data_4XYX # _model_server_result.job_id 0XROeVUEQCLD1qH7UrqYkQ _model_server_result.datetime_utc '2024-10-13 04:19:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":712}' # _entry.id 4XYX # _exptl.entry_id 4XYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4XYX _cell.length_a 75.603 _cell.length_b 82.648 _cell.length_c 116.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 295 n n P O2 PO4 sing 296 n n P O3 PO4 sing 297 n n P O4 PO4 sing 298 n n # _atom_sites.entry_id 4XYX _atom_sites.fract_transf_matrix[1][1] 0.013227 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 43Z A 1 701 1 43Z DRG . C 3 PO4 A 1 702 1 PO4 PO4 . D 3 PO4 A 1 703 2 PO4 PO4 . E 3 PO4 A 1 704 4 PO4 PO4 . F 3 PO4 A 1 705 5 PO4 PO4 . G 3 PO4 A 1 706 6 PO4 PO4 . H 3 PO4 A 1 707 7 PO4 PO4 . I 3 PO4 A 1 708 8 PO4 PO4 . J 3 PO4 A 1 709 9 PO4 PO4 . K 3 PO4 A 1 710 10 PO4 PO4 . L 3 PO4 A 1 711 11 PO4 PO4 . M 3 PO4 A 1 712 12 PO4 PO4 . N 3 PO4 A 1 713 13 PO4 PO4 . O 3 PO4 A 1 714 14 PO4 PO4 . P 3 PO4 A 1 715 15 PO4 PO4 . Q 3 PO4 A 1 716 16 PO4 PO4 . R 3 PO4 A 1 717 17 PO4 PO4 . S 3 PO4 A 1 718 18 PO4 PO4 . T 3 PO4 A 1 719 20 PO4 PO4 . U 4 HOH A 1 801 121 HOH HOH . U 4 HOH A 2 802 87 HOH HOH . U 4 HOH A 3 803 490 HOH HOH . U 4 HOH A 4 804 148 HOH HOH . U 4 HOH A 5 805 58 HOH HOH . U 4 HOH A 6 806 140 HOH HOH . U 4 HOH A 7 807 281 HOH HOH . U 4 HOH A 8 808 266 HOH HOH . U 4 HOH A 9 809 498 HOH HOH . U 4 HOH A 10 810 102 HOH HOH . U 4 HOH A 11 811 272 HOH HOH . U 4 HOH A 12 812 90 HOH HOH . U 4 HOH A 13 813 60 HOH HOH . U 4 HOH A 14 814 284 HOH HOH . U 4 HOH A 15 815 82 HOH HOH . U 4 HOH A 16 816 116 HOH HOH . U 4 HOH A 17 817 64 HOH HOH . U 4 HOH A 18 818 125 HOH HOH . U 4 HOH A 19 819 240 HOH HOH . U 4 HOH A 20 820 136 HOH HOH . U 4 HOH A 21 821 168 HOH HOH . U 4 HOH A 22 822 500 HOH HOH . U 4 HOH A 23 823 316 HOH HOH . U 4 HOH A 24 824 55 HOH HOH . U 4 HOH A 25 825 76 HOH HOH . U 4 HOH A 26 826 141 HOH HOH . U 4 HOH A 27 827 217 HOH HOH . U 4 HOH A 28 828 189 HOH HOH . U 4 HOH A 29 829 214 HOH HOH . U 4 HOH A 30 830 147 HOH HOH . U 4 HOH A 31 831 238 HOH HOH . U 4 HOH A 32 832 225 HOH HOH . U 4 HOH A 33 833 72 HOH HOH . U 4 HOH A 34 834 120 HOH HOH . U 4 HOH A 35 835 479 HOH HOH . U 4 HOH A 36 836 207 HOH HOH . U 4 HOH A 37 837 487 HOH HOH . U 4 HOH A 38 838 66 HOH HOH . U 4 HOH A 39 839 115 HOH HOH . U 4 HOH A 40 840 164 HOH HOH . U 4 HOH A 41 841 130 HOH HOH . U 4 HOH A 42 842 230 HOH HOH . U 4 HOH A 43 843 219 HOH HOH . U 4 HOH A 44 844 485 HOH HOH . U 4 HOH A 45 845 308 HOH HOH . U 4 HOH A 46 846 11 HOH HOH . U 4 HOH A 47 847 95 HOH HOH . U 4 HOH A 48 848 452 HOH HOH . U 4 HOH A 49 849 339 HOH HOH . U 4 HOH A 50 850 437 HOH HOH . U 4 HOH A 51 851 495 HOH HOH . U 4 HOH A 52 852 215 HOH HOH . U 4 HOH A 53 853 232 HOH HOH . U 4 HOH A 54 854 497 HOH HOH . U 4 HOH A 55 855 491 HOH HOH . U 4 HOH A 56 856 494 HOH HOH . U 4 HOH A 57 857 443 HOH HOH . U 4 HOH A 58 858 480 HOH HOH . U 4 HOH A 59 859 499 HOH HOH . U 4 HOH A 60 860 489 HOH HOH . U 4 HOH A 61 861 1 HOH HOH . U 4 HOH A 62 862 2 HOH HOH . U 4 HOH A 63 863 3 HOH HOH . U 4 HOH A 64 864 4 HOH HOH . U 4 HOH A 65 865 5 HOH HOH . U 4 HOH A 66 866 6 HOH HOH . U 4 HOH A 67 867 7 HOH HOH . U 4 HOH A 68 868 8 HOH HOH . U 4 HOH A 69 869 9 HOH HOH . U 4 HOH A 70 870 10 HOH HOH . U 4 HOH A 71 871 12 HOH HOH . U 4 HOH A 72 872 13 HOH HOH . U 4 HOH A 73 873 14 HOH HOH . U 4 HOH A 74 874 15 HOH HOH . U 4 HOH A 75 875 16 HOH HOH . U 4 HOH A 76 876 17 HOH HOH . U 4 HOH A 77 877 18 HOH HOH . U 4 HOH A 78 878 19 HOH HOH . U 4 HOH A 79 879 20 HOH HOH . U 4 HOH A 80 880 21 HOH HOH . U 4 HOH A 81 881 22 HOH HOH . U 4 HOH A 82 882 23 HOH HOH . U 4 HOH A 83 883 24 HOH HOH . U 4 HOH A 84 884 25 HOH HOH . U 4 HOH A 85 885 26 HOH HOH . U 4 HOH A 86 886 27 HOH HOH . U 4 HOH A 87 887 28 HOH HOH . U 4 HOH A 88 888 29 HOH HOH . U 4 HOH A 89 889 30 HOH HOH . U 4 HOH A 90 890 31 HOH HOH . U 4 HOH A 91 891 32 HOH HOH . U 4 HOH A 92 892 33 HOH HOH . U 4 HOH A 93 893 34 HOH HOH . U 4 HOH A 94 894 35 HOH HOH . U 4 HOH A 95 895 36 HOH HOH . U 4 HOH A 96 896 38 HOH HOH . U 4 HOH A 97 897 39 HOH HOH . U 4 HOH A 98 898 40 HOH HOH . U 4 HOH A 99 899 41 HOH HOH . U 4 HOH A 100 900 42 HOH HOH . U 4 HOH A 101 901 43 HOH HOH . U 4 HOH A 102 902 44 HOH HOH . U 4 HOH A 103 903 45 HOH HOH . U 4 HOH A 104 904 46 HOH HOH . U 4 HOH A 105 905 47 HOH HOH . U 4 HOH A 106 906 48 HOH HOH . U 4 HOH A 107 907 49 HOH HOH . U 4 HOH A 108 908 50 HOH HOH . U 4 HOH A 109 909 52 HOH HOH . U 4 HOH A 110 910 53 HOH HOH . U 4 HOH A 111 911 56 HOH HOH . U 4 HOH A 112 912 57 HOH HOH . U 4 HOH A 113 913 59 HOH HOH . U 4 HOH A 114 914 61 HOH HOH . U 4 HOH A 115 915 62 HOH HOH . U 4 HOH A 116 916 63 HOH HOH . U 4 HOH A 117 917 65 HOH HOH . U 4 HOH A 118 918 67 HOH HOH . U 4 HOH A 119 919 68 HOH HOH . U 4 HOH A 120 920 69 HOH HOH . U 4 HOH A 121 921 70 HOH HOH . U 4 HOH A 122 922 71 HOH HOH . U 4 HOH A 123 923 73 HOH HOH . U 4 HOH A 124 924 74 HOH HOH . U 4 HOH A 125 925 75 HOH HOH . U 4 HOH A 126 926 77 HOH HOH . U 4 HOH A 127 927 78 HOH HOH . U 4 HOH A 128 928 79 HOH HOH . U 4 HOH A 129 929 80 HOH HOH . U 4 HOH A 130 930 81 HOH HOH . U 4 HOH A 131 931 83 HOH HOH . U 4 HOH A 132 932 84 HOH HOH . U 4 HOH A 133 933 85 HOH HOH . U 4 HOH A 134 934 86 HOH HOH . U 4 HOH A 135 935 88 HOH HOH . U 4 HOH A 136 936 89 HOH HOH . U 4 HOH A 137 937 91 HOH HOH . U 4 HOH A 138 938 92 HOH HOH . U 4 HOH A 139 939 93 HOH HOH . U 4 HOH A 140 940 94 HOH HOH . U 4 HOH A 141 941 96 HOH HOH . U 4 HOH A 142 942 97 HOH HOH . U 4 HOH A 143 943 98 HOH HOH . U 4 HOH A 144 944 99 HOH HOH . U 4 HOH A 145 945 101 HOH HOH . U 4 HOH A 146 946 103 HOH HOH . U 4 HOH A 147 947 104 HOH HOH . U 4 HOH A 148 948 105 HOH HOH . U 4 HOH A 149 949 106 HOH HOH . U 4 HOH A 150 950 107 HOH HOH . U 4 HOH A 151 951 108 HOH HOH . U 4 HOH A 152 952 110 HOH HOH . U 4 HOH A 153 953 111 HOH HOH . U 4 HOH A 154 954 112 HOH HOH . U 4 HOH A 155 955 113 HOH HOH . U 4 HOH A 156 956 114 HOH HOH . U 4 HOH A 157 957 117 HOH HOH . U 4 HOH A 158 958 118 HOH HOH . U 4 HOH A 159 959 119 HOH HOH . U 4 HOH A 160 960 122 HOH HOH . U 4 HOH A 161 961 123 HOH HOH . U 4 HOH A 162 962 124 HOH HOH . U 4 HOH A 163 963 126 HOH HOH . U 4 HOH A 164 964 127 HOH HOH . U 4 HOH A 165 965 128 HOH HOH . U 4 HOH A 166 966 129 HOH HOH . U 4 HOH A 167 967 131 HOH HOH . U 4 HOH A 168 968 132 HOH HOH . U 4 HOH A 169 969 133 HOH HOH . U 4 HOH A 170 970 135 HOH HOH . U 4 HOH A 171 971 137 HOH HOH . U 4 HOH A 172 972 138 HOH HOH . U 4 HOH A 173 973 139 HOH HOH . U 4 HOH A 174 974 142 HOH HOH . U 4 HOH A 175 975 143 HOH HOH . U 4 HOH A 176 976 144 HOH HOH . U 4 HOH A 177 977 146 HOH HOH . U 4 HOH A 178 978 149 HOH HOH . U 4 HOH A 179 979 150 HOH HOH . U 4 HOH A 180 980 152 HOH HOH . U 4 HOH A 181 981 154 HOH HOH . U 4 HOH A 182 982 156 HOH HOH . U 4 HOH A 183 983 159 HOH HOH . U 4 HOH A 184 984 160 HOH HOH . U 4 HOH A 185 985 161 HOH HOH . U 4 HOH A 186 986 162 HOH HOH . U 4 HOH A 187 987 163 HOH HOH . U 4 HOH A 188 988 166 HOH HOH . U 4 HOH A 189 989 167 HOH HOH . U 4 HOH A 190 990 173 HOH HOH . U 4 HOH A 191 991 174 HOH HOH . U 4 HOH A 192 992 175 HOH HOH . U 4 HOH A 193 993 176 HOH HOH . U 4 HOH A 194 994 179 HOH HOH . U 4 HOH A 195 995 180 HOH HOH . U 4 HOH A 196 996 182 HOH HOH . U 4 HOH A 197 997 183 HOH HOH . U 4 HOH A 198 998 184 HOH HOH . U 4 HOH A 199 999 186 HOH HOH . U 4 HOH A 200 1000 192 HOH HOH . U 4 HOH A 201 1001 193 HOH HOH . U 4 HOH A 202 1002 201 HOH HOH . U 4 HOH A 203 1003 208 HOH HOH . U 4 HOH A 204 1004 210 HOH HOH . U 4 HOH A 205 1005 211 HOH HOH . U 4 HOH A 206 1006 218 HOH HOH . U 4 HOH A 207 1007 220 HOH HOH . U 4 HOH A 208 1008 221 HOH HOH . U 4 HOH A 209 1009 222 HOH HOH . U 4 HOH A 210 1010 226 HOH HOH . U 4 HOH A 211 1011 228 HOH HOH . U 4 HOH A 212 1012 229 HOH HOH . U 4 HOH A 213 1013 233 HOH HOH . U 4 HOH A 214 1014 234 HOH HOH . U 4 HOH A 215 1015 237 HOH HOH . U 4 HOH A 216 1016 241 HOH HOH . U 4 HOH A 217 1017 243 HOH HOH . U 4 HOH A 218 1018 245 HOH HOH . U 4 HOH A 219 1019 248 HOH HOH . U 4 HOH A 220 1020 249 HOH HOH . U 4 HOH A 221 1021 254 HOH HOH . U 4 HOH A 222 1022 256 HOH HOH . U 4 HOH A 223 1023 261 HOH HOH . U 4 HOH A 224 1024 262 HOH HOH . U 4 HOH A 225 1025 264 HOH HOH . U 4 HOH A 226 1026 271 HOH HOH . U 4 HOH A 227 1027 273 HOH HOH . U 4 HOH A 228 1028 277 HOH HOH . U 4 HOH A 229 1029 278 HOH HOH . U 4 HOH A 230 1030 279 HOH HOH . U 4 HOH A 231 1031 280 HOH HOH . U 4 HOH A 232 1032 283 HOH HOH . U 4 HOH A 233 1033 296 HOH HOH . U 4 HOH A 234 1034 299 HOH HOH . U 4 HOH A 235 1035 301 HOH HOH . U 4 HOH A 236 1036 319 HOH HOH . U 4 HOH A 237 1037 322 HOH HOH . U 4 HOH A 238 1038 371 HOH HOH . U 4 HOH A 239 1039 372 HOH HOH . U 4 HOH A 240 1040 391 HOH HOH . U 4 HOH A 241 1041 432 HOH HOH . U 4 HOH A 242 1042 433 HOH HOH . U 4 HOH A 243 1043 435 HOH HOH . U 4 HOH A 244 1044 436 HOH HOH . U 4 HOH A 245 1045 438 HOH HOH . U 4 HOH A 246 1046 441 HOH HOH . U 4 HOH A 247 1047 446 HOH HOH . U 4 HOH A 248 1048 447 HOH HOH . U 4 HOH A 249 1049 450 HOH HOH . U 4 HOH A 250 1050 453 HOH HOH . U 4 HOH A 251 1051 454 HOH HOH . U 4 HOH A 252 1052 455 HOH HOH . U 4 HOH A 253 1053 456 HOH HOH . U 4 HOH A 254 1054 457 HOH HOH . U 4 HOH A 255 1055 458 HOH HOH . U 4 HOH A 256 1056 459 HOH HOH . U 4 HOH A 257 1057 460 HOH HOH . U 4 HOH A 258 1058 461 HOH HOH . U 4 HOH A 259 1059 462 HOH HOH . U 4 HOH A 260 1060 463 HOH HOH . U 4 HOH A 261 1061 464 HOH HOH . U 4 HOH A 262 1062 465 HOH HOH . U 4 HOH A 263 1063 466 HOH HOH . U 4 HOH A 264 1064 467 HOH HOH . U 4 HOH A 265 1065 468 HOH HOH . U 4 HOH A 266 1066 469 HOH HOH . U 4 HOH A 267 1067 470 HOH HOH . U 4 HOH A 268 1068 471 HOH HOH . U 4 HOH A 269 1069 472 HOH HOH . U 4 HOH A 270 1070 473 HOH HOH . U 4 HOH A 271 1071 474 HOH HOH . U 4 HOH A 272 1072 475 HOH HOH . U 4 HOH A 273 1073 476 HOH HOH . U 4 HOH A 274 1074 477 HOH HOH . U 4 HOH A 275 1075 478 HOH HOH . U 4 HOH A 276 1076 481 HOH HOH . U 4 HOH A 277 1077 482 HOH HOH . U 4 HOH A 278 1078 483 HOH HOH . U 4 HOH A 279 1079 484 HOH HOH . U 4 HOH A 280 1080 486 HOH HOH . U 4 HOH A 281 1081 488 HOH HOH . U 4 HOH A 282 1082 492 HOH HOH . U 4 HOH A 283 1083 493 HOH HOH . U 4 HOH A 284 1084 501 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . M 3 -3.655 -4.115 65.087 1 66.3 ? P PO4 712 A 1 HETATM 2 O O1 PO4 . . . M 3 -2.884 -5.178 64.368 1 60.88 ? O1 PO4 712 A 1 HETATM 3 O O2 PO4 . . . M 3 -5.063 -3.994 64.518 1 68.41 ? O2 PO4 712 A 1 HETATM 4 O O3 PO4 . . . M 3 -3.063 -2.743 64.915 1 59.97 ? O3 PO4 712 A 1 HETATM 5 O O4 PO4 . . . M 3 -3.627 -4.55 66.544 1 63.47 ? O4 PO4 712 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #