data_4XYA # _model_server_result.job_id vg-9eQ7848MQCQmfcrEEPQ _model_server_result.datetime_utc '2024-12-13 03:40:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4XYA # _exptl.entry_id 4XYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 330.14 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(5-bromo-1-benzofuran-7-yl)-9H-purin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XYA _cell.length_a 37.242 _cell.length_b 44.373 _cell.length_c 79.015 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H8 Br N5 O' _chem_comp.formula_weight 330.14 _chem_comp.id 43S _chem_comp.mon_nstd_flag . _chem_comp.name 6-(5-bromo-1-benzofuran-7-yl)-9H-purin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR C11 43S sing 1 n n N C 43S sing 2 n n C N4 43S doub 3 n y C N1 43S sing 4 n y N4 C4 43S sing 5 n y C12 C11 43S doub 6 n y C12 C5 43S sing 7 n y C11 C10 43S sing 8 n y N1 C1 43S doub 9 n y C4 C5 43S sing 10 n n C4 C3 43S doub 11 n y C5 C6 43S doub 12 n y C1 C3 43S sing 13 n y C1 N2 43S sing 14 n y C10 C9 43S doub 15 n y C3 N3 43S sing 16 n y N2 C2 43S sing 17 n y C6 C9 43S sing 18 n y C6 O 43S sing 19 n y C9 C8 43S sing 20 n y N3 C2 43S doub 21 n y O C7 43S sing 22 n y C8 C7 43S doub 23 n y C7 H1 43S sing 24 n n C8 H2 43S sing 25 n n C10 H3 43S sing 26 n n C12 H4 43S sing 27 n n N2 H5 43S sing 28 n n N H7 43S sing 29 n n N H8 43S sing 30 n n C2 H9 43S sing 31 n n # _atom_sites.entry_id 4XYA _atom_sites.fract_transf_matrix[1][1] 0.026851 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 43S A 1 201 1 43S DRG . C 3 EDO A 1 202 1 EDO EDO . D 4 HOH A 1 301 95 HOH HOH . D 4 HOH A 2 302 137 HOH HOH . D 4 HOH A 3 303 61 HOH HOH . D 4 HOH A 4 304 178 HOH HOH . D 4 HOH A 5 305 83 HOH HOH . D 4 HOH A 6 306 99 HOH HOH . D 4 HOH A 7 307 84 HOH HOH . D 4 HOH A 8 308 54 HOH HOH . D 4 HOH A 9 309 2 HOH HOH . D 4 HOH A 10 310 103 HOH HOH . D 4 HOH A 11 311 98 HOH HOH . D 4 HOH A 12 312 161 HOH HOH . D 4 HOH A 13 313 169 HOH HOH . D 4 HOH A 14 314 40 HOH HOH . D 4 HOH A 15 315 73 HOH HOH . D 4 HOH A 16 316 23 HOH HOH . D 4 HOH A 17 317 170 HOH HOH . D 4 HOH A 18 318 13 HOH HOH . D 4 HOH A 19 319 114 HOH HOH . D 4 HOH A 20 320 158 HOH HOH . D 4 HOH A 21 321 11 HOH HOH . D 4 HOH A 22 322 9 HOH HOH . D 4 HOH A 23 323 64 HOH HOH . D 4 HOH A 24 324 17 HOH HOH . D 4 HOH A 25 325 88 HOH HOH . D 4 HOH A 26 326 57 HOH HOH . D 4 HOH A 27 327 115 HOH HOH . D 4 HOH A 28 328 147 HOH HOH . D 4 HOH A 29 329 144 HOH HOH . D 4 HOH A 30 330 151 HOH HOH . D 4 HOH A 31 331 65 HOH HOH . D 4 HOH A 32 332 80 HOH HOH . D 4 HOH A 33 333 76 HOH HOH . D 4 HOH A 34 334 119 HOH HOH . D 4 HOH A 35 335 91 HOH HOH . D 4 HOH A 36 336 140 HOH HOH . D 4 HOH A 37 337 19 HOH HOH . D 4 HOH A 38 338 132 HOH HOH . D 4 HOH A 39 339 78 HOH HOH . D 4 HOH A 40 340 101 HOH HOH . D 4 HOH A 41 341 141 HOH HOH . D 4 HOH A 42 342 27 HOH HOH . D 4 HOH A 43 343 175 HOH HOH . D 4 HOH A 44 344 127 HOH HOH . D 4 HOH A 45 345 37 HOH HOH . D 4 HOH A 46 346 41 HOH HOH . D 4 HOH A 47 347 53 HOH HOH . D 4 HOH A 48 348 68 HOH HOH . D 4 HOH A 49 349 159 HOH HOH . D 4 HOH A 50 350 56 HOH HOH . D 4 HOH A 51 351 136 HOH HOH . D 4 HOH A 52 352 152 HOH HOH . D 4 HOH A 53 353 96 HOH HOH . D 4 HOH A 54 354 116 HOH HOH . D 4 HOH A 55 355 143 HOH HOH . D 4 HOH A 56 356 150 HOH HOH . D 4 HOH A 57 357 157 HOH HOH . D 4 HOH A 58 358 130 HOH HOH . D 4 HOH A 59 359 134 HOH HOH . D 4 HOH A 60 360 145 HOH HOH . D 4 HOH A 61 361 122 HOH HOH . D 4 HOH A 62 362 87 HOH HOH . D 4 HOH A 63 363 142 HOH HOH . D 4 HOH A 64 364 172 HOH HOH . D 4 HOH A 65 365 74 HOH HOH . D 4 HOH A 66 366 154 HOH HOH . D 4 HOH A 67 367 36 HOH HOH . D 4 HOH A 68 368 135 HOH HOH . D 4 HOH A 69 369 92 HOH HOH . D 4 HOH A 70 370 100 HOH HOH . D 4 HOH A 71 371 155 HOH HOH . D 4 HOH A 72 372 166 HOH HOH . D 4 HOH A 73 373 77 HOH HOH . D 4 HOH A 74 374 117 HOH HOH . D 4 HOH A 75 375 81 HOH HOH . D 4 HOH A 76 376 177 HOH HOH . D 4 HOH A 77 377 3 HOH HOH . D 4 HOH A 78 378 4 HOH HOH . D 4 HOH A 79 379 5 HOH HOH . D 4 HOH A 80 380 6 HOH HOH . D 4 HOH A 81 381 7 HOH HOH . D 4 HOH A 82 382 10 HOH HOH . D 4 HOH A 83 383 12 HOH HOH . D 4 HOH A 84 384 14 HOH HOH . D 4 HOH A 85 385 15 HOH HOH . D 4 HOH A 86 386 16 HOH HOH . D 4 HOH A 87 387 18 HOH HOH . D 4 HOH A 88 388 21 HOH HOH . D 4 HOH A 89 389 22 HOH HOH . D 4 HOH A 90 390 24 HOH HOH . D 4 HOH A 91 391 26 HOH HOH . D 4 HOH A 92 392 28 HOH HOH . D 4 HOH A 93 393 29 HOH HOH . D 4 HOH A 94 394 30 HOH HOH . D 4 HOH A 95 395 31 HOH HOH . D 4 HOH A 96 396 32 HOH HOH . D 4 HOH A 97 397 33 HOH HOH . D 4 HOH A 98 398 35 HOH HOH . D 4 HOH A 99 399 42 HOH HOH . D 4 HOH A 100 400 45 HOH HOH . D 4 HOH A 101 401 48 HOH HOH . D 4 HOH A 102 402 51 HOH HOH . D 4 HOH A 103 403 55 HOH HOH . D 4 HOH A 104 404 58 HOH HOH . D 4 HOH A 105 405 59 HOH HOH . D 4 HOH A 106 406 60 HOH HOH . D 4 HOH A 107 407 63 HOH HOH . D 4 HOH A 108 408 67 HOH HOH . D 4 HOH A 109 409 71 HOH HOH . D 4 HOH A 110 410 86 HOH HOH . D 4 HOH A 111 411 89 HOH HOH . D 4 HOH A 112 412 93 HOH HOH . D 4 HOH A 113 413 94 HOH HOH . D 4 HOH A 114 414 97 HOH HOH . D 4 HOH A 115 415 105 HOH HOH . D 4 HOH A 116 416 109 HOH HOH . D 4 HOH A 117 417 110 HOH HOH . D 4 HOH A 118 418 111 HOH HOH . D 4 HOH A 119 419 112 HOH HOH . D 4 HOH A 120 420 118 HOH HOH . D 4 HOH A 121 421 120 HOH HOH . D 4 HOH A 122 422 121 HOH HOH . D 4 HOH A 123 423 123 HOH HOH . D 4 HOH A 124 424 124 HOH HOH . D 4 HOH A 125 425 125 HOH HOH . D 4 HOH A 126 426 126 HOH HOH . D 4 HOH A 127 427 128 HOH HOH . D 4 HOH A 128 428 129 HOH HOH . D 4 HOH A 129 429 131 HOH HOH . D 4 HOH A 130 430 133 HOH HOH . D 4 HOH A 131 431 138 HOH HOH . D 4 HOH A 132 432 139 HOH HOH . D 4 HOH A 133 433 146 HOH HOH . D 4 HOH A 134 434 148 HOH HOH . D 4 HOH A 135 435 149 HOH HOH . D 4 HOH A 136 436 153 HOH HOH . D 4 HOH A 137 437 156 HOH HOH . D 4 HOH A 138 438 160 HOH HOH . D 4 HOH A 139 439 162 HOH HOH . D 4 HOH A 140 440 163 HOH HOH . D 4 HOH A 141 441 164 HOH HOH . D 4 HOH A 142 442 165 HOH HOH . D 4 HOH A 143 443 167 HOH HOH . D 4 HOH A 144 444 168 HOH HOH . D 4 HOH A 145 445 171 HOH HOH . D 4 HOH A 146 446 173 HOH HOH . D 4 HOH A 147 447 174 HOH HOH . D 4 HOH A 148 448 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 43S . . . B 2 -7.109 15.925 -0.029 1 7.39 ? C4 43S 201 A 1 HETATM 2 C C5 43S . . . B 2 -8.476 15.506 0.203 1 8.83 ? C5 43S 201 A 1 HETATM 3 C C6 43S . . . B 2 -9.141 15.577 1.394 1 8.35 ? C6 43S 201 A 1 HETATM 4 C C11 43S . . . B 2 -10.465 14.476 -0.714 1 10.3 ? C11 43S 201 A 1 HETATM 5 C C7 43S . . . B 2 -9.58 15.769 3.616 1 8.77 ? C7 43S 201 A 1 HETATM 6 C C8 43S . . . B 2 -10.954 15.404 2.968 1 9.02 ? C8 43S 201 A 1 HETATM 7 C C9 43S . . . B 2 -10.515 15.168 1.532 1 10.48 ? C9 43S 201 A 1 HETATM 8 C C10 43S . . . B 2 -11.185 14.612 0.45 1 8.97 ? C10 43S 201 A 1 HETATM 9 C C12 43S . . . B 2 -9.179 14.906 -0.885 1 10.02 ? C12 43S 201 A 1 HETATM 10 N N1 43S . . . B 2 -4.351 16.674 -0.512 1 7.36 ? N1 43S 201 A 1 HETATM 11 N N2 43S . . . B 2 -4.835 18.353 1.179 1 9.65 ? N2 43S 201 A 1 HETATM 12 C C3 43S . . . B 2 -6.527 16.962 0.715 1 8.93 ? C3 43S 201 A 1 HETATM 13 N N3 43S . . . B 2 -7.014 17.837 1.722 1 9.41 ? N3 43S 201 A 1 HETATM 14 BR BR 43S . . . B 2 -11.286 13.613 -2.267 1 17.63 ? BR 43S 201 A 1 HETATM 15 O O 43S . . . B 2 -8.579 15.86 2.567 1 8.58 ? O 43S 201 A 1 HETATM 16 N N4 43S . . . B 2 -6.409 15.258 -0.987 1 6.39 ? N4 43S 201 A 1 HETATM 17 C C 43S . . . B 2 -5.054 15.666 -1.173 1 7.74 ? C 43S 201 A 1 HETATM 18 N N 43S . . . B 2 -4.308 14.958 -2.14 1 6.46 ? N 43S 201 A 1 HETATM 19 C C1 43S . . . B 2 -5.156 17.287 0.401 1 9.59 ? C1 43S 201 A 1 HETATM 20 C C2 43S . . . B 2 -5.944 18.647 1.955 1 10.26 ? C2 43S 201 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #