data_4Y0S # _model_server_result.job_id bJHtuPpBbQqsvknQaK9skg _model_server_result.datetime_utc '2024-11-15 09:37:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 4Y0S # _exptl.entry_id 4Y0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4Y0S _cell.length_a 53.113 _cell.length_b 53.113 _cell.length_c 111.148 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 339 n n S O2 SO4 doub 340 n n S O3 SO4 sing 341 n n S O4 SO4 sing 342 n n # _atom_sites.entry_id 4Y0S _atom_sites.fract_transf_matrix[1][1] 0.018828 _atom_sites.fract_transf_matrix[1][2] 0.01087 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021741 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008997 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PX9 A 1 201 1 PX9 PX9 . C 3 SO4 A 1 202 1 SO4 SO4 . D 3 SO4 A 1 203 2 SO4 SO4 . E 4 HOH A 1 301 50 HOH HOH . E 4 HOH A 2 302 13 HOH HOH . E 4 HOH A 3 303 99 HOH HOH . E 4 HOH A 4 304 66 HOH HOH . E 4 HOH A 5 305 6 HOH HOH . E 4 HOH A 6 306 11 HOH HOH . E 4 HOH A 7 307 65 HOH HOH . E 4 HOH A 8 308 34 HOH HOH . E 4 HOH A 9 309 73 HOH HOH . E 4 HOH A 10 310 51 HOH HOH . E 4 HOH A 11 311 14 HOH HOH . E 4 HOH A 12 312 92 HOH HOH . E 4 HOH A 13 313 28 HOH HOH . E 4 HOH A 14 314 44 HOH HOH . E 4 HOH A 15 315 2 HOH HOH . E 4 HOH A 16 316 69 HOH HOH . E 4 HOH A 17 317 91 HOH HOH . E 4 HOH A 18 318 59 HOH HOH . E 4 HOH A 19 319 17 HOH HOH . E 4 HOH A 20 320 42 HOH HOH . E 4 HOH A 21 321 106 HOH HOH . E 4 HOH A 22 322 3 HOH HOH . E 4 HOH A 23 323 30 HOH HOH . E 4 HOH A 24 324 56 HOH HOH . E 4 HOH A 25 325 27 HOH HOH . E 4 HOH A 26 326 88 HOH HOH . E 4 HOH A 27 327 10 HOH HOH . E 4 HOH A 28 328 67 HOH HOH . E 4 HOH A 29 329 35 HOH HOH . E 4 HOH A 30 330 45 HOH HOH . E 4 HOH A 31 331 60 HOH HOH . E 4 HOH A 32 332 103 HOH HOH . E 4 HOH A 33 333 68 HOH HOH . E 4 HOH A 34 334 81 HOH HOH . E 4 HOH A 35 335 64 HOH HOH . E 4 HOH A 36 336 21 HOH HOH . E 4 HOH A 37 337 54 HOH HOH . E 4 HOH A 38 338 78 HOH HOH . E 4 HOH A 39 339 70 HOH HOH . E 4 HOH A 40 340 93 HOH HOH . E 4 HOH A 41 341 58 HOH HOH . E 4 HOH A 42 342 38 HOH HOH . E 4 HOH A 43 343 48 HOH HOH . E 4 HOH A 44 344 96 HOH HOH . E 4 HOH A 45 345 97 HOH HOH . E 4 HOH A 46 346 94 HOH HOH . E 4 HOH A 47 347 7 HOH HOH . E 4 HOH A 48 348 8 HOH HOH . E 4 HOH A 49 349 9 HOH HOH . E 4 HOH A 50 350 12 HOH HOH . E 4 HOH A 51 351 15 HOH HOH . E 4 HOH A 52 352 16 HOH HOH . E 4 HOH A 53 353 18 HOH HOH . E 4 HOH A 54 354 19 HOH HOH . E 4 HOH A 55 355 20 HOH HOH . E 4 HOH A 56 356 23 HOH HOH . E 4 HOH A 57 357 24 HOH HOH . E 4 HOH A 58 358 25 HOH HOH . E 4 HOH A 59 359 26 HOH HOH . E 4 HOH A 60 360 29 HOH HOH . E 4 HOH A 61 361 31 HOH HOH . E 4 HOH A 62 362 33 HOH HOH . E 4 HOH A 63 363 36 HOH HOH . E 4 HOH A 64 364 37 HOH HOH . E 4 HOH A 65 365 39 HOH HOH . E 4 HOH A 66 366 40 HOH HOH . E 4 HOH A 67 367 41 HOH HOH . E 4 HOH A 68 368 43 HOH HOH . E 4 HOH A 69 369 46 HOH HOH . E 4 HOH A 70 370 47 HOH HOH . E 4 HOH A 71 371 49 HOH HOH . E 4 HOH A 72 372 52 HOH HOH . E 4 HOH A 73 373 53 HOH HOH . E 4 HOH A 74 374 55 HOH HOH . E 4 HOH A 75 375 61 HOH HOH . E 4 HOH A 76 376 62 HOH HOH . E 4 HOH A 77 377 63 HOH HOH . E 4 HOH A 78 378 74 HOH HOH . E 4 HOH A 79 379 75 HOH HOH . E 4 HOH A 80 380 76 HOH HOH . E 4 HOH A 81 381 77 HOH HOH . E 4 HOH A 82 382 79 HOH HOH . E 4 HOH A 83 383 80 HOH HOH . E 4 HOH A 84 384 82 HOH HOH . E 4 HOH A 85 385 83 HOH HOH . E 4 HOH A 86 386 84 HOH HOH . E 4 HOH A 87 387 85 HOH HOH . E 4 HOH A 88 388 86 HOH HOH . E 4 HOH A 89 389 87 HOH HOH . E 4 HOH A 90 390 89 HOH HOH . E 4 HOH A 91 391 90 HOH HOH . E 4 HOH A 92 392 95 HOH HOH . E 4 HOH A 93 393 98 HOH HOH . E 4 HOH A 94 394 100 HOH HOH . E 4 HOH A 95 395 101 HOH HOH . E 4 HOH A 96 396 102 HOH HOH . E 4 HOH A 97 397 104 HOH HOH . E 4 HOH A 98 398 105 HOH HOH . E 4 HOH A 99 399 107 HOH HOH . E 4 HOH A 100 400 108 HOH HOH . E 4 HOH A 101 401 109 HOH HOH . E 4 HOH A 102 402 110 HOH HOH . E 4 HOH A 103 403 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 12.011 6.536 -35.648 1 43.16 ? S SO4 203 A 1 HETATM 2 O O1 SO4 . . . D 3 13.365 7.143 -35.704 1 41.58 ? O1 SO4 203 A 1 HETATM 3 O O2 SO4 . . . D 3 11.269 6.882 -36.879 1 42.69 ? O2 SO4 203 A 1 HETATM 4 O O3 SO4 . . . D 3 12.158 5.073 -35.509 1 45.08 ? O3 SO4 203 A 1 HETATM 5 O O4 SO4 . . . D 3 11.25 7.076 -34.49 1 41.05 ? O4 SO4 203 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #