data_4XXJ
#
_model_server_result.job_id            pF-6b2deonu3VXt7vekmPQ 
_model_server_result.datetime_utc      '2024-11-23 09:20:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xxj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"KA","auth_seq_id":311}' 
#
_entry.id    4XXJ 
#
_exptl.entry_id    4XXJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.547 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            EICOSANE 
_entity.pdbx_number_of_molecules    33 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.78 
_cell.angle_gamma         90 
_cell.entry_id            4XXJ 
_cell.length_a            105.84 
_cell.length_b            60.76 
_cell.length_c            113.36 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XXJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 AA N N 
? 2 BA N N 
? 2 CA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 JA N N 
? 2 KA N N 
? 2 LA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 216 A ALA 215 1_555 A N LYR 217 A LYR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale2 A C LYR 217 A LYR 216 1_555 A N VAL 218 A VAL 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 B C ALA 216 B ALA 215 1_555 B N LYR 217 B LYR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 B C LYR 217 B LYR 216 1_555 B N VAL 218 B VAL 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 C C ALA 216 C ALA 215 1_555 C N LYR 217 C LYR 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 C C LYR 217 C LYR 216 1_555 C N VAL 218 C VAL 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
#
_chem_comp.formula           'C20 H42' 
_chem_comp.formula_weight    282.547 
_chem_comp.id                LFA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              EICOSANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 LFA sing 181 n n 
C1 H11 LFA sing 182 n n 
C1 H12 LFA sing 183 n n 
C1 H13 LFA sing 184 n n 
C2 C3 LFA sing 185 n n 
C2 H21 LFA sing 186 n n 
C2 H22 LFA sing 187 n n 
C3 C4 LFA sing 188 n n 
C3 H31 LFA sing 189 n n 
C3 H32 LFA sing 190 n n 
C4 C5 LFA sing 191 n n 
C4 H41 LFA sing 192 n n 
C4 H42 LFA sing 193 n n 
C5 C6 LFA sing 194 n n 
C5 H51 LFA sing 195 n n 
C5 H52 LFA sing 196 n n 
C6 C7 LFA sing 197 n n 
C6 H61 LFA sing 198 n n 
C6 H62 LFA sing 199 n n 
C7 C8 LFA sing 200 n n 
C7 H71 LFA sing 201 n n 
C7 H72 LFA sing 202 n n 
C8 C9 LFA sing 203 n n 
C8 H81 LFA sing 204 n n 
C8 H82 LFA sing 205 n n 
C9 C10 LFA sing 206 n n 
C9 H91 LFA sing 207 n n 
C9 H92 LFA sing 208 n n 
C10 C11 LFA sing 209 n n 
C10 H101 LFA sing 210 n n 
C10 H102 LFA sing 211 n n 
C11 C12 LFA sing 212 n n 
C11 H111 LFA sing 213 n n 
C11 H112 LFA sing 214 n n 
C12 C13 LFA sing 215 n n 
C12 H121 LFA sing 216 n n 
C12 H122 LFA sing 217 n n 
C13 C14 LFA sing 218 n n 
C13 H131 LFA sing 219 n n 
C13 H132 LFA sing 220 n n 
C14 C15 LFA sing 221 n n 
C14 H141 LFA sing 222 n n 
C14 H142 LFA sing 223 n n 
C15 C16 LFA sing 224 n n 
C15 H151 LFA sing 225 n n 
C15 H152 LFA sing 226 n n 
C16 C17 LFA sing 227 n n 
C16 H161 LFA sing 228 n n 
C16 H162 LFA sing 229 n n 
C17 C18 LFA sing 230 n n 
C17 H171 LFA sing 231 n n 
C17 H172 LFA sing 232 n n 
C18 C19 LFA sing 233 n n 
C18 H181 LFA sing 234 n n 
C18 H182 LFA sing 235 n n 
C19 C20 LFA sing 236 n n 
C19 H191 LFA sing 237 n n 
C19 H192 LFA sing 238 n n 
C20 H201 LFA sing 239 n n 
C20 H202 LFA sing 240 n n 
C20 H203 LFA sing 241 n n 
#
_atom_sites.entry_id                     4XXJ 
_atom_sites.fract_transf_matrix[1][1]    0.009448 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001628 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016458 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008951 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 LFA A 1 301 3 LFA LFA . 
E 2 LFA A 1 302 6 LFA LFA . 
F 2 LFA A 1 303 8 LFA LFA . 
G 2 LFA A 1 304 9 LFA LFA . 
H 2 LFA A 1 305 14 LFA LFA . 
I 2 LFA A 1 306 15 LFA LFA . 
J 2 LFA A 1 307 16 LFA LFA . 
K 2 LFA A 1 308 17 LFA LFA . 
L 2 LFA A 1 309 20 LFA LFA . 
M 2 LFA A 1 310 27 LFA LFA . 
N 2 LFA A 1 311 33 LFA LFA . 
O 2 LFA A 1 312 34 LFA LFA . 
P 2 LFA A 1 313 35 LFA LFA . 
Q 3 MPG A 1 314 5280 MPG MPG . 
R 2 LFA B 1 301 4 LFA LFA . 
S 2 LFA B 1 302 5 LFA LFA . 
T 2 LFA B 1 303 18 LFA LFA . 
U 2 LFA B 1 304 21 LFA LFA . 
V 2 LFA B 1 305 22 LFA LFA . 
W 2 LFA B 1 306 23 LFA LFA . 
X 2 LFA B 1 307 30 LFA LFA . 
Y 2 LFA B 1 308 32 LFA LFA . 
Z 3 MPG B 1 309 5278 MPG MPG . 
AA 2 LFA C 1 301 1 LFA LFA . 
BA 2 LFA C 1 302 2 LFA LFA . 
CA 2 LFA C 1 303 7 LFA LFA . 
DA 2 LFA C 1 304 12 LFA LFA . 
EA 2 LFA C 1 305 13 LFA LFA . 
FA 2 LFA C 1 306 24 LFA LFA . 
GA 2 LFA C 1 307 25 LFA LFA . 
HA 2 LFA C 1 308 26 LFA LFA . 
IA 2 LFA C 1 309 28 LFA LFA . 
JA 2 LFA C 1 310 29 LFA LFA . 
KA 2 LFA C 1 311 31 LFA LFA . 
LA 2 LFA C 1 312 36 LFA LFA . 
MA 3 MPG C 1 313 5279 MPG MPG . 
NA 4 HOH A 1 401 36 HOH HOH . 
NA 4 HOH A 2 402 57 HOH HOH . 
NA 4 HOH A 3 403 56 HOH HOH . 
NA 4 HOH A 4 404 1 HOH HOH . 
NA 4 HOH A 5 405 2 HOH HOH . 
NA 4 HOH A 6 406 3 HOH HOH . 
NA 4 HOH A 7 407 4 HOH HOH . 
NA 4 HOH A 8 408 5 HOH HOH . 
NA 4 HOH A 9 409 6 HOH HOH . 
NA 4 HOH A 10 410 20 HOH HOH . 
NA 4 HOH A 11 411 24 HOH HOH . 
NA 4 HOH A 12 412 25 HOH HOH . 
NA 4 HOH A 13 413 32 HOH HOH . 
NA 4 HOH A 14 414 33 HOH HOH . 
NA 4 HOH A 15 415 34 HOH HOH . 
NA 4 HOH A 16 416 35 HOH HOH . 
NA 4 HOH A 17 417 37 HOH HOH . 
NA 4 HOH A 18 418 43 HOH HOH . 
NA 4 HOH A 19 419 44 HOH HOH . 
NA 4 HOH A 20 420 47 HOH HOH . 
NA 4 HOH A 21 421 55 HOH HOH . 
NA 4 HOH A 22 422 58 HOH HOH . 
NA 4 HOH A 23 423 67 HOH HOH . 
NA 4 HOH A 24 424 73 HOH HOH . 
NA 4 HOH A 25 425 74 HOH HOH . 
NA 4 HOH A 26 426 77 HOH HOH . 
NA 4 HOH A 27 427 79 HOH HOH . 
NA 4 HOH A 28 428 81 HOH HOH . 
NA 4 HOH A 29 429 85 HOH HOH . 
NA 4 HOH A 30 430 86 HOH HOH . 
NA 4 HOH A 31 431 87 HOH HOH . 
NA 4 HOH A 32 432 91 HOH HOH . 
OA 4 HOH B 1 401 62 HOH HOH . 
OA 4 HOH B 2 402 80 HOH HOH . 
OA 4 HOH B 3 403 7 HOH HOH . 
OA 4 HOH B 4 404 8 HOH HOH . 
OA 4 HOH B 5 405 9 HOH HOH . 
OA 4 HOH B 6 406 10 HOH HOH . 
OA 4 HOH B 7 407 11 HOH HOH . 
OA 4 HOH B 8 408 19 HOH HOH . 
OA 4 HOH B 9 409 21 HOH HOH . 
OA 4 HOH B 10 410 23 HOH HOH . 
OA 4 HOH B 11 411 27 HOH HOH . 
OA 4 HOH B 12 412 28 HOH HOH . 
OA 4 HOH B 13 413 29 HOH HOH . 
OA 4 HOH B 14 414 30 HOH HOH . 
OA 4 HOH B 15 415 41 HOH HOH . 
OA 4 HOH B 16 416 42 HOH HOH . 
OA 4 HOH B 17 417 48 HOH HOH . 
OA 4 HOH B 18 418 50 HOH HOH . 
OA 4 HOH B 19 419 59 HOH HOH . 
OA 4 HOH B 20 420 61 HOH HOH . 
OA 4 HOH B 21 421 64 HOH HOH . 
OA 4 HOH B 22 422 66 HOH HOH . 
OA 4 HOH B 23 423 70 HOH HOH . 
OA 4 HOH B 24 424 75 HOH HOH . 
OA 4 HOH B 25 425 76 HOH HOH . 
OA 4 HOH B 26 426 78 HOH HOH . 
OA 4 HOH B 27 427 82 HOH HOH . 
OA 4 HOH B 28 428 84 HOH HOH . 
PA 4 HOH C 1 401 72 HOH HOH . 
PA 4 HOH C 2 402 49 HOH HOH . 
PA 4 HOH C 3 403 39 HOH HOH . 
PA 4 HOH C 4 404 63 HOH HOH . 
PA 4 HOH C 5 405 38 HOH HOH . 
PA 4 HOH C 6 406 52 HOH HOH . 
PA 4 HOH C 7 407 12 HOH HOH . 
PA 4 HOH C 8 408 14 HOH HOH . 
PA 4 HOH C 9 409 15 HOH HOH . 
PA 4 HOH C 10 410 16 HOH HOH . 
PA 4 HOH C 11 411 17 HOH HOH . 
PA 4 HOH C 12 412 18 HOH HOH . 
PA 4 HOH C 13 413 22 HOH HOH . 
PA 4 HOH C 14 414 26 HOH HOH . 
PA 4 HOH C 15 415 31 HOH HOH . 
PA 4 HOH C 16 416 40 HOH HOH . 
PA 4 HOH C 17 417 45 HOH HOH . 
PA 4 HOH C 18 418 46 HOH HOH . 
PA 4 HOH C 19 419 51 HOH HOH . 
PA 4 HOH C 20 420 53 HOH HOH . 
PA 4 HOH C 21 421 54 HOH HOH . 
PA 4 HOH C 22 422 60 HOH HOH . 
PA 4 HOH C 23 423 65 HOH HOH . 
PA 4 HOH C 24 424 68 HOH HOH . 
PA 4 HOH C 25 425 69 HOH HOH . 
PA 4 HOH C 26 426 71 HOH HOH . 
PA 4 HOH C 27 427 83 HOH HOH . 
PA 4 HOH C 28 428 88 HOH HOH . 
PA 4 HOH C 29 429 89 HOH HOH . 
PA 4 HOH C 30 430 90 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LFA . . . KA 2 -13.195 13.17 35.607 1 61.12 ? C1 LFA 311 C 1 
HETATM 2 C C2 LFA . . . KA 2 -13.526 12.436 34.322 1 60.48 ? C2 LFA 311 C 1 
HETATM 3 C C3 LFA . . . KA 2 -12.914 13.128 33.105 1 60.2 ? C3 LFA 311 C 1 
HETATM 4 C C4 LFA . . . KA 2 -11.639 12.425 32.65 1 60.93 ? C4 LFA 311 C 1 
HETATM 5 C C5 LFA . . . KA 2 -11.36 12.613 31.159 1 54.68 ? C5 LFA 311 C 1 
HETATM 6 C C6 LFA . . . KA 2 -10.987 11.284 30.506 1 54.54 ? C6 LFA 311 C 1 
HETATM 7 C C7 LFA . . . KA 2 -10.151 11.473 29.246 1 53.18 ? C7 LFA 311 C 1 
HETATM 8 C C8 LFA . . . KA 2 -11 11.317 27.987 1 57.67 ? C8 LFA 311 C 1 
HETATM 9 C C9 LFA . . . KA 2 -11.04 9.868 27.517 1 55.39 ? C9 LFA 311 C 1 
HETATM 10 C C10 LFA . . . KA 2 -12.394 9.499 26.918 1 52.21 ? C10 LFA 311 C 1 
HETATM 11 C C11 LFA . . . KA 2 -13.312 8.878 27.97 1 55.38 ? C11 LFA 311 C 1 
HETATM 12 C C12 LFA . . . KA 2 -14.237 7.81 27.384 1 51.8 ? C12 LFA 311 C 1 
HETATM 13 C C13 LFA . . . KA 2 -14.975 7.066 28.498 1 52.41 ? C13 LFA 311 C 1 
HETATM 14 C C14 LFA . . . KA 2 -15.565 5.74 28.03 1 44.99 ? C14 LFA 311 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           14 
#