data_4XZ2
#
_model_server_result.job_id            27n8xAvAg5TE8r9oZofPHA 
_model_server_result.datetime_utc      '2024-11-22 00:38:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4xz2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":802}' 
#
_entry.id    4XZ2 
#
_exptl.entry_id    4XZ2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              340.116 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,6-di-O-phosphono-beta-D-fructofuranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.96 
_cell.angle_gamma         90 
_cell.entry_id            4XZ2 
_cell.length_a            76.652 
_cell.length_b            164.524 
_cell.length_c            133.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4XZ2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 L N N 
? 3 O N N 
#
_chem_comp.formula           'C6 H14 O12 P2' 
_chem_comp.formula_weight    340.116 
_chem_comp.id                FBP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,6-di-O-phosphono-beta-D-fructofuranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1P FBP doub 156 n n 
P1 O2P FBP sing 157 n n 
P1 O3P FBP sing 158 n n 
P1 O1 FBP sing 159 n n 
O2P HOP2 FBP sing 160 n n 
O3P HOP3 FBP sing 161 n n 
O1 C1 FBP sing 162 n n 
C1 C2 FBP sing 163 n n 
C1 H11 FBP sing 164 n n 
C1 H12 FBP sing 165 n n 
C2 O2 FBP sing 166 n n 
C2 C3 FBP sing 167 n n 
C2 O5 FBP sing 168 n n 
O2 HO2 FBP sing 169 n n 
C3 O3 FBP sing 170 n n 
C3 C4 FBP sing 171 n n 
C3 H3 FBP sing 172 n n 
O3 HO3 FBP sing 173 n n 
C4 O4 FBP sing 174 n n 
C4 C5 FBP sing 175 n n 
C4 H4 FBP sing 176 n n 
O4 HO4 FBP sing 177 n n 
C5 O5 FBP sing 178 n n 
C5 C6 FBP sing 179 n n 
C5 H5 FBP sing 180 n n 
C6 O6 FBP sing 181 n n 
C6 H61 FBP sing 182 n n 
C6 H62 FBP sing 183 n n 
O6 P2 FBP sing 184 n n 
P2 O4P FBP doub 185 n n 
P2 O5P FBP sing 186 n n 
P2 O6P FBP sing 187 n n 
O5P HOP5 FBP sing 188 n n 
O6P HOP6 FBP sing 189 n n 
#
_pdbx_chem_comp_identifier.comp_id            FBP 
_pdbx_chem_comp_identifier.identifier         b-D-Fruf1PO36PO3 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     4XZ2 
_atom_sites.fract_transf_matrix[1][1]    0.013046 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003001 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006078 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007704 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PO4 A 1 801 803 PO4 PO4 . 
F 3 FBP A 1 802 802 FBP FBP . 
G 4 ADP B 1 801 800 ADP ADP . 
H 3 FBP B 1 802 802 FBP FBP . 
I 5 F6P B 1 803 801 F6P F6P . 
J 2 PO4 B 1 804 803 PO4 PO4 . 
K 2 PO4 B 1 805 804 PO4 PO4 . 
L 3 FBP C 1 801 802 FBP FBP . 
M 2 PO4 C 1 802 803 PO4 PO4 . 
N 4 ADP D 1 801 800 ADP ADP . 
O 3 FBP D 1 802 802 FBP FBP . 
P 5 F6P D 1 803 801 F6P F6P . 
Q 2 PO4 D 1 804 803 PO4 PO4 . 
R 2 PO4 D 1 805 804 PO4 PO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 FBP . . . H 3 -42.662 180.248 132.865 1 72.94 ? P1 FBP 802 B 1 
HETATM 2 O O1P FBP . . . H 3 -43.381 180.522 131.559 1 78.14 ? O1P FBP 802 B 1 
HETATM 3 O O2P FBP . . . H 3 -42.975 181.389 133.776 1 71.45 ? O2P FBP 802 B 1 
HETATM 4 O O3P FBP . . . H 3 -43.157 178.942 133.474 1 70.5 ? O3P FBP 802 B 1 
HETATM 5 O O1 FBP . . . H 3 -41.078 180.228 132.665 1 75.72 ? O1 FBP 802 B 1 
HETATM 6 C C1 FBP . . . H 3 -40.477 179.076 132.137 1 87.83 ? C1 FBP 802 B 1 
HETATM 7 C C2 FBP . . . H 3 -39.082 178.925 132.718 1 94.51 ? C2 FBP 802 B 1 
HETATM 8 O O2 FBP . . . H 3 -38.293 178.2 131.734 1 100.17 ? O2 FBP 802 B 1 
HETATM 9 C C3 FBP . . . H 3 -39.05 178.218 134.072 1 93.74 ? C3 FBP 802 B 1 
HETATM 10 O O3 FBP . . . H 3 -38.387 177.001 133.954 1 99.9 ? O3 FBP 802 B 1 
HETATM 11 C C4 FBP . . . H 3 -38.264 179.132 134.984 1 89.64 ? C4 FBP 802 B 1 
HETATM 12 O O4 FBP . . . H 3 -39.004 179.387 136.128 1 89.57 ? O4 FBP 802 B 1 
HETATM 13 C C5 FBP . . . H 3 -38.057 180.413 134.211 1 91.92 ? C5 FBP 802 B 1 
HETATM 14 O O5 FBP . . . H 3 -38.543 180.22 132.9 1 95.75 ? O5 FBP 802 B 1 
HETATM 15 C C6 FBP . . . H 3 -36.585 180.78 134.137 1 93.51 ? C6 FBP 802 B 1 
HETATM 16 O O6 FBP . . . H 3 -36.415 181.67 133.052 1 94.83 ? O6 FBP 802 B 1 
HETATM 17 P P2 FBP . . . H 3 -35.551 183.012 133.192 1 94.6 ? P2 FBP 802 B 1 
HETATM 18 O O4P FBP . . . H 3 -35.845 184.057 132.074 1 75.82 ? O4P FBP 802 B 1 
HETATM 19 O O5P FBP . . . H 3 -34.113 182.553 133.15 1 91.07 ? O5P FBP 802 B 1 
HETATM 20 O O6P FBP . . . H 3 -35.836 183.451 134.618 1 80.18 ? O6P FBP 802 B 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#