data_4XYA # _model_server_result.job_id 0bOo5HhS5307UkuU-R7q1Q _model_server_result.datetime_utc '2024-12-03 12:08:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4XYA # _exptl.entry_id 4XYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XYA _cell.length_a 37.242 _cell.length_b 44.373 _cell.length_c 79.015 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 114 n n C1 C2 EDO sing 115 n n C1 H11 EDO sing 116 n n C1 H12 EDO sing 117 n n O1 HO1 EDO sing 118 n n C2 O2 EDO sing 119 n n C2 H21 EDO sing 120 n n C2 H22 EDO sing 121 n n O2 HO2 EDO sing 122 n n # _atom_sites.entry_id 4XYA _atom_sites.fract_transf_matrix[1][1] 0.026851 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 43S A 1 201 1 43S DRG . C 3 EDO A 1 202 1 EDO EDO . D 4 HOH A 1 301 95 HOH HOH . D 4 HOH A 2 302 137 HOH HOH . D 4 HOH A 3 303 61 HOH HOH . D 4 HOH A 4 304 178 HOH HOH . D 4 HOH A 5 305 83 HOH HOH . D 4 HOH A 6 306 99 HOH HOH . D 4 HOH A 7 307 84 HOH HOH . D 4 HOH A 8 308 54 HOH HOH . D 4 HOH A 9 309 2 HOH HOH . D 4 HOH A 10 310 103 HOH HOH . D 4 HOH A 11 311 98 HOH HOH . D 4 HOH A 12 312 161 HOH HOH . D 4 HOH A 13 313 169 HOH HOH . D 4 HOH A 14 314 40 HOH HOH . D 4 HOH A 15 315 73 HOH HOH . D 4 HOH A 16 316 23 HOH HOH . D 4 HOH A 17 317 170 HOH HOH . D 4 HOH A 18 318 13 HOH HOH . D 4 HOH A 19 319 114 HOH HOH . D 4 HOH A 20 320 158 HOH HOH . D 4 HOH A 21 321 11 HOH HOH . D 4 HOH A 22 322 9 HOH HOH . D 4 HOH A 23 323 64 HOH HOH . D 4 HOH A 24 324 17 HOH HOH . D 4 HOH A 25 325 88 HOH HOH . D 4 HOH A 26 326 57 HOH HOH . D 4 HOH A 27 327 115 HOH HOH . D 4 HOH A 28 328 147 HOH HOH . D 4 HOH A 29 329 144 HOH HOH . D 4 HOH A 30 330 151 HOH HOH . D 4 HOH A 31 331 65 HOH HOH . D 4 HOH A 32 332 80 HOH HOH . D 4 HOH A 33 333 76 HOH HOH . D 4 HOH A 34 334 119 HOH HOH . D 4 HOH A 35 335 91 HOH HOH . D 4 HOH A 36 336 140 HOH HOH . D 4 HOH A 37 337 19 HOH HOH . D 4 HOH A 38 338 132 HOH HOH . D 4 HOH A 39 339 78 HOH HOH . D 4 HOH A 40 340 101 HOH HOH . D 4 HOH A 41 341 141 HOH HOH . D 4 HOH A 42 342 27 HOH HOH . D 4 HOH A 43 343 175 HOH HOH . D 4 HOH A 44 344 127 HOH HOH . D 4 HOH A 45 345 37 HOH HOH . D 4 HOH A 46 346 41 HOH HOH . D 4 HOH A 47 347 53 HOH HOH . D 4 HOH A 48 348 68 HOH HOH . D 4 HOH A 49 349 159 HOH HOH . D 4 HOH A 50 350 56 HOH HOH . D 4 HOH A 51 351 136 HOH HOH . D 4 HOH A 52 352 152 HOH HOH . D 4 HOH A 53 353 96 HOH HOH . D 4 HOH A 54 354 116 HOH HOH . D 4 HOH A 55 355 143 HOH HOH . D 4 HOH A 56 356 150 HOH HOH . D 4 HOH A 57 357 157 HOH HOH . D 4 HOH A 58 358 130 HOH HOH . D 4 HOH A 59 359 134 HOH HOH . D 4 HOH A 60 360 145 HOH HOH . D 4 HOH A 61 361 122 HOH HOH . D 4 HOH A 62 362 87 HOH HOH . D 4 HOH A 63 363 142 HOH HOH . D 4 HOH A 64 364 172 HOH HOH . D 4 HOH A 65 365 74 HOH HOH . D 4 HOH A 66 366 154 HOH HOH . D 4 HOH A 67 367 36 HOH HOH . D 4 HOH A 68 368 135 HOH HOH . D 4 HOH A 69 369 92 HOH HOH . D 4 HOH A 70 370 100 HOH HOH . D 4 HOH A 71 371 155 HOH HOH . D 4 HOH A 72 372 166 HOH HOH . D 4 HOH A 73 373 77 HOH HOH . D 4 HOH A 74 374 117 HOH HOH . D 4 HOH A 75 375 81 HOH HOH . D 4 HOH A 76 376 177 HOH HOH . D 4 HOH A 77 377 3 HOH HOH . D 4 HOH A 78 378 4 HOH HOH . D 4 HOH A 79 379 5 HOH HOH . D 4 HOH A 80 380 6 HOH HOH . D 4 HOH A 81 381 7 HOH HOH . D 4 HOH A 82 382 10 HOH HOH . D 4 HOH A 83 383 12 HOH HOH . D 4 HOH A 84 384 14 HOH HOH . D 4 HOH A 85 385 15 HOH HOH . D 4 HOH A 86 386 16 HOH HOH . D 4 HOH A 87 387 18 HOH HOH . D 4 HOH A 88 388 21 HOH HOH . D 4 HOH A 89 389 22 HOH HOH . D 4 HOH A 90 390 24 HOH HOH . D 4 HOH A 91 391 26 HOH HOH . D 4 HOH A 92 392 28 HOH HOH . D 4 HOH A 93 393 29 HOH HOH . D 4 HOH A 94 394 30 HOH HOH . D 4 HOH A 95 395 31 HOH HOH . D 4 HOH A 96 396 32 HOH HOH . D 4 HOH A 97 397 33 HOH HOH . D 4 HOH A 98 398 35 HOH HOH . D 4 HOH A 99 399 42 HOH HOH . D 4 HOH A 100 400 45 HOH HOH . D 4 HOH A 101 401 48 HOH HOH . D 4 HOH A 102 402 51 HOH HOH . D 4 HOH A 103 403 55 HOH HOH . D 4 HOH A 104 404 58 HOH HOH . D 4 HOH A 105 405 59 HOH HOH . D 4 HOH A 106 406 60 HOH HOH . D 4 HOH A 107 407 63 HOH HOH . D 4 HOH A 108 408 67 HOH HOH . D 4 HOH A 109 409 71 HOH HOH . D 4 HOH A 110 410 86 HOH HOH . D 4 HOH A 111 411 89 HOH HOH . D 4 HOH A 112 412 93 HOH HOH . D 4 HOH A 113 413 94 HOH HOH . D 4 HOH A 114 414 97 HOH HOH . D 4 HOH A 115 415 105 HOH HOH . D 4 HOH A 116 416 109 HOH HOH . D 4 HOH A 117 417 110 HOH HOH . D 4 HOH A 118 418 111 HOH HOH . D 4 HOH A 119 419 112 HOH HOH . D 4 HOH A 120 420 118 HOH HOH . D 4 HOH A 121 421 120 HOH HOH . D 4 HOH A 122 422 121 HOH HOH . D 4 HOH A 123 423 123 HOH HOH . D 4 HOH A 124 424 124 HOH HOH . D 4 HOH A 125 425 125 HOH HOH . D 4 HOH A 126 426 126 HOH HOH . D 4 HOH A 127 427 128 HOH HOH . D 4 HOH A 128 428 129 HOH HOH . D 4 HOH A 129 429 131 HOH HOH . D 4 HOH A 130 430 133 HOH HOH . D 4 HOH A 131 431 138 HOH HOH . D 4 HOH A 132 432 139 HOH HOH . D 4 HOH A 133 433 146 HOH HOH . D 4 HOH A 134 434 148 HOH HOH . D 4 HOH A 135 435 149 HOH HOH . D 4 HOH A 136 436 153 HOH HOH . D 4 HOH A 137 437 156 HOH HOH . D 4 HOH A 138 438 160 HOH HOH . D 4 HOH A 139 439 162 HOH HOH . D 4 HOH A 140 440 163 HOH HOH . D 4 HOH A 141 441 164 HOH HOH . D 4 HOH A 142 442 165 HOH HOH . D 4 HOH A 143 443 167 HOH HOH . D 4 HOH A 144 444 168 HOH HOH . D 4 HOH A 145 445 171 HOH HOH . D 4 HOH A 146 446 173 HOH HOH . D 4 HOH A 147 447 174 HOH HOH . D 4 HOH A 148 448 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 4.834 20.572 7.155 1 20.16 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . C 3 3.693 19.823 7.613 1 12.13 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . C 3 5.874 19.756 6.383 1 18.63 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . C 3 6.296 18.647 7.153 1 16.77 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #