data_4Y0P # _model_server_result.job_id 1Ru6-eTByDYe9SmwICeTPQ _model_server_result.datetime_utc '2024-11-25 10:51:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y0p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4Y0P # _exptl.entry_id 4Y0P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 264.363 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Tetracaine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4Y0P _cell.length_a 53.347 _cell.length_b 53.347 _cell.length_c 111.29 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y0P _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 74.193333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'C15 H24 N2 O2' _chem_comp.formula_weight 264.363 _chem_comp.id TE4 _chem_comp.mon_nstd_flag . _chem_comp.name Tetracaine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(dimethylamino)ethyl 4-(butylamino)benzoate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 N1 TE4 sing 290 n n C14 N1 TE4 sing 291 n n N1 C9 TE4 sing 292 n n C9 C8 TE4 sing 293 n n C8 O1 TE4 sing 294 n n C13 C12 TE4 sing 295 n n O1 C7 TE4 sing 296 n n C11 C12 TE4 sing 297 n n C11 C10 TE4 sing 298 n n C5 C6 TE4 doub 299 n y C5 C4 TE4 sing 300 n y C7 C4 TE4 sing 301 n n C7 O2 TE4 doub 302 n n C6 C1 TE4 sing 303 n y C4 C3 TE4 doub 304 n y C1 N2 TE4 sing 305 n n C1 C2 TE4 doub 306 n y C10 N2 TE4 sing 307 n n C3 C2 TE4 sing 308 n y C8 H1 TE4 sing 309 n n C8 H2 TE4 sing 310 n n C9 H3 TE4 sing 311 n n C9 H4 TE4 sing 312 n n C14 H6 TE4 sing 313 n n C14 H7 TE4 sing 314 n n C14 H8 TE4 sing 315 n n C15 H9 TE4 sing 316 n n C15 H10 TE4 sing 317 n n C15 H11 TE4 sing 318 n n C5 H12 TE4 sing 319 n n C6 H13 TE4 sing 320 n n C2 H14 TE4 sing 321 n n C3 H15 TE4 sing 322 n n N2 H16 TE4 sing 323 n n C10 H17 TE4 sing 324 n n C10 H18 TE4 sing 325 n n C11 H19 TE4 sing 326 n n C11 H20 TE4 sing 327 n n C12 H21 TE4 sing 328 n n C12 H22 TE4 sing 329 n n C13 H23 TE4 sing 330 n n C13 H24 TE4 sing 331 n n C13 H25 TE4 sing 332 n n # _atom_sites.entry_id 4Y0P _atom_sites.fract_transf_matrix[1][1] 0.018745 _atom_sites.fract_transf_matrix[1][2] 0.010823 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TE4 A 1 201 1 TE4 TE4 . C 3 HOH A 1 301 35 HOH HOH . C 3 HOH A 2 302 88 HOH HOH . C 3 HOH A 3 303 17 HOH HOH . C 3 HOH A 4 304 7 HOH HOH . C 3 HOH A 5 305 64 HOH HOH . C 3 HOH A 6 306 53 HOH HOH . C 3 HOH A 7 307 62 HOH HOH . C 3 HOH A 8 308 5 HOH HOH . C 3 HOH A 9 309 18 HOH HOH . C 3 HOH A 10 310 4 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 30 HOH HOH . C 3 HOH A 13 313 79 HOH HOH . C 3 HOH A 14 314 60 HOH HOH . C 3 HOH A 15 315 38 HOH HOH . C 3 HOH A 16 316 2 HOH HOH . C 3 HOH A 17 317 24 HOH HOH . C 3 HOH A 18 318 15 HOH HOH . C 3 HOH A 19 319 16 HOH HOH . C 3 HOH A 20 320 8 HOH HOH . C 3 HOH A 21 321 10 HOH HOH . C 3 HOH A 22 322 4 HOH HOH . C 3 HOH A 23 323 9 HOH HOH . C 3 HOH A 24 324 3 HOH HOH . C 3 HOH A 25 325 1 HOH HOH . C 3 HOH A 26 326 50 HOH HOH . C 3 HOH A 27 327 14 HOH HOH . C 3 HOH A 28 328 85 HOH HOH . C 3 HOH A 29 329 1 HOH HOH . C 3 HOH A 30 330 2 HOH HOH . C 3 HOH A 31 331 6 HOH HOH . C 3 HOH A 32 332 13 HOH HOH . C 3 HOH A 33 333 17 HOH HOH . C 3 HOH A 34 334 19 HOH HOH . C 3 HOH A 35 335 22 HOH HOH . C 3 HOH A 36 336 23 HOH HOH . C 3 HOH A 37 337 28 HOH HOH . C 3 HOH A 38 338 31 HOH HOH . C 3 HOH A 39 339 32 HOH HOH . C 3 HOH A 40 340 36 HOH HOH . C 3 HOH A 41 341 39 HOH HOH . C 3 HOH A 42 342 40 HOH HOH . C 3 HOH A 43 343 41 HOH HOH . C 3 HOH A 44 344 43 HOH HOH . C 3 HOH A 45 345 44 HOH HOH . C 3 HOH A 46 346 48 HOH HOH . C 3 HOH A 47 347 51 HOH HOH . C 3 HOH A 48 348 52 HOH HOH . C 3 HOH A 49 349 58 HOH HOH . C 3 HOH A 50 350 59 HOH HOH . C 3 HOH A 51 351 65 HOH HOH . C 3 HOH A 52 352 68 HOH HOH . C 3 HOH A 53 353 78 HOH HOH . C 3 HOH A 54 354 84 HOH HOH . C 3 HOH A 55 355 86 HOH HOH . C 3 HOH A 56 356 89 HOH HOH . C 3 HOH A 57 357 1 HOH HOH . C 3 HOH A 58 358 3 HOH HOH . C 3 HOH A 59 359 11 HOH HOH . C 3 HOH A 60 360 12 HOH HOH . C 3 HOH A 61 361 13 HOH HOH . C 3 HOH A 62 362 15 HOH HOH . C 3 HOH A 63 363 16 HOH HOH . C 3 HOH A 64 364 19 HOH HOH . C 3 HOH A 65 365 20 HOH HOH . C 3 HOH A 66 366 21 HOH HOH . C 3 HOH A 67 367 22 HOH HOH . C 3 HOH A 68 368 24 HOH HOH . C 3 HOH A 69 369 25 HOH HOH . C 3 HOH A 70 370 26 HOH HOH . C 3 HOH A 71 371 27 HOH HOH . C 3 HOH A 72 372 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 TE4 . . . B 2 -4.404 7.655 18.691 1 45.81 ? O2 TE4 201 A 1 HETATM 2 C C7 TE4 . . . B 2 -3.53 8.283 19.252 1 41.61 ? C7 TE4 201 A 1 HETATM 3 O O1 TE4 . . . B 2 -2.687 7.738 20.112 1 49.56 ? O1 TE4 201 A 1 HETATM 4 C C8 TE4 . . . B 2 -3.087 6.557 20.813 1 54.56 ? C8 TE4 201 A 1 HETATM 5 C C9 TE4 . . . B 2 -2.782 5.327 19.957 1 56.57 ? C9 TE4 201 A 1 HETATM 6 N N1 TE4 . . . B 2 -1.431 4.852 20.228 1 62.65 ? N1 TE4 201 A 1 HETATM 7 C C14 TE4 . . . B 2 -0.977 3.986 19.144 1 62.06 ? C14 TE4 201 A 1 HETATM 8 C C15 TE4 . . . B 2 -1.419 4.114 21.487 1 61.28 ? C15 TE4 201 A 1 HETATM 9 C C4 TE4 . . . B 2 -3.306 9.745 19.009 1 37.34 ? C4 TE4 201 A 1 HETATM 10 C C5 TE4 . . . B 2 -4.112 10.428 18.097 1 36.17 ? C5 TE4 201 A 1 HETATM 11 C C6 TE4 . . . B 2 -3.908 11.788 17.853 1 31.67 ? C6 TE4 201 A 1 HETATM 12 C C1 TE4 . . . B 2 -2.902 12.474 18.54 1 29.61 ? C1 TE4 201 A 1 HETATM 13 C C2 TE4 . . . B 2 -2.099 11.795 19.447 1 31.83 ? C2 TE4 201 A 1 HETATM 14 C C3 TE4 . . . B 2 -2.292 10.433 19.683 1 34.87 ? C3 TE4 201 A 1 HETATM 15 N N2 TE4 . . . B 2 -2.678 13.783 18.323 1 27.89 ? N2 TE4 201 A 1 HETATM 16 C C10 TE4 . . . B 2 -3.741 14.576 17.75 1 27.9 ? C10 TE4 201 A 1 HETATM 17 C C11 TE4 . . . B 2 -3.412 16.041 17.639 1 26.12 ? C11 TE4 201 A 1 HETATM 18 C C12 TE4 . . . B 2 -4.09 16.559 16.378 1 25.96 ? C12 TE4 201 A 1 HETATM 19 C C13 TE4 . . . B 2 -4.344 18.055 16.39 1 23.2 ? C13 TE4 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 429 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #