data_4Y49 # _model_server_result.job_id QeM42X88dPhR8dDzgxlLzg _model_server_result.datetime_utc '2024-11-18 13:25:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y49 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":201}' # _entry.id 4Y49 # _exptl.entry_id 4Y49 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Y49 _cell.length_a 111.723 _cell.length_b 146.486 _cell.length_c 254.107 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y49 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 ? tetrameric 4 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,M,N,O 1 1 E,F,G,H,P,Q,R 2 1 I,J,K,L,S,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 O N N ? 7 R N N ? 7 U N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 4Y49 _atom_sites.fract_transf_matrix[1][1] 0.008951 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 5 G4P A 1 901 1 G4P G4P . N 6 CMC B 1 301 1 CMC ACO . O 7 ACO C 1 201 1 ACO BCO . P 5 G4P G 1 901 2 G4P G4P . Q 6 CMC H 1 301 1 CMC ACO . R 7 ACO I 1 201 1 ACO BCO . S 5 G4P M 1 901 3 G4P G4P . T 6 CMC N 1 301 1 CMC ACO . U 7 ACO O 1 201 1 ACO BCO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . O 7 -21.306 84.625 563.767 1 88.76 ? N1A ACO 201 C 1 HETATM 2 C C2A ACO . . . O 7 -21.527 85.96 563.792 1 88.91 ? C2A ACO 201 C 1 HETATM 3 N N3A ACO . . . O 7 -20.728 86.833 564.462 1 88.85 ? N3A ACO 201 C 1 HETATM 4 C C4A ACO . . . O 7 -19.632 86.419 565.177 1 88.63 ? C4A ACO 201 C 1 HETATM 5 C C5A ACO . . . O 7 -19.331 84.976 565.175 1 88.46 ? C5A ACO 201 C 1 HETATM 6 C C6A ACO . . . O 7 -20.248 84.07 564.423 1 88.54 ? C6A ACO 201 C 1 HETATM 7 N N6A ACO . . . O 7 -20.002 82.732 564.412 1 88.39 ? N6A ACO 201 C 1 HETATM 8 N N7A ACO . . . O 7 -18.224 84.825 565.929 1 88.27 ? N7A ACO 201 C 1 HETATM 9 C C8A ACO . . . O 7 -17.821 86.042 566.378 1 88.31 ? C8A ACO 201 C 1 HETATM 10 N N9A ACO . . . O 7 -18.665 87.007 565.927 1 88.52 ? N9A ACO 201 C 1 HETATM 11 C C1B ACO . . . O 7 -18.569 88.485 566.162 1 88.63 ? C1B ACO 201 C 1 HETATM 12 C C2B ACO . . . O 7 -17.634 88.911 567.301 1 88.52 ? C2B ACO 201 C 1 HETATM 13 O O2B ACO . . . O 7 -18.345 89.03 568.531 1 88.7 ? O2B ACO 201 C 1 HETATM 14 C C3B ACO . . . O 7 -17.098 90.243 566.821 1 88.52 ? C3B ACO 201 C 1 HETATM 15 O O3B ACO . . . O 7 -17.922 91.272 567.362 1 88.77 ? O3B ACO 201 C 1 HETATM 16 P P3B ACO . . . O 7 -17.298 92.723 567.678 1 88.78 ? P3B ACO 201 C 1 HETATM 17 O O7A ACO . . . O 7 -16.248 92.485 568.759 1 88.6 ? O7A ACO 201 C 1 HETATM 18 O O8A ACO . . . O 7 -18.476 93.603 568.053 1 89.08 ? O8A ACO 201 C 1 HETATM 19 O O9A ACO . . . O 7 -16.722 93.112 566.347 1 88.67 ? O9A ACO 201 C 1 HETATM 20 C C4B ACO . . . O 7 -17.169 90.195 565.283 1 88.49 ? C4B ACO 201 C 1 HETATM 21 O O4B ACO . . . O 7 -18.111 89.161 564.954 1 88.57 ? O4B ACO 201 C 1 HETATM 22 C C5B ACO . . . O 7 -15.822 89.907 564.606 1 88.21 ? C5B ACO 201 C 1 HETATM 23 O O5B ACO . . . O 7 -15.306 88.721 565.206 1 88.04 ? O5B ACO 201 C 1 HETATM 24 P P1A ACO . . . O 7 -13.896 87.967 564.96 1 87.74 ? P1A ACO 201 C 1 HETATM 25 O O1A ACO . . . O 7 -14.147 86.655 564.238 1 87.67 ? O1A ACO 201 C 1 HETATM 26 O O2A ACO . . . O 7 -13.275 88.024 566.336 1 87.68 ? O2A ACO 201 C 1 HETATM 27 O O3A ACO . . . O 7 -12.901 88.962 564.179 1 87.64 ? O3A ACO 201 C 1 HETATM 28 P P2A ACO . . . O 7 -12.484 88.481 562.735 1 87.51 ? P2A ACO 201 C 1 HETATM 29 O O4A ACO . . . O 7 -13.883 88.654 562.215 1 87.75 ? O4A ACO 201 C 1 HETATM 30 O O5A ACO . . . O 7 -11.765 87.145 562.892 1 87.3 ? O5A ACO 201 C 1 HETATM 31 O O6A ACO . . . O 7 -11.662 89.635 561.945 1 87.46 ? O6A ACO 201 C 1 HETATM 32 C CBP ACO . . . O 7 -9.531 90.38 561.046 1 87.19 ? CBP ACO 201 C 1 HETATM 33 C CCP ACO . . . O 7 -10.388 90.141 562.279 1 87.31 ? CCP ACO 201 C 1 HETATM 34 C CDP ACO . . . O 7 -8.279 91.084 561.55 1 87.06 ? CDP ACO 201 C 1 HETATM 35 C CEP ACO . . . O 7 -9.151 89.022 560.505 1 87.03 ? CEP ACO 201 C 1 HETATM 36 C CAP ACO . . . O 7 -10.353 91.212 560.004 1 87.38 ? CAP ACO 201 C 1 HETATM 37 O OAP ACO . . . O 7 -10.418 92.552 560.505 1 87.5 ? OAP ACO 201 C 1 HETATM 38 C C9P ACO . . . O 7 -10.013 91.188 558.477 1 87.32 ? C9P ACO 201 C 1 HETATM 39 O O9P ACO . . . O 7 -10.739 90.556 557.676 1 87.39 ? O9P ACO 201 C 1 HETATM 40 N N8P ACO . . . O 7 -8.947 91.815 557.927 1 87.22 ? N8P ACO 201 C 1 HETATM 41 C C7P ACO . . . O 7 -7.853 92.419 558.663 1 87.1 ? C7P ACO 201 C 1 HETATM 42 C C6P ACO . . . O 7 -7.087 93.564 557.998 1 87.09 ? C6P ACO 201 C 1 HETATM 43 C C5P ACO . . . O 7 -5.979 94.056 558.919 1 86.97 ? C5P ACO 201 C 1 HETATM 44 O O5P ACO . . . O 7 -5.704 95.259 558.915 1 87.03 ? O5P ACO 201 C 1 HETATM 45 N N4P ACO . . . O 7 -5.372 93.142 559.717 1 86.81 ? N4P ACO 201 C 1 HETATM 46 C C3P ACO . . . O 7 -4.416 93.489 560.723 1 86.7 ? C3P ACO 201 C 1 HETATM 47 C C2P ACO . . . O 7 -3.086 93.634 560.027 1 86.54 ? C2P ACO 201 C 1 HETATM 48 S S1P ACO . . . O 7 -1.837 93.333 561.213 1 86.36 ? S1P ACO 201 C 1 HETATM 49 C C ACO . . . O 7 -0.447 94.174 560.757 1 86.25 ? C ACO 201 C 1 HETATM 50 O O ACO . . . O 7 0.582 93.903 561.339 1 86.1 ? O ACO 201 C 1 HETATM 51 C CH3 ACO . . . O 7 -0.404 95.234 559.686 1 86.33 ? CH3 ACO 201 C 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 50 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 51 #