN A 1 508 5 ZN ZN . P 4 ZN A 1 509 6 ZN ZN . Q 4 ZN A 1 510 8 ZN ZN . R 4 ZN A 1 511 9 ZN ZN . S 4 ZN A 1 512 10 ZN ZN . T 4 ZN A 1 513 11 ZN ZN . U 4 ZN A 1 514 13 ZN ZN . V 4 ZN A 1 515 15 ZN ZN . W 6 HOH L 1 401 3 HOH HOH . W 6 HOH L 2 402 63 HOH HOH . W 6 HOH L 3 403 106 HOH HOH . W 6 HOH L 4 404 64 HOH HOH . W 6 HOH L 5 405 7 HOH HOH . W 6 HOH L 6 406 8 HOH HOH . W 6 HOH L 7 407 47 HOH HOH . W 6 HOH L 8 408 48 HOH HOH . W 6 HOH L 9 409 49 HOH HOH . W 6 HOH L 10 410 50 HOH HOH . W 6 HOH L 11 411 51 HOH HOH . W 6 HOH L 12 412 52 HOH HOH . W 6 HOH L 13 413 53 HOH HOH . W 6 HOH L 14 414 54 HOH HOH . W 6 HOH L 15 415 55 HOH HOH . W 6 HOH L 16 416 56 HOH HOH . W 6 HOH L 17 417 57 HOH HOH . W 6 HOH L 18 418 58 HOH HOH . W 6 HOH L 19 419 59 HOH HOH . W 6 HOH L 20 420 61 HOH HOH . W 6 HOH L 21 421 62 HOH HOH . W 6 HOH L 22 422 65 HOH HOH . W 6 HOH L 23 423 73 HOH HOH . W 6 HOH L 24 424 77 HOH HOH . W 6 HOH L 25 425 78 HOH HOH . W 6 HOH L 26 426 79 HOH HOH . W 6 HOH L 27 427 81 HOH HOH . W 6 HOH L 28 428 83 HOH HOH . W 6 HOH L 29 429 84 HOH HOH . W 6 HOH L 30 430 85 HOH HOH . W 6 HOH L 31 431 99 HOH HOH . W 6 HOH L 32 432 104 HOH HOH . W 6 HOH L 33 433 105 HOH HOH . W 6 HOH L 34 434 109 HOH HOH . W 6 HOH L 35 435 110 HOH HOH . X 6 HOH H 1 401 12 HOH HOH . X 6 HOH H 2 402 9 HOH HOH . X 6 HOH H 3 403 11 HOH HOH . X 6 HOH H 4 404 34 HOH HOH . X 6 HOH H 5 405 60 HOH HOH . X 6 HOH H 6 406 66 HOH HOH . X 6 HOH H 7 407 67 HOH HOH . X 6 HOH H 8 408 68 HOH HOH . X 6 HOH H 9 409 69 HOH HOH . X 6 HOH H 10 410 70 HOH HOH . X 6 HOH H 11 411 71 HOH HOH . X 6 HOH H 12 412 72 HOH HOH . X 6 HOH H 13 413 74 HOH HOH . X 6 HOH H 14 414 75 HOH HOH . X 6 HOH H 15 415 76 HOH HOH . X 6 HOH H 16 416 80 HOH HOH . X 6 HOH H 17 417 86 HOH HOH . X 6 HOH H 18 418 88 HOH HOH . X 6 HOH H 19 419 90 HOH HOH . X 6 HOH H 20 420 91 HOH HOH . X 6 HOH H 21 421 100 HOH HOH . X 6 HOH H 22 422 107 HOH HOH . Y 6 HOH A 1 601 31 HOH HOH . Y 6 HOH A 2 602 29 HOH HOH . Y 6 HOH A 3 603 23 HOH HOH . Y 6 HOH A 4 604 46 HOH HOH . Y 6 HOH A 5 605 26 HOH HOH . Y 6 HOH A 6 606 103 HOH HOH . Y 6 HOH A 7 607 92 HOH HOH . Y 6 HOH A 8 608 17 HOH HOH . Y 6 HOH A 9 609 37 HOH HOH . Y 6 HOH A 10 610 95 HOH HOH . Y 6 HOH A 11 611 1 HOH HOH . Y 6 HOH A 12 612 2 HOH HOH . Y 6 HOH A 13 613 4 HOH HOH . Y 6 HOH A 14 614 5 HOH HOH . Y 6 HOH A 15 615 6 HOH HOH . Y 6 HOH A 16 616 10 HOH HOH . Y 6 HOH A 17 617 14 HOH HOH . Y 6 HOH A 18 618 15 HOH HOH . Y 6 HOH A 19 619 16 HOH HOH . Y 6 HOH A 20 620 20 HOH HOH . Y 6 HOH A 21 621 21 HOH HOH . Y 6 HOH A 22 622 27 HOH HOH . Y 6 HOH A 23 623 28 HOH HOH . Y 6 HOH A 24 624 32 HOH HOH . Y 6 HOH A 25 625 36 HOH HOH . Y 6 HOH A 26 626 38 HOH HOH . Y 6 HOH A 27 627 39 HOH HOH . Y 6 HOH A 28 628 40 HOH HOH . Y 6 HOH A 29 629 41 HOH HOH . Y 6 HOH A 30 630 42 HOH HOH . Y 6 HOH A 31 631 44 HOH HOH . Y 6 HOH A 32 632 45 HOH HOH . Y 6 HOH A 33 633 87 HOH HOH . Y 6 HOH A 34 634 93 HOH HOH . Y 6 HOH A 35 635 94 HOH HOH . Y 6 HOH A 36 636 96 HOH HOH . Y 6 HOH A 37 637 97 HOH HOH . Y 6 HOH A 38 638 98 HOH HOH . Y 6 HOH A 39 639 101 HOH HOH . Y 6 HOH A 40 640 102 HOH HOH . Y 6 HOH A 41 641 108 HOH HOH . Y 6 HOH A 42 642 111 HOH HOH . Y 6 HOH A 43 643 112 HOH HOH . Y 6 HOH A 44 644 113 HOH HOH . Y 6 HOH A 45 645 114 HOH HOH . Y 6 HOH A 46 646 115 HOH HOH . Y 6 HOH A 47 647 116 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 4 _atom_site.Cartn_x 15.22 _atom_site.Cartn_y 33.601 _atom_site.Cartn_z -42.775 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 508 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #