data_4Y0V # _model_server_result.job_id U8WPk2sO7AqtDenN6Fx1DA _model_server_result.datetime_utc '2025-08-01 00:42:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4Y0V # _exptl.entry_id 4Y0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.45 _cell.angle_gamma 90 _cell.entry_id 4Y0V _cell.length_a 123.54 _cell.length_b 40.66 _cell.length_c 78.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 31 A THR 27 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc2 C O1B GDP . A GDP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc3 D MG MG . A MG 202 1_555 G O HOH . A HOH 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc4 D MG MG . A MG 202 1_555 G O HOH . A HOH 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc5 D MG MG . A MG 202 1_555 G O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc6 D MG MG . A MG 202 1_555 G O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc7 B OG1 THR 31 B THR 27 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc8 E O1B GDP . B GDP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc9 F MG MG . B MG 202 1_555 H O HOH . B HOH 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc10 F MG MG . B MG 202 1_555 H O HOH . B HOH 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc11 F MG MG . B MG 202 1_555 H O HOH . B HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc12 F MG MG . B MG 202 1_555 H O HOH . B HOH 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 4Y0V _atom_sites.fract_transf_matrix[1][1] 0.008095 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001058 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP A 1 201 3 GDP GDP . D 3 MG A 1 202 2 MG MG . E 2 GDP B 1 201 2 GDP GDP . F 3 MG B 1 202 1 MG MG . G 4 HOH A 1 301 238 HOH HOH . G 4 HOH A 2 302 243 HOH HOH . G 4 HOH A 3 303 193 HOH HOH . G 4 HOH A 4 304 184 HOH HOH . G 4 HOH A 5 305 214 HOH HOH . G 4 HOH A 6 306 21 HOH HOH . G 4 HOH A 7 307 85 HOH HOH . G 4 HOH A 8 308 33 HOH HOH . G 4 HOH A 9 309 208 HOH HOH . G 4 HOH A 10 310 302 HOH HOH . G 4 HOH A 11 311 202 HOH HOH . G 4 HOH A 12 312 50 HOH HOH . G 4 HOH A 13 313 201 HOH HOH . G 4 HOH A 14 314 73 HOH HOH . G 4 HOH A 15 315 114 HOH HOH . G 4 HOH A 16 316 172 HOH HOH . G 4 HOH A 17 317 113 HOH HOH . G 4 HOH A 18 318 134 HOH HOH . G 4 HOH A 19 319 267 HOH HOH . G 4 HOH A 20 320 183 HOH HOH . G 4 HOH A 21 321 181 HOH HOH . G 4 HOH A 22 322 144 HOH HOH . G 4 HOH A 23 323 136 HOH HOH . G 4 HOH A 24 324 212 HOH HOH . G 4 HOH A 25 325 241 HOH HOH . G 4 HOH A 26 326 256 HOH HOH . G 4 HOH A 27 327 260 HOH HOH . G 4 HOH A 28 328 7 HOH HOH . G 4 HOH A 29 329 63 HOH HOH . G 4 HOH A 30 330 141 HOH HOH . G 4 HOH A 31 331 318 HOH HOH . G 4 HOH A 32 332 312 HOH HOH . G 4 HOH A 33 333 182 HOH HOH . G 4 HOH A 34 334 294 HOH HOH . G 4 HOH A 35 335 15 HOH HOH . G 4 HOH A 36 336 164 HOH HOH . G 4 HOH A 37 337 156 HOH HOH . G 4 HOH A 38 338 338 HOH HOH . G 4 HOH A 39 339 230 HOH HOH . G 4 HOH A 40 340 44 HOH HOH . G 4 HOH A 41 341 227 HOH HOH . G 4 HOH A 42 342 4 HOH HOH . G 4 HOH A 43 343 5 HOH HOH . G 4 HOH A 44 344 8 HOH HOH . G 4 HOH A 45 345 11 HOH HOH . G 4 HOH A 46 346 12 HOH HOH . G 4 HOH A 47 347 14 HOH HOH . G 4 HOH A 48 348 16 HOH HOH . G 4 HOH A 49 349 17 HOH HOH . G 4 HOH A 50 350 18 HOH HOH . G 4 HOH A 51 351 19 HOH HOH . G 4 HOH A 52 352 24 HOH HOH . G 4 HOH A 53 353 27 HOH HOH . G 4 HOH A 54 354 28 HOH HOH . G 4 HOH A 55 355 30 HOH HOH . G 4 HOH A 56 356 31 HOH HOH . G 4 HOH A 57 357 34 HOH HOH . G 4 HOH A 58 358 35 HOH HOH . G 4 HOH A 59 359 36 HOH HOH . G 4 HOH A 60 360 38 HOH HOH . G 4 HOH A 61 361 40 HOH HOH . G 4 HOH A 62 362 46 HOH HOH . G 4 HOH A 63 363 48 HOH HOH . G 4 HOH A 64 364 52 HOH HOH . G 4 HOH A 65 365 58 HOH HOH . G 4 HOH A 66 366 60 HOH HOH . G 4 HOH A 67 367 62 HOH HOH . G 4 HOH A 68 368 70 HOH HOH . G 4 HOH A 69 369 74 HOH HOH . G 4 HOH A 70 370 75 HOH HOH . G 4 HOH A 71 371 78 HOH HOH . G 4 HOH A 72 372 79 HOH HOH . G 4 HOH A 73 373 81 HOH HOH . G 4 HOH A 74 374 84 HOH HOH . G 4 HOH A 75 375 87 HOH HOH . G 4 HOH A 76 376 89 HOH HOH . G 4 HOH A 77 377 90 HOH HOH . G 4 HOH A 78 378 91 HOH HOH . G 4 HOH A 79 379 92 HOH HOH . G 4 HOH A 80 380 93 HOH HOH . G 4 HOH A 81 381 94 HOH HOH . G 4 HOH A 82 382 95 HOH HOH . G 4 HOH A 83 383 96 HOH HOH . G 4 HOH A 84 384 97 HOH HOH . G 4 HOH A 85 385 101 HOH HOH . G 4 HOH A 86 386 104 HOH HOH . G 4 HOH A 87 387 105 HOH HOH . G 4 HOH A 88 388 111 HOH HOH . G 4 HOH A 89 389 119 HOH HOH . G 4 HOH A 90 390 121 HOH HOH . G 4 HOH A 91 391 123 HOH HOH . G 4 HOH A 92 392 126 HOH HOH . G 4 HOH A 93 393 127 HOH HOH . G 4 HOH A 94 394 129 HOH HOH . G 4 HOH A 95 395 132 HOH HOH . G 4 HOH A 96 396 133 HOH HOH . G 4 HOH A 97 397 135 HOH HOH . G 4 HOH A 98 398 143 HOH HOH . G 4 HOH A 99 399 146 HOH HOH . G 4 HOH A 100 400 148 HOH HOH . G 4 HOH A 101 401 152 HOH HOH . G 4 HOH A 102 402 153 HOH HOH . G 4 HOH A 103 403 154 HOH HOH . G 4 HOH A 104 404 157 HOH HOH . G 4 HOH A 105 405 158 HOH HOH . G 4 HOH A 106 406 162 HOH HOH . G 4 HOH A 107 407 166 HOH HOH . G 4 HOH A 108 408 167 HOH HOH . G 4 HOH A 109 409 169 HOH HOH . G 4 HOH A 110 410 170 HOH HOH . G 4 HOH A 111 411 171 HOH HOH . G 4 HOH A 112 412 173 HOH HOH . G 4 HOH A 113 413 174 HOH HOH . G 4 HOH A 114 414 175 HOH HOH . G 4 HOH A 115 415 185 HOH HOH . G 4 HOH A 116 416 187 HOH HOH . G 4 HOH A 117 417 190 HOH HOH . G 4 HOH A 118 418 191 HOH HOH . G 4 HOH A 119 419 195 HOH HOH . G 4 HOH A 120 420 197 HOH HOH . G 4 HOH A 121 421 203 HOH HOH . G 4 HOH A 122 422 205 HOH HOH . G 4 HOH A 123 423 206 HOH HOH . G 4 HOH A 124 424 207 HOH HOH . G 4 HOH A 125 425 209 HOH HOH . G 4 HOH A 126 426 210 HOH HOH . G 4 HOH A 127 427 211 HOH HOH . G 4 HOH A 128 428 213 HOH HOH . G 4 HOH A 129 429 231 HOH HOH . G 4 HOH A 130 430 232 HOH HOH . G 4 HOH A 131 431 240 HOH HOH . G 4 HOH A 132 432 242 HOH HOH . G 4 HOH A 133 433 244 HOH HOH . G 4 HOH A 134 434 245 HOH HOH . G 4 HOH A 135 435 254 HOH HOH . G 4 HOH A 136 436 263 HOH HOH . G 4 HOH A 137 437 264 HOH HOH . G 4 HOH A 138 438 269 HOH HOH . G 4 HOH A 139 439 272 HOH HOH . G 4 HOH A 140 440 273 HOH HOH . G 4 HOH A 141 441 277 HOH HOH . G 4 HOH A 142 442 280 HOH HOH . G 4 HOH A 143 443 281 HOH HOH . G 4 HOH A 144 444 283 HOH HOH . G 4 HOH A 145 445 284 HOH HOH . G 4 HOH A 146 446 289 HOH HOH . G 4 HOH A 147 447 291 HOH HOH . G 4 HOH A 148 448 292 HOH HOH . G 4 HOH A 149 449 293 HOH HOH . G 4 HOH A 150 450 296 HOH HOH . G 4 HOH A 151 451 301 HOH HOH . G 4 HOH A 152 452 306 HOH HOH . G 4 HOH A 153 453 308 HOH HOH . G 4 HOH A 154 454 315 HOH HOH . G 4 HOH A 155 455 316 HOH HOH . G 4 HOH A 156 456 317 HOH HOH . G 4 HOH A 157 457 328 HOH HOH . G 4 HOH A 158 458 335 HOH HOH . H 4 HOH B 1 301 198 HOH HOH . H 4 HOH B 2 302 226 HOH HOH . H 4 HOH B 3 303 168 HOH HOH . H 4 HOH B 4 304 120 HOH HOH . H 4 HOH B 5 305 69 HOH HOH . H 4 HOH B 6 306 233 HOH HOH . H 4 HOH B 7 307 56 HOH HOH . H 4 HOH B 8 308 224 HOH HOH . H 4 HOH B 9 309 23 HOH HOH . H 4 HOH B 10 310 130 HOH HOH . H 4 HOH B 11 311 189 HOH HOH . H 4 HOH B 12 312 139 HOH HOH . H 4 HOH B 13 313 222 HOH HOH . H 4 HOH B 14 314 137 HOH HOH . H 4 HOH B 15 315 29 HOH HOH . H 4 HOH B 16 316 221 HOH HOH . H 4 HOH B 17 317 86 HOH HOH . H 4 HOH B 18 318 3 HOH HOH . H 4 HOH B 19 319 298 HOH HOH . H 4 HOH B 20 320 304 HOH HOH . H 4 HOH B 21 321 271 HOH HOH . H 4 HOH B 22 322 9 HOH HOH . H 4 HOH B 23 323 42 HOH HOH . H 4 HOH B 24 324 47 HOH HOH . H 4 HOH B 25 325 324 HOH HOH . H 4 HOH B 26 326 55 HOH HOH . H 4 HOH B 27 327 200 HOH HOH . H 4 HOH B 28 328 303 HOH HOH . H 4 HOH B 29 329 1 HOH HOH . H 4 HOH B 30 330 250 HOH HOH . H 4 HOH B 31 331 61 HOH HOH . H 4 HOH B 32 332 83 HOH HOH . H 4 HOH B 33 333 161 HOH HOH . H 4 HOH B 34 334 251 HOH HOH . H 4 HOH B 35 335 192 HOH HOH . H 4 HOH B 36 336 82 HOH HOH . H 4 HOH B 37 337 334 HOH HOH . H 4 HOH B 38 338 186 HOH HOH . H 4 HOH B 39 339 68 HOH HOH . H 4 HOH B 40 340 179 HOH HOH . H 4 HOH B 41 341 228 HOH HOH . H 4 HOH B 42 342 336 HOH HOH . H 4 HOH B 43 343 2 HOH HOH . H 4 HOH B 44 344 6 HOH HOH . H 4 HOH B 45 345 10 HOH HOH . H 4 HOH B 46 346 13 HOH HOH . H 4 HOH B 47 347 20 HOH HOH . H 4 HOH B 48 348 22 HOH HOH . H 4 HOH B 49 349 25 HOH HOH . H 4 HOH B 50 350 26 HOH HOH . H 4 HOH B 51 351 32 HOH HOH . H 4 HOH B 52 352 37 HOH HOH . H 4 HOH B 53 353 39 HOH HOH . H 4 HOH B 54 354 41 HOH HOH . H 4 HOH B 55 355 43 HOH HOH . H 4 HOH B 56 356 45 HOH HOH . H 4 HOH B 57 357 49 HOH HOH . H 4 HOH B 58 358 51 HOH HOH . H 4 HOH B 59 359 53 HOH HOH . H 4 HOH B 60 360 54 HOH HOH . H 4 HOH B 61 361 57 HOH HOH . H 4 HOH B 62 362 59 HOH HOH . H 4 HOH B 63 363 64 HOH HOH . H 4 HOH B 64 364 65 HOH HOH . H 4 HOH B 65 365 66 HOH HOH . H 4 HOH B 66 366 67 HOH HOH . H 4 HOH B 67 367 71 HOH HOH . H 4 HOH B 68 368 72 HOH HOH . H 4 HOH B 69 369 76 HOH HOH . H 4 HOH B 70 370 77 HOH HOH . H 4 HOH B 71 371 80 HOH HOH . H 4 HOH B 72 372 88 HOH HOH . H 4 HOH B 73 373 98 HOH HOH . H 4 HOH B 74 374 99 HOH HOH . H 4 HOH B 75 375 100 HOH HOH . H 4 HOH B 76 376 102 HOH HOH . H 4 HOH B 77 377 103 HOH HOH . H 4 HOH B 78 378 106 HOH HOH . H 4 HOH B 79 379 107 HOH HOH . H 4 HOH B 80 380 108 HOH HOH . H 4 HOH B 81 381 109 HOH HOH . H 4 HOH B 82 382 110 HOH HOH . H 4 HOH B 83 383 112 HOH HOH . H 4 HOH B 84 384 115 HOH HOH . H 4 HOH B 85 385 116 HOH HOH . H 4 HOH B 86 386 117 HOH HOH . H 4 HOH B 87 387 118 HOH HOH . H 4 HOH B 88 388 122 HOH HOH . H 4 HOH B 89 389 124 HOH HOH . H 4 HOH B 90 390 125 HOH HOH . H 4 HOH B 91 391 128 HOH HOH . H 4 HOH B 92 392 131 HOH HOH . H 4 HOH B 93 393 138 HOH HOH . H 4 HOH B 94 394 140 HOH HOH . H 4 HOH B 95 395 142 HOH HOH . H 4 HOH B 96 396 145 HOH HOH . H 4 HOH B 97 397 147 HOH HOH . H 4 HOH B 98 398 149 HOH HOH . H 4 HOH B 99 399 150 HOH HOH . H 4 HOH B 100 400 151 HOH HOH . H 4 HOH B 101 401 155 HOH HOH . H 4 HOH B 102 402 159 HOH HOH . H 4 HOH B 103 403 160 HOH HOH . H 4 HOH B 104 404 163 HOH HOH . H 4 HOH B 105 405 165 HOH HOH . H 4 HOH B 106 406 176 HOH HOH . H 4 HOH B 107 407 177 HOH HOH . H 4 HOH B 108 408 178 HOH HOH . H 4 HOH B 109 409 180 HOH HOH . H 4 HOH B 110 410 188 HOH HOH . H 4 HOH B 111 411 194 HOH HOH . H 4 HOH B 112 412 196 HOH HOH . H 4 HOH B 113 413 199 HOH HOH . H 4 HOH B 114 414 204 HOH HOH . H 4 HOH B 115 415 215 HOH HOH . H 4 HOH B 116 416 216 HOH HOH . H 4 HOH B 117 417 217 HOH HOH . H 4 HOH B 118 418 218 HOH HOH . H 4 HOH B 119 419 219 HOH HOH . H 4 HOH B 120 420 220 HOH HOH . H 4 HOH B 121 421 223 HOH HOH . H 4 HOH B 122 422 225 HOH HOH . H 4 HOH B 123 423 229 HOH HOH . H 4 HOH B 124 424 234 HOH HOH . H 4 HOH B 125 425 235 HOH HOH . H 4 HOH B 126 426 236 HOH HOH . H 4 HOH B 127 427 237 HOH HOH . H 4 HOH B 128 428 239 HOH HOH . H 4 HOH B 129 429 246 HOH HOH . H 4 HOH B 130 430 247 HOH HOH . H 4 HOH B 131 431 248 HOH HOH . H 4 HOH B 132 432 249 HOH HOH . H 4 HOH B 133 433 252 HOH HOH . H 4 HOH B 134 434 253 HOH HOH . H 4 HOH B 135 435 266 HOH HOH . H 4 HOH B 136 436 268 HOH HOH . H 4 HOH B 137 437 274 HOH HOH . H 4 HOH B 138 438 275 HOH HOH . H 4 HOH B 139 439 276 HOH HOH . H 4 HOH B 140 440 278 HOH HOH . H 4 HOH B 141 441 279 HOH HOH . H 4 HOH B 142 442 285 HOH HOH . H 4 HOH B 143 443 297 HOH HOH . H 4 HOH B 144 444 299 HOH HOH . H 4 HOH B 145 445 305 HOH HOH . H 4 HOH B 146 446 307 HOH HOH . H 4 HOH B 147 447 309 HOH HOH . H 4 HOH B 148 448 310 HOH HOH . H 4 HOH B 149 449 311 HOH HOH . H 4 HOH B 150 450 313 HOH HOH . H 4 HOH B 151 451 320 HOH HOH . H 4 HOH B 152 452 321 HOH HOH . H 4 HOH B 153 453 323 HOH HOH . H 4 HOH B 154 454 326 HOH HOH . H 4 HOH B 155 455 331 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . C 2 48.321 14.245 24.006 1 11.55 ? PB GDP 201 A 1 HETATM 2 O O1B GDP . . . C 2 48.123 13.538 22.684 1 14.94 ? O1B GDP 201 A 1 HETATM 3 O O2B GDP . . . C 2 49.787 14.318 24.359 1 11.29 ? O2B GDP 201 A 1 HETATM 4 O O3B GDP . . . C 2 47.564 13.553 25.119 1 14.6 ? O3B GDP 201 A 1 HETATM 5 O O3A GDP . . . C 2 47.842 15.79 23.909 1 12.14 ? O3A GDP 201 A 1 HETATM 6 P PA GDP . . . C 2 46.736 16.37 22.902 1 11.35 ? PA GDP 201 A 1 HETATM 7 O O1A GDP . . . C 2 47.357 16.596 21.522 1 17.52 ? O1A GDP 201 A 1 HETATM 8 O O2A GDP . . . C 2 45.529 15.48 22.856 1 12.98 ? O2A GDP 201 A 1 HETATM 9 O O5' GDP . . . C 2 46.514 17.849 23.523 1 13.87 ? O5' GDP 201 A 1 HETATM 10 C C5' GDP . . . C 2 46.07 18.078 24.859 1 11.29 ? C5' GDP 201 A 1 HETATM 11 C C4' GDP . . . C 2 45.401 19.439 24.955 1 15.05 ? C4' GDP 201 A 1 HETATM 12 O O4' GDP . . . C 2 46.377 20.481 24.888 1 15.14 ? O4' GDP 201 A 1 HETATM 13 C C3' GDP . . . C 2 44.468 19.642 23.766 1 19.26 ? C3' GDP 201 A 1 HETATM 14 O O3' GDP . . . C 2 43.34 20.386 24.225 1 26.61 ? O3' GDP 201 A 1 HETATM 15 C C2' GDP . . . C 2 45.24 20.504 22.807 1 17.58 ? C2' GDP 201 A 1 HETATM 16 O O2' GDP . . . C 2 44.423 21.319 21.937 1 20.55 ? O2' GDP 201 A 1 HETATM 17 C C1' GDP . . . C 2 46.072 21.32 23.771 1 15.13 ? C1' GDP 201 A 1 HETATM 18 N N9 GDP . . . C 2 47.332 21.699 23.122 1 10.11 ? N9 GDP 201 A 1 HETATM 19 C C8 GDP . . . C 2 48.194 20.904 22.458 1 18.19 ? C8 GDP 201 A 1 HETATM 20 N N7 GDP . . . C 2 49.248 21.625 22.01 1 16.89 ? N7 GDP 201 A 1 HETATM 21 C C5 GDP . . . C 2 49.065 22.9 22.424 1 19.3 ? C5 GDP 201 A 1 HETATM 22 C C6 GDP . . . C 2 49.794 24.174 22.317 1 22.65 ? C6 GDP 201 A 1 HETATM 23 O O6 GDP . . . C 2 50.892 24.246 21.702 1 19.09 ? O6 GDP 201 A 1 HETATM 24 N N1 GDP . . . C 2 49.235 25.246 22.902 1 17.99 ? N1 GDP 201 A 1 HETATM 25 C C2 GDP . . . C 2 48.062 25.214 23.568 1 22.36 ? C2 GDP 201 A 1 HETATM 26 N N2 GDP . . . C 2 47.59 26.355 24.123 1 24.48 ? N2 GDP 201 A 1 HETATM 27 N N3 GDP . . . C 2 47.332 24.079 23.713 1 14.09 ? N3 GDP 201 A 1 HETATM 28 C C4 GDP . . . C 2 47.794 22.933 23.156 1 13.22 ? C4 GDP 201 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 426 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #