data_4Y0J # _model_server_result.job_id RSS2bzE8PKVyuTIQIiQVfQ _model_server_result.datetime_utc '2025-08-01 14:08:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y0j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4Y0J # _exptl.entry_id 4Y0J _exptl.method 'NEUTRON DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.67 _cell.angle_gamma 90 _cell.entry_id 4Y0J _cell.length_a 42.75 _cell.length_b 41.68 _cell.length_c 72.95 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y0J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 92 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc3 A ND1 HIS 117 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C O DOD . A DOD 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4Y0J _atom_sites.fract_transf_matrix[1][1] 0.023392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006124 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 262 ZN ZN . C 3 DOD A 1 401 26 DOD DOD . C 3 DOD A 2 402 36 DOD DOD . C 3 DOD A 3 403 25 DOD DOD . C 3 DOD A 4 404 138 DOD DOD . C 3 DOD A 5 405 74 DOD DOD . C 3 DOD A 6 406 5 DOD DOD . C 3 DOD A 7 407 124 DOD DOD . C 3 DOD A 8 408 111 DOD DOD . C 3 DOD A 9 409 84 DOD DOD . C 3 DOD A 10 410 106 DOD DOD . C 3 DOD A 11 411 94 DOD DOD . C 3 DOD A 12 412 3 DOD DOD . C 3 DOD A 13 413 16 DOD DOD . C 3 DOD A 14 414 72 DOD DOD . C 3 DOD A 15 415 49 DOD DOD . C 3 DOD A 16 416 7 DOD DOD . C 3 DOD A 17 417 47 DOD DOD . C 3 DOD A 18 418 68 DOD DOD . C 3 DOD A 19 419 18 DOD DOD . C 3 DOD A 20 420 119 DOD DOD . C 3 DOD A 21 421 71 DOD DOD . C 3 DOD A 22 422 80 DOD DOD . C 3 DOD A 23 423 20 DOD DOD . C 3 DOD A 24 424 2 DOD DOD . C 3 DOD A 25 425 56 DOD DOD . C 3 DOD A 26 426 6 DOD DOD . C 3 DOD A 27 427 82 DOD DOD . C 3 DOD A 28 428 112 DOD DOD . C 3 DOD A 29 429 33 DOD DOD . C 3 DOD A 30 430 4 DOD DOD . C 3 DOD A 31 431 9 DOD DOD . C 3 DOD A 32 432 60 DOD DOD . C 3 DOD A 33 433 58 DOD DOD . C 3 DOD A 34 434 902 DOD DOD . C 3 DOD A 35 435 50 DOD DOD . C 3 DOD A 36 436 45 DOD DOD . C 3 DOD A 37 437 78 DOD DOD . C 3 DOD A 38 438 134 DOD DOD . C 3 DOD A 39 439 128 DOD DOD . C 3 DOD A 40 440 22 DOD DOD . C 3 DOD A 41 441 83 DOD DOD . C 3 DOD A 42 442 54 DOD DOD . C 3 DOD A 43 443 53 DOD DOD . C 3 DOD A 44 444 55 DOD DOD . C 3 DOD A 45 445 90 DOD DOD . C 3 DOD A 46 446 99 DOD DOD . C 3 DOD A 47 447 13 DOD DOD . C 3 DOD A 48 448 85 DOD DOD . C 3 DOD A 49 449 12 DOD DOD . C 3 DOD A 50 450 42 DOD DOD . C 3 DOD A 51 451 904 DOD DOD . C 3 DOD A 52 452 40 DOD DOD . C 3 DOD A 53 453 69 DOD DOD . C 3 DOD A 54 454 905 DOD DOD . C 3 DOD A 55 455 15 DOD DOD . C 3 DOD A 56 456 104 DOD DOD . C 3 DOD A 57 457 19 DOD DOD . C 3 DOD A 58 458 43 DOD DOD . C 3 DOD A 59 459 14 DOD DOD . C 3 DOD A 60 460 98 DOD DOD . C 3 DOD A 61 461 8 DOD DOD . C 3 DOD A 62 462 73 DOD DOD . C 3 DOD A 63 463 105 DOD DOD . C 3 DOD A 64 464 21 DOD DOD . C 3 DOD A 65 465 35 DOD DOD . C 3 DOD A 66 466 130 DOD DOD . C 3 DOD A 67 467 17 DOD DOD . C 3 DOD A 68 468 88 DOD DOD . C 3 DOD A 69 469 10 DOD DOD . C 3 DOD A 70 470 29 DOD DOD . C 3 DOD A 71 471 79 DOD DOD . C 3 DOD A 72 472 38 DOD DOD . C 3 DOD A 73 473 37 DOD DOD . C 3 DOD A 74 474 95 DOD DOD . C 3 DOD A 75 475 113 DOD DOD . C 3 DOD A 76 476 39 DOD DOD . C 3 DOD A 77 477 116 DOD DOD . C 3 DOD A 78 478 75 DOD DOD . C 3 DOD A 79 479 137 DOD DOD . C 3 DOD A 80 480 30 DOD DOD . C 3 DOD A 81 481 11 DOD DOD . C 3 DOD A 82 482 46 DOD DOD . C 3 DOD A 83 483 65 DOD DOD . C 3 DOD A 84 484 89 DOD DOD . C 3 DOD A 85 485 23 DOD DOD . C 3 DOD A 86 486 66 DOD DOD . C 3 DOD A 87 487 81 DOD DOD . C 3 DOD A 88 488 41 DOD DOD . C 3 DOD A 89 489 114 DOD DOD . C 3 DOD A 90 490 118 DOD DOD . C 3 DOD A 91 491 63 DOD DOD . C 3 DOD A 92 492 64 DOD DOD . C 3 DOD A 93 493 61 DOD DOD . C 3 DOD A 94 494 900 DOD DOD . C 3 DOD A 95 495 101 DOD DOD . C 3 DOD A 96 496 93 DOD DOD . C 3 DOD A 97 497 110 DOD DOD . C 3 DOD A 98 498 48 DOD DOD . C 3 DOD A 99 499 24 DOD DOD . C 3 DOD A 100 500 121 DOD DOD . C 3 DOD A 101 501 907 DOD DOD . C 3 DOD A 102 502 67 DOD DOD . C 3 DOD A 103 503 109 DOD DOD . C 3 DOD A 104 504 96 DOD DOD . C 3 DOD A 105 505 136 DOD DOD . C 3 DOD A 106 506 131 DOD DOD . C 3 DOD A 107 507 127 DOD DOD . C 3 DOD A 108 508 44 DOD DOD . C 3 DOD A 109 509 126 DOD DOD . C 3 DOD A 110 510 103 DOD DOD . C 3 DOD A 111 511 70 DOD DOD . C 3 DOD A 112 512 108 DOD DOD . C 3 DOD A 113 513 92 DOD DOD . C 3 DOD A 114 514 77 DOD DOD . C 3 DOD A 115 515 59 DOD DOD . C 3 DOD A 116 516 57 DOD DOD . C 3 DOD A 117 517 97 DOD DOD . C 3 DOD A 118 518 102 DOD DOD . C 3 DOD A 119 519 117 DOD DOD . C 3 DOD A 120 520 107 DOD DOD . C 3 DOD A 121 521 62 DOD DOD . C 3 DOD A 122 522 51 DOD DOD . C 3 DOD A 123 523 115 DOD DOD . C 3 DOD A 124 524 100 DOD DOD . C 3 DOD A 125 525 87 DOD DOD . C 3 DOD A 126 526 31 DOD DOD . C 3 DOD A 127 527 76 DOD DOD . C 3 DOD A 128 528 28 DOD DOD . C 3 DOD A 129 529 34 DOD DOD . C 3 DOD A 130 530 132 DOD DOD . C 3 DOD A 131 531 52 DOD DOD . C 3 DOD A 132 532 901 DOD DOD . C 3 DOD A 133 533 135 DOD DOD . C 3 DOD A 134 534 120 DOD DOD . C 3 DOD A 135 535 91 DOD DOD . C 3 DOD A 136 536 123 DOD DOD . C 3 DOD A 137 537 129 DOD DOD . C 3 DOD A 138 538 133 DOD DOD . C 3 DOD A 139 539 125 DOD DOD . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -6.72 _atom_site.Cartn_y -1.798 _atom_site.Cartn_z 15.473 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #