data_4XYZ # _model_server_result.job_id K_uXq7pYiwirj1pbAO6jrw _model_server_result.datetime_utc '2024-10-28 02:35:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":104}' # _entry.id 4XYZ # _exptl.entry_id 4XYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.45 _cell.angle_gamma 90 _cell.entry_id 4XYZ _cell.length_a 29.48 _cell.length_b 57.017 _cell.length_c 33.984 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 239 n n O1 HO1 PG4 sing 240 n n C1 C2 PG4 sing 241 n n C1 H11 PG4 sing 242 n n C1 H12 PG4 sing 243 n n C2 O2 PG4 sing 244 n n C2 H21 PG4 sing 245 n n C2 H22 PG4 sing 246 n n O2 C3 PG4 sing 247 n n C3 C4 PG4 sing 248 n n C3 H31 PG4 sing 249 n n C3 H32 PG4 sing 250 n n C4 O3 PG4 sing 251 n n C4 H41 PG4 sing 252 n n C4 H42 PG4 sing 253 n n O3 C5 PG4 sing 254 n n C5 C6 PG4 sing 255 n n C5 H51 PG4 sing 256 n n C5 H52 PG4 sing 257 n n C6 O4 PG4 sing 258 n n C6 H61 PG4 sing 259 n n C6 H62 PG4 sing 260 n n O4 C7 PG4 sing 261 n n C7 C8 PG4 sing 262 n n C7 H71 PG4 sing 263 n n C7 H72 PG4 sing 264 n n C8 O5 PG4 sing 265 n n C8 H81 PG4 sing 266 n n C8 H82 PG4 sing 267 n n O5 HO5 PG4 sing 268 n n # _atom_sites.entry_id 4XYZ _atom_sites.fract_transf_matrix[1][1] 0.033921 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003235 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017539 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 101 1 EDO EDO . D 3 IOD A 1 102 1 IOD IOD . E 4 ACT A 1 103 1 ACT ACT . F 5 PG4 A 1 104 1 PG4 PG4 . G 6 HOH A 1 201 89 HOH HOH . G 6 HOH A 2 202 83 HOH HOH . G 6 HOH A 3 203 74 HOH HOH . G 6 HOH A 4 204 92 HOH HOH . G 6 HOH A 5 205 21 HOH HOH . G 6 HOH A 6 206 87 HOH HOH . G 6 HOH A 7 207 27 HOH HOH . G 6 HOH A 8 208 1 HOH HOH . G 6 HOH A 9 209 5 HOH HOH . G 6 HOH A 10 210 91 HOH HOH . G 6 HOH A 11 211 2 HOH HOH . G 6 HOH A 12 212 11 HOH HOH . G 6 HOH A 13 213 4 HOH HOH . G 6 HOH A 14 214 3 HOH HOH . G 6 HOH A 15 215 62 HOH HOH . G 6 HOH A 16 216 54 HOH HOH . G 6 HOH A 17 217 53 HOH HOH . G 6 HOH A 18 218 64 HOH HOH . G 6 HOH A 19 219 81 HOH HOH . G 6 HOH A 20 220 95 HOH HOH . G 6 HOH A 21 221 57 HOH HOH . G 6 HOH A 22 222 34 HOH HOH . G 6 HOH A 23 223 30 HOH HOH . G 6 HOH A 24 224 63 HOH HOH . G 6 HOH A 25 225 61 HOH HOH . G 6 HOH A 26 226 43 HOH HOH . G 6 HOH A 27 227 24 HOH HOH . G 6 HOH A 28 228 59 HOH HOH . G 6 HOH A 29 229 47 HOH HOH . G 6 HOH A 30 230 15 HOH HOH . G 6 HOH A 31 231 88 HOH HOH . G 6 HOH A 32 232 19 HOH HOH . G 6 HOH A 33 233 49 HOH HOH . G 6 HOH A 34 234 68 HOH HOH . G 6 HOH A 35 235 32 HOH HOH . G 6 HOH A 36 236 71 HOH HOH . G 6 HOH A 37 237 78 HOH HOH . G 6 HOH A 38 238 46 HOH HOH . G 6 HOH A 39 239 76 HOH HOH . G 6 HOH A 40 240 67 HOH HOH . G 6 HOH A 41 241 98 HOH HOH . G 6 HOH A 42 242 20 HOH HOH . G 6 HOH A 43 243 79 HOH HOH . G 6 HOH A 44 244 7 HOH HOH . G 6 HOH A 45 245 14 HOH HOH . G 6 HOH A 46 246 16 HOH HOH . G 6 HOH A 47 247 33 HOH HOH . G 6 HOH A 48 248 39 HOH HOH . G 6 HOH A 49 249 44 HOH HOH . G 6 HOH A 50 250 48 HOH HOH . G 6 HOH A 51 251 55 HOH HOH . G 6 HOH A 52 252 56 HOH HOH . G 6 HOH A 53 253 97 HOH HOH . H 6 HOH B 1 101 28 HOH HOH . H 6 HOH B 2 102 85 HOH HOH . H 6 HOH B 3 103 96 HOH HOH . H 6 HOH B 4 104 42 HOH HOH . H 6 HOH B 5 105 40 HOH HOH . H 6 HOH B 6 106 51 HOH HOH . H 6 HOH B 7 107 50 HOH HOH . H 6 HOH B 8 108 23 HOH HOH . H 6 HOH B 9 109 31 HOH HOH . H 6 HOH B 10 110 77 HOH HOH . H 6 HOH B 11 111 84 HOH HOH . H 6 HOH B 12 112 72 HOH HOH . H 6 HOH B 13 113 45 HOH HOH . H 6 HOH B 14 114 66 HOH HOH . H 6 HOH B 15 115 35 HOH HOH . H 6 HOH B 16 116 52 HOH HOH . H 6 HOH B 17 117 73 HOH HOH . H 6 HOH B 18 118 10 HOH HOH . H 6 HOH B 19 119 38 HOH HOH . H 6 HOH B 20 120 8 HOH HOH . H 6 HOH B 21 121 37 HOH HOH . H 6 HOH B 22 122 26 HOH HOH . H 6 HOH B 23 123 75 HOH HOH . H 6 HOH B 24 124 70 HOH HOH . H 6 HOH B 25 125 65 HOH HOH . H 6 HOH B 26 126 36 HOH HOH . H 6 HOH B 27 127 9 HOH HOH . H 6 HOH B 28 128 60 HOH HOH . H 6 HOH B 29 129 41 HOH HOH . H 6 HOH B 30 130 90 HOH HOH . H 6 HOH B 31 131 58 HOH HOH . H 6 HOH B 32 132 82 HOH HOH . H 6 HOH B 33 133 80 HOH HOH . H 6 HOH B 34 134 93 HOH HOH . H 6 HOH B 35 135 94 HOH HOH . H 6 HOH B 36 136 99 HOH HOH . H 6 HOH B 37 137 6 HOH HOH . H 6 HOH B 38 138 12 HOH HOH . H 6 HOH B 39 139 13 HOH HOH . H 6 HOH B 40 140 17 HOH HOH . H 6 HOH B 41 141 18 HOH HOH . H 6 HOH B 42 142 22 HOH HOH . H 6 HOH B 43 143 25 HOH HOH . H 6 HOH B 44 144 29 HOH HOH . H 6 HOH B 45 145 69 HOH HOH . H 6 HOH B 46 146 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 5 11.46 1.829 -9.87 1 34.34 ? O1 PG4 104 A 1 HETATM 2 C C1 PG4 . . . F 5 11.666 0.412 -9.974 1 30.14 ? C1 PG4 104 A 1 HETATM 3 C C2 PG4 . . . F 5 12.678 -0.075 -8.981 1 27.2 ? C2 PG4 104 A 1 HETATM 4 O O2 PG4 . . . F 5 13.512 -1.148 -9.478 1 33.5 ? O2 PG4 104 A 1 HETATM 5 C C3 PG4 . . . F 5 14.025 -2.121 -8.552 1 28.21 ? C3 PG4 104 A 1 HETATM 6 C C4 PG4 . . . F 5 15.513 -2.012 -8.299 1 29.16 ? C4 PG4 104 A 1 HETATM 7 O O3 PG4 . . . F 5 15.852 -2.094 -6.903 1 31.98 ? O3 PG4 104 A 1 HETATM 8 C C5 PG4 . . . F 5 16.22 -0.826 -6.331 1 29.07 ? C5 PG4 104 A 1 HETATM 9 C C6 PG4 . . . F 5 16.221 -0.746 -4.825 1 28.77 ? C6 PG4 104 A 1 HETATM 10 O O4 PG4 . . . F 5 16.511 0.618 -4.436 1 32.09 ? O4 PG4 104 A 1 HETATM 11 C C7 PG4 . . . F 5 15.446 1.365 -3.799 1 31.21 ? C7 PG4 104 A 1 HETATM 12 C C8 PG4 . . . F 5 15.237 2.752 -4.401 1 34.16 ? C8 PG4 104 A 1 HETATM 13 O O5 PG4 . . . F 5 13.866 3.2 -4.315 1 36.18 ? O5 PG4 104 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #