data_4XZ2 # _model_server_result.job_id ajhMo_tAvJQ4EgUrPOyunw _model_server_result.datetime_utc '2024-11-21 23:46:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4xz2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":803}' # _entry.id 4XZ2 # _exptl.entry_id 4XZ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.96 _cell.angle_gamma 90 _cell.entry_id 4XZ2 _cell.length_a 76.652 _cell.length_b 164.524 _cell.length_c 133.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XZ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 P N N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id F6P _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms FRUCTOSE-6-PHOSPHATE;6-O-phosphono-beta-D-fructose;6-O-phosphono-D-fructose;6-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 F6P sing 127 n n O1 HO1 F6P sing 128 n n C1 C2 F6P sing 129 n n C1 H11 F6P sing 130 n n C1 H12 F6P sing 131 n n C2 O2 F6P sing 132 n n C2 C3 F6P sing 133 n n C2 O5 F6P sing 134 n n O2 HO2 F6P sing 135 n n C3 O3 F6P sing 136 n n C3 C4 F6P sing 137 n n C3 H3 F6P sing 138 n n O3 HO3 F6P sing 139 n n C4 O4 F6P sing 140 n n C4 C5 F6P sing 141 n n C4 H4 F6P sing 142 n n O4 HO4 F6P sing 143 n n C5 O5 F6P sing 144 n n C5 C6 F6P sing 145 n n C5 H5 F6P sing 146 n n C6 O6 F6P sing 147 n n C6 H61 F6P sing 148 n n C6 H62 F6P sing 149 n n O6 P F6P sing 150 n n P O1P F6P doub 151 n n P O2P F6P sing 152 n n P O3P F6P sing 153 n n O2P HOP2 F6P sing 154 n n O3P HOP3 F6P sing 155 n n # _pdbx_chem_comp_identifier.comp_id F6P _pdbx_chem_comp_identifier.identifier b-D-Fruf6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 4XZ2 _atom_sites.fract_transf_matrix[1][1] 0.013046 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003001 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007704 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 801 803 PO4 PO4 . F 3 FBP A 1 802 802 FBP FBP . G 4 ADP B 1 801 800 ADP ADP . H 3 FBP B 1 802 802 FBP FBP . I 5 F6P B 1 803 801 F6P F6P . J 2 PO4 B 1 804 803 PO4 PO4 . K 2 PO4 B 1 805 804 PO4 PO4 . L 3 FBP C 1 801 802 FBP FBP . M 2 PO4 C 1 802 803 PO4 PO4 . N 4 ADP D 1 801 800 ADP ADP . O 3 FBP D 1 802 802 FBP FBP . P 5 F6P D 1 803 801 F6P F6P . Q 2 PO4 D 1 804 803 PO4 PO4 . R 2 PO4 D 1 805 804 PO4 PO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 F6P . . . I 5 -44.181 150.893 106.15 1 47.91 ? O1 F6P 803 B 1 HETATM 2 C C1 F6P . . . I 5 -43.723 152.187 105.713 1 54.52 ? C1 F6P 803 B 1 HETATM 3 C C2 F6P . . . I 5 -42.276 152.328 105.182 1 58.98 ? C2 F6P 803 B 1 HETATM 4 O O2 F6P . . . I 5 -41.333 152.522 106.253 1 58.54 ? O2 F6P 803 B 1 HETATM 5 C C3 F6P . . . I 5 -42.142 153.492 104.192 1 61.07 ? C3 F6P 803 B 1 HETATM 6 O O3 F6P . . . I 5 -41.276 154.505 104.678 1 69.02 ? O3 F6P 803 B 1 HETATM 7 C C4 F6P . . . I 5 -41.499 152.947 102.945 1 58.25 ? C4 F6P 803 B 1 HETATM 8 O O4 F6P . . . I 5 -42.301 153.195 101.81 1 61.47 ? O4 F6P 803 B 1 HETATM 9 C C5 F6P . . . I 5 -41.402 151.461 103.154 1 56.12 ? C5 F6P 803 B 1 HETATM 10 O O5 F6P . . . I 5 -41.85 151.161 104.482 1 59.57 ? O5 F6P 803 B 1 HETATM 11 C C6 F6P . . . I 5 -39.978 150.969 102.91 1 51.58 ? C6 F6P 803 B 1 HETATM 12 O O6 F6P . . . I 5 -40.014 149.556 102.76 1 45.72 ? O6 F6P 803 B 1 HETATM 13 P P F6P . . . I 5 -38.752 148.681 103.188 1 45.95 ? P F6P 803 B 1 HETATM 14 O O1P F6P . . . I 5 -37.655 149.273 102.35 1 43.86 ? O1P F6P 803 B 1 HETATM 15 O O2P F6P . . . I 5 -39.026 147.188 102.936 1 45.42 ? O2P F6P 803 B 1 HETATM 16 O O3P F6P . . . I 5 -38.568 148.943 104.671 1 48.92 ? O3P F6P 803 B 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #