data_4Y49 # _model_server_result.job_id tYlaxZXgpzjzPFMYtFdz5A _model_server_result.datetime_utc '2024-11-18 13:43:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4y49 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":201}' # _entry.id 4Y49 # _exptl.entry_id 4Y49 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Y49 _cell.length_a 111.723 _cell.length_b 146.486 _cell.length_c 254.107 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Y49 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 ? tetrameric 4 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,M,N,O 1 1 E,F,G,H,P,Q,R 2 1 I,J,K,L,S,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 O N N ? 7 R N N ? 7 U N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 4Y49 _atom_sites.fract_transf_matrix[1][1] 0.008951 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 5 G4P A 1 901 1 G4P G4P . N 6 CMC B 1 301 1 CMC ACO . O 7 ACO C 1 201 1 ACO BCO . P 5 G4P G 1 901 2 G4P G4P . Q 6 CMC H 1 301 1 CMC ACO . R 7 ACO I 1 201 1 ACO BCO . S 5 G4P M 1 901 3 G4P G4P . T 6 CMC N 1 301 1 CMC ACO . U 7 ACO O 1 201 1 ACO BCO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . R 7 20.857 11.679 494.859 1 87.2 ? N1A ACO 201 I 1 HETATM 2 C C2A ACO . . . R 7 20.941 13.005 495.125 1 87.18 ? C2A ACO 201 I 1 HETATM 3 N N3A ACO . . . R 7 20.181 13.924 494.47 1 87.24 ? N3A ACO 201 I 1 HETATM 4 C C4A ACO . . . R 7 19.289 13.566 493.465 1 87.32 ? C4A ACO 201 I 1 HETATM 5 C C5A ACO . . . R 7 19.151 12.124 493.093 1 87.34 ? C5A ACO 201 I 1 HETATM 6 C C6A ACO . . . R 7 20.008 11.174 493.904 1 87.27 ? C6A ACO 201 I 1 HETATM 7 N N6A ACO . . . R 7 19.954 9.834 493.666 1 87.28 ? N6A ACO 201 I 1 HETATM 8 N N7A ACO . . . R 7 18.214 12.022 492.098 1 87.43 ? N7A ACO 201 I 1 HETATM 9 C C8A ACO . . . R 7 17.777 13.274 491.858 1 87.46 ? C8A ACO 201 I 1 HETATM 10 N N9A ACO . . . R 7 18.408 14.2 492.65 1 87.4 ? N9A ACO 201 I 1 HETATM 11 C C1B ACO . . . R 7 18.205 15.68 492.6 1 87.43 ? C1B ACO 201 I 1 HETATM 12 C C2B ACO . . . R 7 17.292 16.111 491.431 1 87.56 ? C2B ACO 201 I 1 HETATM 13 O O2B ACO . . . R 7 18.083 16.582 490.323 1 87.81 ? O2B ACO 201 I 1 HETATM 14 C C3B ACO . . . R 7 16.299 17.099 492.045 1 87.43 ? C3B ACO 201 I 1 HETATM 15 O O3B ACO . . . R 7 16.286 18.405 491.399 1 87.58 ? O3B ACO 201 I 1 HETATM 16 P P3B ACO . . . R 7 17.399 19.6 491.367 1 87.68 ? P3B ACO 201 I 1 HETATM 17 O O7A ACO . . . R 7 16.877 20.501 490.184 1 87.88 ? O7A ACO 201 I 1 HETATM 18 O O8A ACO . . . R 7 18.783 18.932 491.226 1 87.77 ? O8A ACO 201 I 1 HETATM 19 O O9A ACO . . . R 7 17.164 20.332 492.74 1 87.47 ? O9A ACO 201 I 1 HETATM 20 C C4B ACO . . . R 7 16.584 17.096 493.548 1 87.21 ? C4B ACO 201 I 1 HETATM 21 O O4B ACO . . . R 7 17.652 16.187 493.827 1 87.21 ? O4B ACO 201 I 1 HETATM 22 C C5B ACO . . . R 7 15.396 16.651 494.404 1 87.01 ? C5B ACO 201 I 1 HETATM 23 O O5B ACO . . . R 7 14.714 15.48 493.868 1 87.02 ? O5B ACO 201 I 1 HETATM 24 P P1A ACO . . . R 7 13.936 14.494 494.872 1 86.81 ? P1A ACO 201 I 1 HETATM 25 O O1A ACO . . . R 7 14.819 14.331 496.07 1 86.68 ? O1A ACO 201 I 1 HETATM 26 O O2A ACO . . . R 7 13.435 13.289 494.118 1 86.86 ? O2A ACO 201 I 1 HETATM 27 O O3A ACO . . . R 7 12.722 15.406 495.376 1 86.7 ? O3A ACO 201 I 1 HETATM 28 P P2A ACO . . . R 7 11.912 14.971 496.708 1 86.46 ? P2A ACO 201 I 1 HETATM 29 O O4A ACO . . . R 7 12.307 15.673 497.955 1 86.33 ? O4A ACO 201 I 1 HETATM 30 O O5A ACO . . . R 7 11.721 13.475 496.556 1 86.44 ? O5A ACO 201 I 1 HETATM 31 O O6A ACO . . . R 7 10.597 15.802 496.4 1 86.48 ? O6A ACO 201 I 1 HETATM 32 C CBP ACO . . . R 7 9.54 17.627 497.614 1 86.33 ? CBP ACO 201 I 1 HETATM 33 C CCP ACO . . . R 7 10.595 17.223 496.568 1 86.5 ? CCP ACO 201 I 1 HETATM 34 C CDP ACO . . . R 7 8.611 18.659 496.966 1 86.43 ? CDP ACO 201 I 1 HETATM 35 C CEP ACO . . . R 7 8.637 16.467 497.992 1 86.22 ? CEP ACO 201 I 1 HETATM 36 C CAP ACO . . . R 7 10.338 18.238 498.8 1 86.21 ? CAP ACO 201 I 1 HETATM 37 O OAP ACO . . . R 7 10.621 19.593 498.356 1 86.32 ? OAP ACO 201 I 1 HETATM 38 C C9P ACO . . . R 7 9.868 18.153 500.277 1 86 ? C9P ACO 201 I 1 HETATM 39 O O9P ACO . . . R 7 10.573 17.496 501.07 1 85.9 ? O9P ACO 201 I 1 HETATM 40 N N8P ACO . . . R 7 8.754 18.712 500.823 1 85.91 ? N8P ACO 201 I 1 HETATM 41 C C7P ACO . . . R 7 7.641 19.253 500.071 1 86 ? C7P ACO 201 I 1 HETATM 42 C C6P ACO . . . R 7 6.975 20.579 500.467 1 85.98 ? C6P ACO 201 I 1 HETATM 43 C C5P ACO . . . R 7 5.749 20.896 499.616 1 86.09 ? C5P ACO 201 I 1 HETATM 44 O O5P ACO . . . R 7 5.319 22.097 499.691 1 86.12 ? O5P ACO 201 I 1 HETATM 45 N N4P ACO . . . R 7 5.196 19.841 498.857 1 86.15 ? N4P ACO 201 I 1 HETATM 46 C C3P ACO . . . R 7 4.092 20.033 497.967 1 86.27 ? C3P ACO 201 I 1 HETATM 47 C C2P ACO . . . R 7 2.87 20.279 498.834 1 86.15 ? C2P ACO 201 I 1 HETATM 48 S S1P ACO . . . R 7 1.528 19.902 497.772 1 86.28 ? S1P ACO 201 I 1 HETATM 49 C C ACO . . . R 7 0.175 20.929 497.989 1 86.31 ? C ACO 201 I 1 HETATM 50 O O ACO . . . R 7 -0.875 20.587 497.426 1 86.38 ? O ACO 201 I 1 HETATM 51 C CH3 ACO . . . R 7 0.18 22.229 498.781 1 86.26 ? CH3 ACO 201 I 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 51 #